BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004149
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243...    79   3e-13
ref|XP_002523493.1| conserved hypothetical protein [Ricinus comm...    72   6e-11
gb|AFW64153.1| putative HLH DNA-binding domain superfamily prote...    65   6e-09
ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [S...    60   2e-07
ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [S...    60   2e-07

>ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
          Length = 519

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 63/203 (31%), Positives = 81/203 (39%), Gaps = 50/203 (24%)
 Frame = -3

Query: 459 HHHQTPPDDFLDQMLCNLPSWSDLHGNPNKSPWDLNPKPEXXXXXXNS------------ 316
           H   +  DDFL+QML  LPSWSDL  NP KSPW+LN           S            
Sbjct: 61  HFDSSSHDDFLEQMLSTLPSWSDLPANP-KSPWELNASNPISMPSNKSRDLSDDTTPSNP 119

Query: 315 ----LQYDESILLASRLRQHQITADSPXXXXXXXXXXXXXXXXXXXXTSKSMLLQQQQLR 148
                 +DES +LAS+LRQHQI+ +S                        +++LQQQ L 
Sbjct: 120 DNVQFAFDESAMLASKLRQHQISGNS-------------------SAAKSALMLQQQLLL 160

Query: 147 AAGI-----------GGDSSFLPIPLTLGNGADT-----------------------DNS 70
           + G+            G+S  L +PL+L NG                          D S
Sbjct: 161 SRGVAMGRSPSNGSGAGESGLLQLPLSLSNGDSCLVDRSQNDVVDGSSSFKSPNQGGDGS 220

Query: 69  APGLYNGFSNSLPRPTQHFNHAQ 1
              LYNGF+ +L    Q  N AQ
Sbjct: 221 VQALYNGFAGALHGSGQASNQAQ 243


>ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
           gi|223537200|gb|EEF38832.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 474

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 66/199 (33%), Positives = 79/199 (39%), Gaps = 41/199 (20%)
 Frame = -3

Query: 474 NNFDHHHHQ----------------TPPDDFLDQMLCNLPS--WSDLHGNPNKSPWDLN- 352
           +N  HHHHQ                +  DDFL+QML  LPS  W+DL     KSPWDL  
Sbjct: 33  HNHHHHHHQDLQNQQIQNPHFDPSPSSNDDFLEQMLSTLPSCSWADL-----KSPWDLTT 87

Query: 351 ------PKP-EXXXXXXNSL----------QYDESILLASRLRQHQITADSPXXXXXXXX 223
                 PKP +       SL           +DES+LLAS+LRQHQI+            
Sbjct: 88  TANLNLPKPRDLSDETPPSLPDSNNNVGFHNFDESVLLASKLRQHQISGGG--------- 138

Query: 222 XXXXXXXXXXXXTSKSMLLQQQQLRAAGIGGDSSFLPIPLTLGNGADTDNSAPGLYNGFS 43
                        +K ML QQ  + AA  GG      +          D S  GLYNGF 
Sbjct: 139 GGGGPSPAAAAAAAKLMLQQQLMMAAAARGGLGQNDVLDGFKSPNQGGDGSVQGLYNGFG 198

Query: 42  NSLPRPT-----QHFNHAQ 1
                 T     QHF+H Q
Sbjct: 199 TGSMHGTGQSSNQHFHHPQ 217


>gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 230

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 7/138 (5%)
 Frame = -3

Query: 438 DDFLDQMLCNL-PSWSDLHGNPNKSPWDLNPKPEXXXXXXNSLQYDESILLASRLRQHQI 262
           DDFLDQML  L P+W DL G    SPW+L   P+       +  +DE+ LLASRLR HQI
Sbjct: 11  DDFLDQMLSTLPPAWPDL-GYGKSSPWELPAGPD--AAAAAAAAFDETALLASRLRHHQI 67

Query: 261 TADSPXXXXXXXXXXXXXXXXXXXXTSKSMLLQQQQLR--AAGIGGDSSFLPIPLTLGNG 88
                                      K ++L    L   AAG G D+ F+P+PL     
Sbjct: 68  ----------------------GGVDEKPLMLHLSDLHGVAAGGGDDAGFMPLPLFTDRA 105

Query: 87  ADTDNSAPG----LYNGF 46
           A    +A G    LYNGF
Sbjct: 106 AFKSPNAAGADQALYNGF 123


>ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
           gi|241916190|gb|EER89334.1| hypothetical protein
           SORBIDRAFT_10g005650 [Sorghum bicolor]
          Length = 447

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 57/160 (35%), Positives = 69/160 (43%), Gaps = 25/160 (15%)
 Frame = -3

Query: 450 QTPPDDFLDQMLCNLPS-WSDLHGNPNKSPWDLNP-----KPEXXXXXXNSLQYDESILL 289
           Q   DDF DQML  LPS W+DL G   KSPW+L P               S   DES LL
Sbjct: 18  QQQADDFFDQMLSTLPSAWADL-GAGGKSPWELTPGTGAGAAAEDPAAQQSHFGDESALL 76

Query: 288 ASRLRQHQITADSPXXXXXXXXXXXXXXXXXXXXTSKSMLLQQQQL-RAAGIGGDSS--- 121
           ASRLRQHQI                         ++  ++LQ   L R  G+GG+ S   
Sbjct: 77  ASRLRQHQIGGGD------------------VKSSASPVMLQLSDLHRHGGLGGEESRGN 118

Query: 120 -FLPIPL-----------TLGNGADTDNSAPG---LYNGF 46
            F P+PL            +  G  + NSA G   L+NGF
Sbjct: 119 GFSPLPLFSDRSSVPAREEMEGGFKSPNSAGGDHSLFNGF 158


>ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
           gi|241932808|gb|EES05953.1| hypothetical protein
           SORBIDRAFT_04g035890 [Sorghum bicolor]
          Length = 393

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 49/145 (33%), Positives = 61/145 (42%), Gaps = 14/145 (9%)
 Frame = -3

Query: 438 DDFLDQMLCNLPS-WSDLHGNPNKSPWDLNPKPEXXXXXXNSLQYDESILLASRLRQHQI 262
           DDF DQML  LP+ WSDL     KSPW+L           ++  YDE+ LLASRLR HQI
Sbjct: 15  DDFFDQMLSTLPAAWSDL--GSGKSPWEL--PAGAGAVPEDAAAYDEAALLASRLRHHQI 70

Query: 261 TADSPXXXXXXXXXXXXXXXXXXXXTSKSMLLQQQQLRAAGIGG---DSSFLPIPLTLGN 91
                                      K ++L    L   G GG   D+ F+P+PL    
Sbjct: 71  GGGGAGAG------------------EKPLMLHLSDLHGLGGGGAGDDAGFMPLPLFTDR 112

Query: 90  GADTDNSA----------PGLYNGF 46
             D  ++A            LYNGF
Sbjct: 113 ARDDMDAAFKSPNATGADQALYNGF 137