BLASTX nr result
ID: Coptis24_contig00004157
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00004157
(1708 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283895.2| PREDICTED: F-box/LRR-repeat protein At5g6352... 485 e-134
emb|CAN79767.1| hypothetical protein VITISV_019403 [Vitis vinifera] 483 e-134
ref|XP_002322271.1| f-box family protein [Populus trichocarpa] g... 468 e-129
ref|XP_002318743.1| predicted protein [Populus trichocarpa] gi|2... 462 e-127
ref|XP_003523154.1| PREDICTED: F-box/LRR-repeat protein At5g6352... 432 e-118
>ref|XP_002283895.2| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Vitis vinifera]
gi|297734433|emb|CBI15680.3| unnamed protein product
[Vitis vinifera]
Length = 527
Score = 485 bits (1249), Expect = e-134
Identities = 268/517 (51%), Positives = 343/517 (66%), Gaps = 29/517 (5%)
Frame = -2
Query: 1587 INLIGEDTLEEILSRLPASSFASATCVNRSWSHLCNRILTKPKLVSALSLNPNLNVAVSE 1408
+ L+ ED L+ ILSRLPA SFA+A CV+RSW +L++PKL SA+SLNP+ AV E
Sbjct: 9 VALLSEDLLQNILSRLPALSFANAGCVSRSWRRAAGDVLSRPKLASAISLNPSFQDAVKE 68
Query: 1407 VVEKVLAQPIRPHFAIASIGSKFSLPATRKLIASRLGTGIPIIVSEAYGIIGKDVLTGHH 1228
V++ VL++PIRPHFAIA IG KFSL T KLI +LG+ P+I S A GIIG D +T
Sbjct: 69 VLDSVLSRPIRPHFAIACIGLKFSLERTHKLITKKLGSATPVITSVARGIIGSDAITEEF 128
Query: 1227 KEVNWLETDVDE---TGKNCAGIVLTVGFLPGLKVCSIPLMKTVEGPSQQSTIDKFVTDI 1057
KEV W DV++ GIVL VGF+PGLKV +IPL++ +E P S IDKFV DI
Sbjct: 129 KEVKW-GVDVEDFNLPANKDRGIVLIVGFMPGLKVDAIPLLRELEEPG-ISLIDKFVMDI 186
Query: 1056 KDYTASVSDCNSPVGIILFADRNADMGAVLEKMDCAMSKETIIIGDESNCFLWNDGEGFK 877
++++A+VS C SP GI++F D++ADM VLEKMD AMS ET+I+G+ES F++ G+ +
Sbjct: 187 RNFSAAVSGCTSPTGIVMFGDKHADMKPVLEKMDYAMSMETVILGEESGHFMYRSGDDSR 246
Query: 876 E---------DAIALVFATDRDKPGGIGEVHFSLALSTGVSPVGPVYKAASVRVVKDEEG 724
D +ALVFA D DKP G+GE F +ALSTGV PVGP +KAASV+ VK +
Sbjct: 247 NISGSLKNSCDGVALVFARDNDKPQGVGETQFHVALSTGVVPVGPTHKAASVK-VKGDGS 305
Query: 723 ICYTWLTARRKGSLEKLDGQVILEEI-DDMMSHASDNDLYIGVTKRRKCSVGSEKKKLVS 547
TWLTAR++G E LDG+ +L +I D+M + + +DLYIGVTKRRKCS+GSEK + V+
Sbjct: 306 ERSTWLTARKEGLKEALDGERLLHDIYDEMENENASHDLYIGVTKRRKCSIGSEKVRWVT 365
Query: 546 TLAFHEVSRGDEEYLYVVGDGIKTGDTFQFFYPYPEGALMSRNVVFDNLRALKQS----- 382
TL FH+V GDEEYL+V G GIKTGD F+F+ + AL S V + R LKQ+
Sbjct: 366 TLEFHDVLGGDEEYLFVDGVGIKTGDPFRFYRSDSDTALSSCRHVSEEFRNLKQAWTHKN 425
Query: 381 ---------NADKKVMCGGLIFSCCGRGESFLEQPNADSLAFSENFEGVSLSGVFCCGEI 229
DK +CGG+IFSC GRG+SF Q N DS F ENF G L+G+ C GEI
Sbjct: 426 SYHFRGVADGGDKTEVCGGIIFSCYGRGDSFFGQANVDSSPFLENFPGFPLAGIMCGGEI 485
Query: 228 GRSSVSIGQDNG--EQRSSNCFLHVYSTVYLLIMHTP 124
GR +S G E+ S +LH YSTVYL+I HTP
Sbjct: 486 GRVHLSSADHQGGQEESSPRSYLHYYSTVYLVISHTP 522
>emb|CAN79767.1| hypothetical protein VITISV_019403 [Vitis vinifera]
Length = 527
Score = 483 bits (1244), Expect = e-134
Identities = 268/517 (51%), Positives = 342/517 (66%), Gaps = 29/517 (5%)
Frame = -2
Query: 1587 INLIGEDTLEEILSRLPASSFASATCVNRSWSHLCNRILTKPKLVSALSLNPNLNVAVSE 1408
+ L+ ED L+ ILSRLPA SFA+A CV+RSW +L++PKL SA+SLNP+ AV E
Sbjct: 9 VALLSEDLLQNILSRLPALSFANAGCVSRSWRRAAGDVLSRPKLASAISLNPSFQDAVKE 68
Query: 1407 VVEKVLAQPIRPHFAIASIGSKFSLPATRKLIASRLGTGIPIIVSEAYGIIGKDVLTGHH 1228
V++ VL++PIRPHFAIA IG KFSL T KLI +LG+ P+I S A GIIG D +T
Sbjct: 69 VLDSVLSRPIRPHFAIACIGLKFSLERTHKLITKKLGSATPVITSVARGIIGSDAITEEF 128
Query: 1227 KEVNWLETDVDE---TGKNCAGIVLTVGFLPGLKVCSIPLMKTVEGPSQQSTIDKFVTDI 1057
KEV W DV++ GIVL VGF+PGLKV +IPL++ +E P S IDKFV DI
Sbjct: 129 KEVKW-GVDVEDFNLPANKDRGIVLIVGFMPGLKVDAIPLLRELEEPG-ISLIDKFVMDI 186
Query: 1056 KDYTASVSDCNSPVGIILFADRNADMGAVLEKMDCAMSKETIIIGDESNCFLWNDGEGFK 877
++++A+VS C SP GI++F D++ADM VLEKMD AMS ET+I+G+ES F++ G+ +
Sbjct: 187 RNFSAAVSGCTSPTGIVMFGDKHADMKPVLEKMDYAMSMETVILGEESGHFMYRSGDDSR 246
Query: 876 E---------DAIALVFATDRDKPGGIGEVHFSLALSTGVSPVGPVYKAASVRVVKDEEG 724
D +ALVFA D DKP G+GE F +ALSTGV PVGP KAASV+ VK +
Sbjct: 247 NISGSLKNSCDGVALVFARDNDKPQGVGESQFHVALSTGVVPVGPTLKAASVK-VKGDGS 305
Query: 723 ICYTWLTARRKGSLEKLDGQVILEEI-DDMMSHASDNDLYIGVTKRRKCSVGSEKKKLVS 547
TWLTAR++G E LDG+ +L +I D+M + + +DLYIGVTKRRKCS+GSEK + V+
Sbjct: 306 ERSTWLTARKEGLKEALDGERLLHDIYDEMENENASHDLYIGVTKRRKCSIGSEKVRWVT 365
Query: 546 TLAFHEVSRGDEEYLYVVGDGIKTGDTFQFFYPYPEGALMSRNVVFDNLRALKQS----- 382
TL FH+V GDEEYL+V G GIKTGD F+F+ + AL S V + R LKQ+
Sbjct: 366 TLEFHDVLGGDEEYLFVDGVGIKTGDPFRFYRSDSDTALSSCRHVSEEFRNLKQAWTHKN 425
Query: 381 ---------NADKKVMCGGLIFSCCGRGESFLEQPNADSLAFSENFEGVSLSGVFCCGEI 229
DK +CGG+IFSC GRG+SF Q N DS F ENF G L+G+ C GEI
Sbjct: 426 SYHFRGVADGGDKTEVCGGIIFSCYGRGDSFFGQANVDSSPFLENFPGFPLAGIMCGGEI 485
Query: 228 GRSSVSIGQDNG--EQRSSNCFLHVYSTVYLLIMHTP 124
GR +S G E+ S +LH YSTVYL+I HTP
Sbjct: 486 GRVHLSSADHQGGQEESSPRSYLHYYSTVYLVISHTP 522
>ref|XP_002322271.1| f-box family protein [Populus trichocarpa]
gi|222869267|gb|EEF06398.1| f-box family protein [Populus
trichocarpa]
Length = 533
Score = 468 bits (1204), Expect = e-129
Identities = 259/511 (50%), Positives = 333/511 (65%), Gaps = 26/511 (5%)
Frame = -2
Query: 1578 IGEDTLEEILSRLPASSFASATCVNRSWSHLCNRILTKPKLVSALSLNPNLNVAVSEVVE 1399
I ED + IL RLPA SFASA CV++SW+ +CN+IL KPK SA SLNP+ VA+ EVV
Sbjct: 22 INEDLILNILKRLPALSFASAACVSKSWNQICNQILYKPKFASAFSLNPDEKVALEEVVN 81
Query: 1398 KVLAQPIRPHFAIAS-IGSKFSLPATRKLIASRLGTGIPIIVSEAYGIIGKDVLTGHHKE 1222
KVL++PIRPHFAIA+ IGS L +A++LG PIIVS GI+G+D +T H+E
Sbjct: 82 KVLSEPIRPHFAIANVIGSGVDLSERLNFLATKLGFQTPIIVSCTSGIMGRDAVTDEHRE 141
Query: 1221 VNWLETDVDETGKNCAGIVLTVGFLPGLKVCSIPLMKTVEGPSQQSTIDKFVTDIKDYTA 1042
V E VD C GI+LTVGFLPGLKV +IPL + +G + + +D FV DIKDY
Sbjct: 142 VMLEEYWVDGESNPCNGIILTVGFLPGLKVDAIPLFQPRKG-CRATMVDNFVMDIKDYAT 200
Query: 1041 SVSDCNSPVGIILFADRNADMGAVLEKMDCAMSKETIIIGDESNCFLWNDGEGFKED--- 871
S+S C SPVGII+F D +AD V+EK+D AMS +TIIIGDE FL+ +G + D
Sbjct: 201 SISGCASPVGIIMFGDEDADQKPVMEKLDHAMSSDTIIIGDERAQFLYRNGVESRNDYES 260
Query: 870 ------AIALVFATDRDKPGGIGEVHFSLALSTGVSPVGPVYKAASVRVVKDEEGICYTW 709
A+ALVFA DRDKP G GE+ F ALS+GVS VGP YKA SV+ + G TW
Sbjct: 261 SEYFSAAVALVFARDRDKPCGTGEIQFHAALSSGVSAVGPRYKAVSVKKIVSGTGHT-TW 319
Query: 708 LTARRKGSLEKLDGQVILEEI-DDMMSHASDNDLYIGVTKRRKCSVGSEKKKLVSTLAFH 532
LTARR+G E DGQ IL++I +++++ DLYIGVT++R+C +GS+K ++++ L FH
Sbjct: 320 LTARREGEHEIQDGQRILDDINNELVNQVGHPDLYIGVTEQRRCFIGSQKSRVMTFLVFH 379
Query: 531 EVSRGDEEYLYVVGDGIKTGDTFQFFYPYPEGALMSRNVVFDNLRALK------------ 388
V GD+EYL+ G GI+TGD FQF++P P AL S + V N R L
Sbjct: 380 GVMGGDQEYLFADGVGIRTGDYFQFYHPDPSAALSSCSNVSKNFRNLNLDWSSRNCLHAR 439
Query: 387 --QSNADKKVMCGGLIFSCCGRGESFLEQPNADSLAFSENFEGVSLSGVFCCGEIGRSSV 214
N K + GG +FSCCGRGESF E+ N DS F +NF G ++G+FC GEIGR
Sbjct: 440 GVYDNVCNKELVGGFVFSCCGRGESFFERCNVDSSPFLDNFPGFPMAGIFCRGEIGRGFS 499
Query: 213 SIGQDNG-EQRSSNCFLHVYSTVYLLIMHTP 124
D G E+R+S+C LHVYS VYLL+ +TP
Sbjct: 500 VFNADEGQEERTSHCCLHVYSAVYLLVSYTP 530
>ref|XP_002318743.1| predicted protein [Populus trichocarpa] gi|222859416|gb|EEE96963.1|
predicted protein [Populus trichocarpa]
Length = 551
Score = 462 bits (1189), Expect = e-127
Identities = 263/531 (49%), Positives = 338/531 (63%), Gaps = 46/531 (8%)
Frame = -2
Query: 1578 IGEDTLEEILSRLPASSFASATCVNRSWSHLCNRILTKPKLVSALSLNPNLNVAVSEVVE 1399
I ED ++ I+ RLPASSFASA CV++SW+ +CN+IL+KPK SA SLNPN VA+ EVV
Sbjct: 18 INEDLVQNIVKRLPASSFASAACVSKSWNQICNQILSKPKFASAFSLNPNEKVALEEVVN 77
Query: 1398 KVLAQPIRPHFAIAS-IGSKFSLPATRKLIASRLGTGIPIIVSEAYGIIGKDVLTGHHKE 1222
KVL++PIRPHFAIA+ IGS L +A++LG+ PIIVS A GI+G+D +TG H+E
Sbjct: 78 KVLSEPIRPHFAIANVIGSGVDLREKLDFLATKLGSQTPIIVSCASGIMGRDAVTGEHRE 137
Query: 1221 VNWLETDVDETGKNCAGIVLTVGFLPGLKVCSIPLMKTVEGPSQQSTIDKFVTDIKDYTA 1042
V E D +C GI+LTVGFLPGLKV IPL++ + + +D FV +I+DY A
Sbjct: 138 VMLEEYWADGESISCFGIILTVGFLPGLKVDVIPLLQP-RKVHRPALVDYFVMNIRDYAA 196
Query: 1041 SVSDCNSPVGIILFADRNADMGAVLEKMDCAMSKETIIIGDESNCFLWNDGEGFKED--- 871
SVS SP GIILF D AD V+EK+D AMS++T+I+GDE FL+ G + D
Sbjct: 197 SVSGWASPAGIILFGDEGADQKPVMEKLDHAMSRDTVIVGDERAQFLYRSGVESRNDYGS 256
Query: 870 ------AIALVFATDRDKPGGI---------------------GEVHFSLALSTGVSPVG 772
A+ALVFA DRDKP GI GE+ F ALS+GVS +G
Sbjct: 257 SEYFPAAVALVFARDRDKPCGIGLLISVFAISSFATKMDWQCTGEIQFHAALSSGVSAIG 316
Query: 771 PVYKAASVRVVKDEEGICYTWLTARRKGSLEKLDGQVILEEI-DDMMSHASDNDLYIGVT 595
P YKA SVR + E G C T LTARR+G E DGQ IL++I +++++ DLYIGVT
Sbjct: 317 PRYKAVSVRKIGSETG-CTTLLTARREGEQEIQDGQRILDDINNELVNQIGRPDLYIGVT 375
Query: 594 KRRKCSVGSEKKKLVSTLAFHEVSRGDEEYLYVVGDGIKTGDTFQFFYPYPEGALMSRNV 415
++RKC +GSEK ++++ L FH V GD+EYL+ G GI+TGD FQF++ P AL S N
Sbjct: 376 EQRKCFIGSEKSRVMTFLVFHGVMGGDQEYLFADGVGIRTGDYFQFYHSDPTTALSSCNE 435
Query: 414 VFDNLRALK-------------QSNADKKVMCGGLIFSCCGRGESFLEQPNADSLAFSEN 274
V N R LK N K + GG +FSCCGRGESF E+ N DS F +N
Sbjct: 436 VSKNFRKLKLDWSSRNCLQAGVSDNVCSKELVGGFVFSCCGRGESFFERCNVDSSPFLDN 495
Query: 273 FEGVSLSGVFCCGEIGRSSVSIGQDNG-EQRSSNCFLHVYSTVYLLIMHTP 124
F GV ++GVFC GEIGR + D G E+R+ +C LHVYST YLL+ +TP
Sbjct: 496 FPGVPMAGVFCRGEIGRGFSVLNADEGPEERTLHCCLHVYSTAYLLVSYTP 546
>ref|XP_003523154.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Glycine max]
Length = 538
Score = 432 bits (1110), Expect = e-118
Identities = 254/514 (49%), Positives = 331/514 (64%), Gaps = 26/514 (5%)
Frame = -2
Query: 1587 INLIGEDTLEEILSRLPASSFASATCVNRSWSHLCNRILTKPKLVSALSLNPNLNVAVSE 1408
++++ ED L+ IL+RLPA FASA CV++SW+ LCNRILT+PKL SA+SLNP+L AV+E
Sbjct: 28 LSMLNEDLLQNILARLPALHFASAACVSKSWNSLCNRILTRPKLSSAISLNPSLPDAVNE 87
Query: 1407 VVEKVLAQPIRPHFAIASIGSKFSLPATRKLIASRLGTGIPIIVSEAYGIIGKDVLTGHH 1228
VV KVL++PIRPHFAIA+IG+ FS T LI LG+ IP+IV+ A GI+G+D +T
Sbjct: 88 VVHKVLSEPIRPHFAIANIGTGFSTAKTLCLIRQSLGSNIPVIVTVASGIMGRDAVTDEF 147
Query: 1227 KEVNW--LETDVDE---TGKNCAGIVLTVGFLPGLKVCSIPLMKTVEGPSQQSTIDKFVT 1063
KEV W L + E T G+VLTVG+LPGLKV ++PL + + +Q +D F+
Sbjct: 148 KEVKWGALFSGFGEESYTRFINEGLVLTVGYLPGLKVEAVPLRRPTK--TQAIWVDNFIK 205
Query: 1062 DIKDYTASVSDCNSPVGIILFADRNADMGAVLEKMDCAMSKETIIIGDESNCFLWNDGEG 883
DIK+Y+ASVS PVGIILF + ++DM VLEK+D AM +T+I+GDE F + G
Sbjct: 206 DIKEYSASVSSSPFPVGIILFGEASSDMKLVLEKLDHAMPMDTVIVGDERGSFDFVHKSG 265
Query: 882 FKE----------DAIALVFATDRDKPGGIGEVHFSLALSTGVSPVGPVYKAASVRVVKD 733
+A+ALVFA DR++ +G + F +ALS GVS VGP YKAAS VK
Sbjct: 266 NDSRIICSKKGNIEAVALVFARDRNR--SLGTIRFHVALSNGVSTVGPRYKAAS---VKS 320
Query: 732 EEGICYTWLTARRKGSLEKLDGQVILEEIDDMM-SHASDNDLYIGVTKRRKCSVGSEKKK 556
C TWLTARR+G E LDGQ IL +I++++ +H DL+IGV K RK S G+EK
Sbjct: 321 NNADCSTWLTARREGQQENLDGQSILLDINNLLDNHVESPDLHIGVIKHRKLSTGAEKPM 380
Query: 555 LVSTLAFHEVSRGDEEYLYVVGDGIKTGDTFQFFYPYPEGALMSRNVVFDNLRALKQSNA 376
+ +++H V GDEEYLYV G GIKTGD FQF+Y P AL S V D L+++K
Sbjct: 381 PRTCISYHGVVGGDEEYLYVDGIGIKTGDFFQFYYSDPNIALASLTKVHDALKSIKLEKK 440
Query: 375 DKKV---------MCGGLIFSCCGRGESFLEQPNADSLAFSENFEGVSLSGVFCCGEIGR 223
K + GG+IF+C RGESF + N DS F ENF GV +SG+FC GE+ R
Sbjct: 441 SKSSKGDGDNATNVFGGIIFACYSRGESFFGRQNVDSSPFLENFPGVPVSGIFCGGEMVR 500
Query: 222 SSVS-IGQDNGEQRSSNCFLHVYSTVYLLIMHTP 124
+ IGQ G S C LHVYSTVYL + +TP
Sbjct: 501 PCTTVIGQCEGASPIS-CCLHVYSTVYLAMSYTP 533