BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004152
         (1272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251...   378   e-102
ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795...   365   1e-98
ref|XP_004144716.1| PREDICTED: nucleoporin Nup43-like [Cucumis s...   361   3e-97
ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]   356   6e-96
ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|3...   341   3e-91

>ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251872 [Vitis vinifera]
            gi|297743697|emb|CBI36580.3| unnamed protein product
            [Vitis vinifera]
          Length = 357

 Score =  378 bits (971), Expect = e-102
 Identities = 191/295 (64%), Positives = 227/295 (76%), Gaps = 1/295 (0%)
 Frame = -2

Query: 1268 PPFLTHQSSWASPSRISSLKVSQSGNKPVIAASTFEGSLHFLFVNPADVAIESELALLEK 1089
            PP L  QSS +  SR+SSL +S S +KP+IAASTF GSLH L ++  D +++SE ++ EK
Sbjct: 63   PPSLNLQSSLSLSSRVSSLSLSLSAHKPLIAASTFSGSLHILLLD-FDASVQSEFSVPEK 121

Query: 1088 GFCDGPISGIDLVENGSKCVCVGGDGRVSLVTVGD-SRLEKECVFDSQGLVSYNAAKWAS 912
                G IS +DL E+G +CV VG DGRV+LV  GD SRL    V+DS GLVSY AAKWAS
Sbjct: 122  SLHVGAISCVDLQESGVECVSVGEDGRVNLVAFGDGSRLSYRRVWDSDGLVSYTAAKWAS 181

Query: 911  PSEFATGGLGFSLQWWDQRKPGGPVSQFKGGWSSGGASGIVHSIDIHPSRKHICVAGGSL 732
            P+EFATGG GF LQWWD RKPGGPVSQFKG W+    SGIVHSIDIHPSRKH C+AGGSL
Sbjct: 182  PTEFATGGFGFGLQWWDLRKPGGPVSQFKGNWAQRTTSGIVHSIDIHPSRKHTCLAGGSL 241

Query: 731  GTVFAWDLRWQQQPILLSGIGXXXXXXXXXXXXEVWEVQYDCYKQSTNVNSMSSAQILSV 552
            GTVFAWDLRWQQQPI+LSG+G            EVWEV+YD Y +++N  +MSS++IL  
Sbjct: 242  GTVFAWDLRWQQQPIILSGVGTSEVATHSPCESEVWEVKYDPYMRTSNFGNMSSSRILPA 301

Query: 551  LICSEDGILAVVEQGEEHFEVLAEPCAINSLDINPQNPSDVICSLDWESIAFITR 387
            ++CSEDGILAVVEQGEE  E+LAEPCAINS DI+ QNPSDVICSL+WESIA ++R
Sbjct: 302  MLCSEDGILAVVEQGEEPIELLAEPCAINSFDIDRQNPSDVICSLEWESIAILSR 356


>ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795073 [Glycine max]
          Length = 346

 Score =  365 bits (937), Expect = 1e-98
 Identities = 186/295 (63%), Positives = 216/295 (73%), Gaps = 2/295 (0%)
 Frame = -2

Query: 1265 PF-LTHQSSWASPSRISSLKVSQSGNKPVIAASTFEGSLHFLFVNPADVAIESELALLEK 1089
            PF L   SSW+SPSR+SSLK S    KP+I AST  GSLHFLF + +D ++ SE++L E 
Sbjct: 56   PFSLEPHSSWSSPSRVSSLKPSHFLQKPLIVASTSSGSLHFLFSDSSDASLLSEVSLPEG 115

Query: 1088 GFCDGPISGIDLVENGSKCVCVGGDGRVSLVTVGDSRLEKECVFDSQGLVSYNAAKWASP 909
                 P S +DL++ G +CV VG DG+V+LV +GDS L    +FDS GLVSY A +WASP
Sbjct: 116  ALHSLPASCVDLMDGGVECVSVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVRWASP 175

Query: 908  SEFATGGLGFSLQWWDQRKPGGPVSQFKGGWSSGGASGIVHSIDIHPSRKHICVAGGSLG 729
             EFATGG GF LQWWDQRKPGGPVSQFKG W     SGIVHSIDIHPSRKH C+AGGSLG
Sbjct: 176  MEFATGGFGFGLQWWDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSLG 235

Query: 728  TVFAWDLRWQQQPILLSGIGXXXXXXXXXXXXEVWEVQYD-CYKQSTNVNSMSSAQILSV 552
            TVFAWDLRWQQQPI+LSG G            EVWEVQYD C K +T     SS +IL  
Sbjct: 236  TVFAWDLRWQQQPIILSGAGAANTAVQSISESEVWEVQYDRCIKSNT-----SSTRILPS 290

Query: 551  LICSEDGILAVVEQGEEHFEVLAEPCAINSLDINPQNPSDVICSLDWESIAFITR 387
            +ICSEDGIL V+EQGEE  E+LAEPCAINS DI+  NPSDVICSL+WE++A +TR
Sbjct: 291  MICSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPSDVICSLEWEAVAILTR 345


>ref|XP_004144716.1| PREDICTED: nucleoporin Nup43-like [Cucumis sativus]
            gi|449511548|ref|XP_004163987.1| PREDICTED: nucleoporin
            Nup43-like [Cucumis sativus]
          Length = 350

 Score =  361 bits (926), Expect = 3e-97
 Identities = 178/294 (60%), Positives = 216/294 (73%)
 Frame = -2

Query: 1268 PPFLTHQSSWASPSRISSLKVSQSGNKPVIAASTFEGSLHFLFVNPADVAIESELALLEK 1089
            P  +   S+W SPSR+SSLK SQ    P++ AST+ GSLH L V P + +++SEL++ EK
Sbjct: 60   PLDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEK 119

Query: 1088 GFCDGPISGIDLVENGSKCVCVGGDGRVSLVTVGDSRLEKECVFDSQGLVSYNAAKWASP 909
               DGPIS +D+++ G +C+ V  DGRVSLV+VG+S L    +FDS GLVSYNA KWASP
Sbjct: 120  MLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASP 179

Query: 908  SEFATGGLGFSLQWWDQRKPGGPVSQFKGGWSSGGASGIVHSIDIHPSRKHICVAGGSLG 729
            +EF TGG GFSLQWWDQRKPGG VSQFK  W    ASGIVH IDIHPSRKH C+AGGS G
Sbjct: 180  TEFVTGGCGFSLQWWDQRKPGGAVSQFKANW----ASGIVHCIDIHPSRKHTCLAGGSFG 235

Query: 728  TVFAWDLRWQQQPILLSGIGXXXXXXXXXXXXEVWEVQYDCYKQSTNVNSMSSAQILSVL 549
            TVFAWDLR QQQPI+LSG+             EVWEV YD Y +S N+  MSS QIL  +
Sbjct: 236  TVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAM 295

Query: 548  ICSEDGILAVVEQGEEHFEVLAEPCAINSLDINPQNPSDVICSLDWESIAFITR 387
            ICSEDGIL  +EQG+E  E+LAEPCAIN  DIN Q+PS+VIC+L+WES+A ++R
Sbjct: 296  ICSEDGILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSR 349


>ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]
          Length = 347

 Score =  356 bits (914), Expect = 6e-96
 Identities = 183/298 (61%), Positives = 212/298 (71%), Gaps = 4/298 (1%)
 Frame = -2

Query: 1268 PPFLTHQSSWASPSRISSLKVSQSGNKPVIAASTFEGSLHFLFVNPADVAIESELALLEK 1089
            P  L   SSW+SPSR+SSLK S    KP+I AST  GSLHFLF + +   +ESE+++ E 
Sbjct: 54   PLSLEPHSSWSSPSRVSSLKASHFLQKPLIVASTSSGSLHFLFSDSSVATLESEVSIPEG 113

Query: 1088 GFCDGPISGIDLVENGSKCVCVGGDGRVSLVTVGDSRLEKECVFDSQGLVSYNAAKWASP 909
                 P S +DL++ G +CV VG DG+V+LV +GDS L    +FDS GLVSY A  WASP
Sbjct: 114  ALHSVPASCVDLLDGGVECVTVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVSWASP 173

Query: 908  SEFATGGLGFSLQWWDQRKPGGPVSQFKGGWSSGGASGIVHSIDIHPSRKHICVAGGSLG 729
             EFATGG GF L WWDQRKPGGPVSQFKG W     SGIVHSIDIHPSRKH C+AGGSLG
Sbjct: 174  MEFATGGYGFGLHWWDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSLG 233

Query: 728  TVFAWDLRWQQQPILLSGIG---XXXXXXXXXXXXEVWEVQYD-CYKQSTNVNSMSSAQI 561
            TVFAWDLRWQQQPI+LSG G               EVWEVQYD C K +T     SS +I
Sbjct: 234  TVFAWDLRWQQQPIILSGAGAGAGGNTAVQSISESEVWEVQYDRCIKPNT-----SSTRI 288

Query: 560  LSVLICSEDGILAVVEQGEEHFEVLAEPCAINSLDINPQNPSDVICSLDWESIAFITR 387
            L  +ICSEDGIL V+EQGEE  E+LAEPCAINS DI+  NPSDVICSL+WE++A +TR
Sbjct: 289  LPSMICSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPSDVICSLEWEAVAILTR 346


>ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|355511317|gb|AES92459.1|
            Nucleoporin Nup43 [Medicago truncatula]
          Length = 351

 Score =  341 bits (874), Expect = 3e-91
 Identities = 179/293 (61%), Positives = 205/293 (69%), Gaps = 5/293 (1%)
 Frame = -2

Query: 1250 QSSWASPSRISSLKVSQSGNKPVIAASTFEGSLHFLFVNPADVAIESELALLEKGFCDGP 1071
            QSSW SPS ISS+K SQ   K +IA+ST  GSLHFLF +  D  + SE+++ E       
Sbjct: 63   QSSWTSPSPISSIKSSQFLQKSIIASSTSSGSLHFLFADSTDARLVSEVSVPENELHLEG 122

Query: 1070 ISGIDLVENGSKCVCVGGDGRVSLVTVGDSRLEKECVFDSQGLVSYNAAKWASPSEFATG 891
               IDL++ G +CV VG DGR++LVTVGDS L    +FDS GLVSY + KWASP EFATG
Sbjct: 123  KCCIDLMDGGVECVTVGDDGRINLVTVGDSNLNYRRLFDSGGLVSYTSVKWASPVEFATG 182

Query: 890  GLGFSLQWWDQRKPGGPVSQFKGGWSSGGASGIVHSIDIHPSRKHICVAGGSLGTVFAWD 711
            G GF L WWDQRKPGGPVSQFKG W     SGIVHSIDIHPSRKH C+A GSLGTV AWD
Sbjct: 183  GYGFGLHWWDQRKPGGPVSQFKGNWDKNLNSGIVHSIDIHPSRKHTCLAAGSLGTVLAWD 242

Query: 710  LRWQQQPILLSGI----GXXXXXXXXXXXXEVWEVQYD-CYKQSTNVNSMSSAQILSVLI 546
            LR QQQPI+LSG     G            EVWEVQYD C K +T     SS +IL  +I
Sbjct: 243  LRMQQQPIILSGTGAGDGAGNTAVQSISESEVWEVQYDRCIKSNT-----SSTRILPAMI 297

Query: 545  CSEDGILAVVEQGEEHFEVLAEPCAINSLDINPQNPSDVICSLDWESIAFITR 387
            CSEDGIL V+EQGEE  E+LAEPCAINS DI+  NP DVICSL+WES+A +TR
Sbjct: 298  CSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPLDVICSLEWESVAILTR 350