BLASTX nr result

ID: Coptis24_contig00004178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004178
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271833.2| PREDICTED: uncharacterized protein LOC100256...    98   6e-19
emb|CAN64499.1| hypothetical protein VITISV_043672 [Vitis vinifera]    98   6e-19
emb|CBI22919.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002314925.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_003594803.1| hypothetical protein MTR_2g034810 [Medicago ...    82   3e-14

>ref|XP_002271833.2| PREDICTED: uncharacterized protein LOC100256774 [Vitis vinifera]
          Length = 270

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 56/142 (39%), Positives = 74/142 (52%)
 Frame = +1

Query: 1   SSSTVRKDSNCRQPSPVSILEPCFSNESCNSSDSADSNRMIDXXXXXXXXXXXXXXXXRP 180
           S++  R   +CR PSPVSILEP FS ESCNSSDS DSN +                    
Sbjct: 8   SNAEARNLLDCRHPSPVSILEPSFSTESCNSSDSTDSNSIEGSKHFSSVLAQELISLSFS 67

Query: 181 KKFQXXXXXXXXXXXXXXTCTWNFSRECGTRFSMINVRKTEKRELGYVREVINNADLMFR 360
           KKF               T T   + +     +   + ++ K EL YV+E++ N +LMF+
Sbjct: 68  KKFNSMEADAELSDSASSTSTATVATKHVVALTATCLVRSTKWELEYVKEILCNIELMFK 127

Query: 361 DLALGRAHEMVNPHLFEMLENQ 426
           D ALGRA E++NPHLF  LEN+
Sbjct: 128 DFALGRAREIINPHLFHQLENR 149


>emb|CAN64499.1| hypothetical protein VITISV_043672 [Vitis vinifera]
          Length = 955

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 56/142 (39%), Positives = 74/142 (52%)
 Frame = +1

Query: 1    SSSTVRKDSNCRQPSPVSILEPCFSNESCNSSDSADSNRMIDXXXXXXXXXXXXXXXXRP 180
            S++  R   +CR PSPVSILEP FS ESCNSSDS DSN +                    
Sbjct: 693  SNAEARNLLDCRHPSPVSILEPSFSTESCNSSDSTDSNSIEGSKHFSSVLAQELISLSFS 752

Query: 181  KKFQXXXXXXXXXXXXXXTCTWNFSRECGTRFSMINVRKTEKRELGYVREVINNADLMFR 360
            KKF               T T   + +     +   + ++ K EL YV+E++ N +LMF+
Sbjct: 753  KKFNSMEADAELSDSASSTSTATVATKHVVALTATCLVRSTKWELEYVKEILCNIELMFK 812

Query: 361  DLALGRAHEMVNPHLFEMLENQ 426
            D ALGRA E++NPHLF  LEN+
Sbjct: 813  DFALGRAREIINPHLFHQLENR 834


>emb|CBI22919.3| unnamed protein product [Vitis vinifera]
          Length = 848

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 53/136 (38%), Positives = 70/136 (51%)
 Frame = +1

Query: 1    SSSTVRKDSNCRQPSPVSILEPCFSNESCNSSDSADSNRMIDXXXXXXXXXXXXXXXXRP 180
            S++  R   +CR PSPVSILEP FS ESCNSSDS DSN +                    
Sbjct: 647  SNAEARNLLDCRHPSPVSILEPSFSTESCNSSDSTDSNSIEGSKHFSSVLAQELISLSFS 706

Query: 181  KKFQXXXXXXXXXXXXXXTCTWNFSRECGTRFSMINVRKTEKRELGYVREVINNADLMFR 360
            KKF               T T   + +     +   + ++ K EL YV+E++ N +LMF+
Sbjct: 707  KKFNSMEADAELSDSASSTSTATVATKHVVALTATCLVRSTKWELEYVKEILCNIELMFK 766

Query: 361  DLALGRAHEMVNPHLF 408
            D ALGRA E++NPHLF
Sbjct: 767  DFALGRAREIINPHLF 782


>ref|XP_002314925.1| predicted protein [Populus trichocarpa] gi|222863965|gb|EEF01096.1|
            predicted protein [Populus trichocarpa]
          Length = 933

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 48/141 (34%), Positives = 71/141 (50%)
 Frame = +1

Query: 4    SSTVRKDSNCRQPSPVSILEPCFSNESCNSSDSADSNRMIDXXXXXXXXXXXXXXXXRPK 183
            S+  RK  +CR+PSPVS+LE  FS ES +S DSADS                       K
Sbjct: 672  SNDSRKFLDCRRPSPVSVLEHSFSTESSSSLDSADSCITEGSRHCSSIQVQEVHGLSSSK 731

Query: 184  KFQXXXXXXXXXXXXXXTCTWNFSRECGTRFSMINVRKTEKRELGYVREVINNADLMFRD 363
            KF               + T    R+     ++  + ++ K E+ YV++++ N +LMF+D
Sbjct: 732  KFHFVDVDTELSDSASSSSTGTVDRKHANMLAVTGLARSTKWEIEYVKKILCNIELMFQD 791

Query: 364  LALGRAHEMVNPHLFEMLENQ 426
             ALGRA +++NPHLF  LE +
Sbjct: 792  FALGRASKIINPHLFHQLERR 812


>ref|XP_003594803.1| hypothetical protein MTR_2g034810 [Medicago truncatula]
            gi|355483851|gb|AES65054.1| hypothetical protein
            MTR_2g034810 [Medicago truncatula]
          Length = 923

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 49/134 (36%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
 Frame = +1

Query: 28   NCRQPSPVSILEPCFSNESCNSSDSADSNRMIDXXXXXXXXXXXXXXXXRPKKFQXXXXX 207
            NCRQPSP+S+LEP FS ESC SS SAD   +                    +KF      
Sbjct: 670  NCRQPSPISVLEPSFSVESCESSMSADVTSIEGSKMFSSIQAQEIHGFNFSRKFYPTESD 729

Query: 208  XXXXXXXXXTCTWNFSRECGTRFSMINV-RKTEKRELGYVREVINNADLMFRDLALGRAH 384
                     T T    ++    FSM+   R +   EL YV+E++ N +LM+ D +LGR+ 
Sbjct: 730  AELSDSASSTSTTTMIKKQTGTFSMMKFGRSSTTWELDYVKEILCNVELMYMDFSLGRSR 789

Query: 385  EMVNPHLFEMLENQ 426
            E+VN HLF  LE++
Sbjct: 790  EVVNSHLFNQLESR 803


Top