BLASTX nr result
ID: Coptis24_contig00004149
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004149 (476 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243... 79 3e-13 ref|XP_002523493.1| conserved hypothetical protein [Ricinus comm... 72 6e-11 gb|AFW64153.1| putative HLH DNA-binding domain superfamily prote... 65 6e-09 ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [S... 60 2e-07 ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [S... 60 2e-07 >ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera] Length = 519 Score = 79.3 bits (194), Expect = 3e-13 Identities = 63/203 (31%), Positives = 81/203 (39%), Gaps = 50/203 (24%) Frame = -3 Query: 459 HHHQTPPDDFLDQMLCNLPSWSDLHGNPNKSPWDLNPKPEXXXXXXNS------------ 316 H + DDFL+QML LPSWSDL NP KSPW+LN S Sbjct: 61 HFDSSSHDDFLEQMLSTLPSWSDLPANP-KSPWELNASNPISMPSNKSRDLSDDTTPSNP 119 Query: 315 ----LQYDESILLASRLRQHQITADSPXXXXXXXXXXXXXXXXXXXXTSKSMLLQQQQLR 148 +DES +LAS+LRQHQI+ +S +++LQQQ L Sbjct: 120 DNVQFAFDESAMLASKLRQHQISGNS-------------------SAAKSALMLQQQLLL 160 Query: 147 AAGI-----------GGDSSFLPIPLTLGNGADT-----------------------DNS 70 + G+ G+S L +PL+L NG D S Sbjct: 161 SRGVAMGRSPSNGSGAGESGLLQLPLSLSNGDSCLVDRSQNDVVDGSSSFKSPNQGGDGS 220 Query: 69 APGLYNGFSNSLPRPTQHFNHAQ 1 LYNGF+ +L Q N AQ Sbjct: 221 VQALYNGFAGALHGSGQASNQAQ 243 >ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis] gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis] Length = 474 Score = 71.6 bits (174), Expect = 6e-11 Identities = 66/199 (33%), Positives = 79/199 (39%), Gaps = 41/199 (20%) Frame = -3 Query: 474 NNFDHHHHQ----------------TPPDDFLDQMLCNLPS--WSDLHGNPNKSPWDLN- 352 +N HHHHQ + DDFL+QML LPS W+DL KSPWDL Sbjct: 33 HNHHHHHHQDLQNQQIQNPHFDPSPSSNDDFLEQMLSTLPSCSWADL-----KSPWDLTT 87 Query: 351 ------PKP-EXXXXXXNSL----------QYDESILLASRLRQHQITADSPXXXXXXXX 223 PKP + SL +DES+LLAS+LRQHQI+ Sbjct: 88 TANLNLPKPRDLSDETPPSLPDSNNNVGFHNFDESVLLASKLRQHQISGGG--------- 138 Query: 222 XXXXXXXXXXXXTSKSMLLQQQQLRAAGIGGDSSFLPIPLTLGNGADTDNSAPGLYNGFS 43 +K ML QQ + AA GG + D S GLYNGF Sbjct: 139 GGGGPSPAAAAAAAKLMLQQQLMMAAAARGGLGQNDVLDGFKSPNQGGDGSVQGLYNGFG 198 Query: 42 NSLPRPT-----QHFNHAQ 1 T QHF+H Q Sbjct: 199 TGSMHGTGQSSNQHFHHPQ 217 >gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays] Length = 230 Score = 65.1 bits (157), Expect = 6e-09 Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 7/138 (5%) Frame = -3 Query: 438 DDFLDQMLCNL-PSWSDLHGNPNKSPWDLNPKPEXXXXXXNSLQYDESILLASRLRQHQI 262 DDFLDQML L P+W DL G SPW+L P+ + +DE+ LLASRLR HQI Sbjct: 11 DDFLDQMLSTLPPAWPDL-GYGKSSPWELPAGPD--AAAAAAAAFDETALLASRLRHHQI 67 Query: 261 TADSPXXXXXXXXXXXXXXXXXXXXTSKSMLLQQQQLR--AAGIGGDSSFLPIPLTLGNG 88 K ++L L AAG G D+ F+P+PL Sbjct: 68 ----------------------GGVDEKPLMLHLSDLHGVAAGGGDDAGFMPLPLFTDRA 105 Query: 87 ADTDNSAPG----LYNGF 46 A +A G LYNGF Sbjct: 106 AFKSPNAAGADQALYNGF 123 >ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor] gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor] Length = 447 Score = 60.1 bits (144), Expect = 2e-07 Identities = 57/160 (35%), Positives = 69/160 (43%), Gaps = 25/160 (15%) Frame = -3 Query: 450 QTPPDDFLDQMLCNLPS-WSDLHGNPNKSPWDLNP-----KPEXXXXXXNSLQYDESILL 289 Q DDF DQML LPS W+DL G KSPW+L P S DES LL Sbjct: 18 QQQADDFFDQMLSTLPSAWADL-GAGGKSPWELTPGTGAGAAAEDPAAQQSHFGDESALL 76 Query: 288 ASRLRQHQITADSPXXXXXXXXXXXXXXXXXXXXTSKSMLLQQQQL-RAAGIGGDSS--- 121 ASRLRQHQI ++ ++LQ L R G+GG+ S Sbjct: 77 ASRLRQHQIGGGD------------------VKSSASPVMLQLSDLHRHGGLGGEESRGN 118 Query: 120 -FLPIPL-----------TLGNGADTDNSAPG---LYNGF 46 F P+PL + G + NSA G L+NGF Sbjct: 119 GFSPLPLFSDRSSVPAREEMEGGFKSPNSAGGDHSLFNGF 158 >ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor] gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor] Length = 393 Score = 59.7 bits (143), Expect = 2e-07 Identities = 49/145 (33%), Positives = 61/145 (42%), Gaps = 14/145 (9%) Frame = -3 Query: 438 DDFLDQMLCNLPS-WSDLHGNPNKSPWDLNPKPEXXXXXXNSLQYDESILLASRLRQHQI 262 DDF DQML LP+ WSDL KSPW+L ++ YDE+ LLASRLR HQI Sbjct: 15 DDFFDQMLSTLPAAWSDL--GSGKSPWEL--PAGAGAVPEDAAAYDEAALLASRLRHHQI 70 Query: 261 TADSPXXXXXXXXXXXXXXXXXXXXTSKSMLLQQQQLRAAGIGG---DSSFLPIPLTLGN 91 K ++L L G GG D+ F+P+PL Sbjct: 71 GGGGAGAG------------------EKPLMLHLSDLHGLGGGGAGDDAGFMPLPLFTDR 112 Query: 90 GADTDNSA----------PGLYNGF 46 D ++A LYNGF Sbjct: 113 ARDDMDAAFKSPNATGADQALYNGF 137