BLASTX nr result

ID: Coptis24_contig00004181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004181
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145344.1| PREDICTED: mitochondrial import receptor sub...    67   2e-09
ref|XP_002305407.1| predicted protein [Populus trichocarpa] gi|1...    65   6e-09
ref|XP_002313822.1| predicted protein [Populus trichocarpa] gi|1...    63   3e-08
ref|XP_002519115.1| conserved hypothetical protein [Ricinus comm...    62   5e-08
ref|XP_002894180.1| hypothetical protein ARALYDRAFT_891816 [Arab...    61   8e-08

>ref|XP_004145344.1| PREDICTED: mitochondrial import receptor subunit TOM6 homolog
           [Cucumis sativus] gi|449455208|ref|XP_004145345.1|
           PREDICTED: mitochondrial import receptor subunit TOM6
           homolog [Cucumis sativus]
           gi|449474805|ref|XP_004154290.1| PREDICTED:
           mitochondrial import receptor subunit TOM6 homolog
           [Cucumis sativus] gi|449474809|ref|XP_004154291.1|
           PREDICTED: mitochondrial import receptor subunit TOM6
           homolog [Cucumis sativus]
           gi|449532212|ref|XP_004173076.1| PREDICTED:
           mitochondrial import receptor subunit TOM6 homolog
           [Cucumis sativus] gi|449532214|ref|XP_004173077.1|
           PREDICTED: mitochondrial import receptor subunit TOM6
           homolog [Cucumis sativus]
          Length = 54

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/54 (59%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
 Frame = +3

Query: 15  MFLGQ-MRKPDKEKALKELKSHVVLFGVYVAFVRAIPYVLNYIYQEPQELSLEF 173
           MF G  MRKPDK  ALK+L+SHV +FGV+VA +R  PYVL+Y+  E +EL L+F
Sbjct: 1   MFPGMFMRKPDKAAALKQLRSHVAMFGVWVAVIRVTPYVLHYLSDEKEELKLDF 54


>ref|XP_002305407.1| predicted protein [Populus trichocarpa] gi|118484423|gb|ABK94088.1|
           unknown [Populus trichocarpa]
           gi|222848371|gb|EEE85918.1| predicted protein [Populus
           trichocarpa]
          Length = 54

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/54 (59%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
 Frame = +3

Query: 15  MFLGQ-MRKPDKEKALKELKSHVVLFGVYVAFVRAIPYVLNYIYQEPQELSLEF 173
           MF G  MRKPDK +ALK+LKSHV +FG +V  +R  PYVL+Y+  E  EL LEF
Sbjct: 1   MFPGMFMRKPDKAEALKQLKSHVAMFGAWVVVLRVTPYVLHYLSDEKDELKLEF 54


>ref|XP_002313822.1| predicted protein [Populus trichocarpa] gi|118483621|gb|ABK93705.1|
           unknown [Populus trichocarpa]
           gi|222850230|gb|EEE87777.1| predicted protein [Populus
           trichocarpa]
          Length = 54

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = +3

Query: 30  MRKPDKEKALKELKSHVVLFGVYVAFVRAIPYVLNYIYQEPQELSLEF 173
           M+KPDK +ALK+L+SHV +FG +V  +R  PYVL+YI  E  EL LEF
Sbjct: 7   MKKPDKAEALKQLRSHVAMFGAWVVVLRVTPYVLHYISHEKDELKLEF 54


>ref|XP_002519115.1| conserved hypothetical protein [Ricinus communis]
           gi|223541778|gb|EEF43326.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 54

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
 Frame = +3

Query: 15  MFLGQ-MRKPDKEKALKELKSHVVLFGVYVAFVRAIPYVLNYIYQEPQELSLEF 173
           MF G  MRKPDK  ALK+LK+H  +FG +VA +R  PYVL+Y+  +  EL L+F
Sbjct: 1   MFPGMFMRKPDKAAALKQLKTHAAIFGAWVALIRVTPYVLHYLSDDKDELKLDF 54


>ref|XP_002894180.1| hypothetical protein ARALYDRAFT_891816 [Arabidopsis lyrata subsp.
           lyrata] gi|297340022|gb|EFH70439.1| hypothetical protein
           ARALYDRAFT_891816 [Arabidopsis lyrata subsp. lyrata]
          Length = 54

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/54 (55%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
 Frame = +3

Query: 15  MFLGQ-MRKPDKEKALKELKSHVVLFGVYVAFVRAIPYVLNYIYQEPQELSLEF 173
           MF G  MRKPDK  ALK+L++HV LFG +V  VRA+PYVL+Y      EL ++F
Sbjct: 1   MFPGMFMRKPDKAVALKQLRTHVALFGGWVVIVRAVPYVLSYFSDSKDELKIDF 54


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