BLASTX nr result

ID: Coptis24_contig00004179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004179
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317239.1| predicted protein [Populus trichocarpa] gi|2...   191   1e-75
ref|XP_002521428.1| beta-galactosidase, putative [Ricinus commun...   189   3e-74
gb|ABK24373.1| unknown [Picea sitchensis]                             177   3e-66
ref|XP_002285084.2| PREDICTED: beta-galactosidase 8-like [Vitis ...   174   1e-63
ref|XP_003543462.1| PREDICTED: beta-galactosidase 8-like isoform...   173   2e-63

>ref|XP_002317239.1| predicted protein [Populus trichocarpa] gi|222860304|gb|EEE97851.1|
           predicted protein [Populus trichocarpa]
          Length = 849

 Score =  191 bits (485), Expect(2) = 1e-75
 Identities = 85/94 (90%), Positives = 88/94 (93%)
 Frame = -1

Query: 284 INTCNGFYCDEFTPNSPSKPKMWTENYVGWFLAFGYAHPFRPDEDLAFAVTRFFGKGGTF 105
           INTCNGFYCD+FTPNSPSKPKMWTENY GWFLAFGYA P+RP EDLAFAV RFF  GG+F
Sbjct: 237 INTCNGFYCDQFTPNSPSKPKMWTENYSGWFLAFGYAVPYRPVEDLAFAVARFFEYGGSF 296

Query: 104 QNYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEY 3
           QNYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEY
Sbjct: 297 QNYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEY 330



 Score =  117 bits (294), Expect(2) = 1e-75
 Identities = 51/63 (80%), Positives = 61/63 (96%)
 Frame = -2

Query: 580 KIVNMMKEEKLFASQGGPIILAQVENEYGNIQWAYGIGGDQYVQWAAKTALSLNTTVPWV 401
           KIV++MK++ LFASQGGPIILAQVENEYGN+QWAYG+GG+ YV+WAA+TA+SLNTTVPWV
Sbjct: 166 KIVDLMKDDNLFASQGGPIILAQVENEYGNVQWAYGVGGELYVKWAAETAISLNTTVPWV 225

Query: 400 MCV 392
           MCV
Sbjct: 226 MCV 228


>ref|XP_002521428.1| beta-galactosidase, putative [Ricinus communis]
           gi|223539327|gb|EEF40918.1| beta-galactosidase, putative
           [Ricinus communis]
          Length = 841

 Score =  189 bits (481), Expect(2) = 3e-74
 Identities = 84/94 (89%), Positives = 87/94 (92%)
 Frame = -1

Query: 284 INTCNGFYCDEFTPNSPSKPKMWTENYVGWFLAFGYAHPFRPDEDLAFAVTRFFGKGGTF 105
           INTCNGFYCD F+PNSPSKPKMWTENY GWFL+FGYA P+RP EDLAFAV RFF  GGTF
Sbjct: 231 INTCNGFYCDRFSPNSPSKPKMWTENYSGWFLSFGYAIPYRPVEDLAFAVARFFETGGTF 290

Query: 104 QNYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEY 3
           QNYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEY
Sbjct: 291 QNYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEY 324



 Score =  114 bits (286), Expect(2) = 3e-74
 Identities = 51/62 (82%), Positives = 58/62 (93%)
 Frame = -2

Query: 580 KIVNMMKEEKLFASQGGPIILAQVENEYGNIQWAYGIGGDQYVQWAAKTALSLNTTVPWV 401
           KIVNMMKEE LFASQGGPIILAQVENEYGN++WAYG  G+ YV+WAA+TA+SLNT+VPWV
Sbjct: 160 KIVNMMKEENLFASQGGPIILAQVENEYGNVEWAYGAAGELYVKWAAETAVSLNTSVPWV 219

Query: 400 MC 395
           MC
Sbjct: 220 MC 221


>gb|ABK24373.1| unknown [Picea sitchensis]
          Length = 861

 Score =  177 bits (450), Expect(2) = 3e-66
 Identities = 77/94 (81%), Positives = 83/94 (88%)
 Frame = -1

Query: 284 INTCNGFYCDEFTPNSPSKPKMWTENYVGWFLAFGYAHPFRPDEDLAFAVTRFFGKGGTF 105
           INTCNGFYCD FTPNSP+KPKMWTEN+ GWFL+FG   PFRP EDLAF+V RFF +GGTF
Sbjct: 232 INTCNGFYCDAFTPNSPNKPKMWTENWSGWFLSFGGRLPFRPTEDLAFSVARFFQRGGTF 291

Query: 104 QNYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEY 3
           QNYYMY GGTNFGRT GGP +ATSYDYDAPIDEY
Sbjct: 292 QNYYMYHGGTNFGRTTGGPFIATSYDYDAPIDEY 325



 Score =  100 bits (248), Expect(2) = 3e-66
 Identities = 46/62 (74%), Positives = 51/62 (82%)
 Frame = -2

Query: 580 KIVNMMKEEKLFASQGGPIILAQVENEYGNIQWAYGIGGDQYVQWAAKTALSLNTTVPWV 401
           KIV+MMK+EKLFASQGGPIILAQ+ENEYGNI   YG  G  YV+WAA  A+ LNT VPWV
Sbjct: 161 KIVDMMKQEKLFASQGGPIILAQIENEYGNIDGPYGAAGKSYVKWAASMAVGLNTGVPWV 220

Query: 400 MC 395
           MC
Sbjct: 221 MC 222


>ref|XP_002285084.2| PREDICTED: beta-galactosidase 8-like [Vitis vinifera]
           gi|297746241|emb|CBI16297.3| unnamed protein product
           [Vitis vinifera]
          Length = 846

 Score =  174 bits (442), Expect(2) = 1e-63
 Identities = 76/94 (80%), Positives = 82/94 (87%)
 Frame = -1

Query: 284 INTCNGFYCDEFTPNSPSKPKMWTENYVGWFLAFGYAHPFRPDEDLAFAVTRFFGKGGTF 105
           INTCNGFYCD+FTPNS  KPKMWTEN+ GWFL+FG A P+RP ED+AFAV RFF  GGTF
Sbjct: 227 INTCNGFYCDQFTPNSVKKPKMWTENWTGWFLSFGGAVPYRPVEDIAFAVARFFQLGGTF 286

Query: 104 QNYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEY 3
           QNYYMY GGTNFGRT GGP +ATSYDYDAPIDEY
Sbjct: 287 QNYYMYHGGTNFGRTTGGPFIATSYDYDAPIDEY 320



 Score = 94.4 bits (233), Expect(2) = 1e-63
 Identities = 43/62 (69%), Positives = 50/62 (80%)
 Frame = -2

Query: 580 KIVNMMKEEKLFASQGGPIILAQVENEYGNIQWAYGIGGDQYVQWAAKTALSLNTTVPWV 401
           KIV+MMK+E L+ASQGGPIIL+Q+ENEYGNI  AYG     Y+QWAA  A SL+T VPWV
Sbjct: 156 KIVDMMKKENLYASQGGPIILSQIENEYGNIDSAYGSAAKSYIQWAASMATSLDTGVPWV 215

Query: 400 MC 395
           MC
Sbjct: 216 MC 217


>ref|XP_003543462.1| PREDICTED: beta-galactosidase 8-like isoform 1 [Glycine max]
          Length = 840

 Score =  173 bits (439), Expect(2) = 2e-63
 Identities = 76/94 (80%), Positives = 83/94 (88%)
 Frame = -1

Query: 284 INTCNGFYCDEFTPNSPSKPKMWTENYVGWFLAFGYAHPFRPDEDLAFAVTRFFGKGGTF 105
           INTCNGFYCD+FTPNS +KPKMWTEN+ GWFL FG A P+RP EDLAFAV RFF +GGTF
Sbjct: 227 INTCNGFYCDQFTPNSNTKPKMWTENWSGWFLPFGGAVPYRPVEDLAFAVARFFQRGGTF 286

Query: 104 QNYYMYFGGTNFGRTAGGPLVATSYDYDAPIDEY 3
           QNYYMY GGTNF RT+GGP +ATSYDYDAPIDEY
Sbjct: 287 QNYYMYHGGTNFDRTSGGPFIATSYDYDAPIDEY 320



 Score = 94.7 bits (234), Expect(2) = 2e-63
 Identities = 42/62 (67%), Positives = 51/62 (82%)
 Frame = -2

Query: 580 KIVNMMKEEKLFASQGGPIILAQVENEYGNIQWAYGIGGDQYVQWAAKTALSLNTTVPWV 401
           KIV+M+KEE L+ASQGGP+IL+Q+ENEYGNI  AYG  G  Y++WAA  A SL+T VPWV
Sbjct: 156 KIVDMIKEENLYASQGGPVILSQIENEYGNIDSAYGAAGKSYIKWAATMATSLDTGVPWV 215

Query: 400 MC 395
           MC
Sbjct: 216 MC 217


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