BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004136
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27147.3| unnamed protein product [Vitis vinifera]              187   1e-45
ref|XP_002306382.1| predicted protein [Populus trichocarpa] gi|1...   186   4e-45
ref|XP_002310076.1| predicted protein [Populus trichocarpa] gi|2...   185   7e-45
ref|XP_003531053.1| PREDICTED: 60S ribosomal protein L44-like [G...   184   9e-45
ref|XP_003593138.1| 60S ribosomal protein L44 [Medicago truncatu...   184   9e-45

>emb|CBI27147.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score =  187 bits (476), Expect = 1e-45
 Identities = 93/122 (76%), Positives = 97/122 (79%), Gaps = 4/122 (3%)
 Frame = +3

Query: 24  KERQKEEPNLL----AAMVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRY 191
           K+++K+ PN        MVNVP              HTLHKVTQYKKGKDSLAAQGKRRY
Sbjct: 193 KKKKKKNPNFSREFSVTMVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRY 252

Query: 192 DRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQSCKHVSQHAIKRCKHFEIGGDKKGKGTS 371
           DRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQ CKHVSQH IKRCKHFEIGGDKKGKGTS
Sbjct: 253 DRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTS 312

Query: 372 LF 377
           LF
Sbjct: 313 LF 314


>ref|XP_002306382.1| predicted protein [Populus trichocarpa] gi|118482179|gb|ABK93019.1|
           unknown [Populus trichocarpa]
           gi|222855831|gb|EEE93378.1| predicted protein [Populus
           trichocarpa]
          Length = 105

 Score =  186 bits (471), Expect = 4e-45
 Identities = 90/105 (85%), Positives = 91/105 (86%)
 Frame = +3

Query: 63  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 242
           MVNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 243 KAKTTKKIVLRLQCQSCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 377
           KAKTTKKIVLRLQCQ+CKHVSQHAIKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQACKHVSQHAIKRCKHFEIGGDKKGKGTSLF 105


>ref|XP_002310076.1| predicted protein [Populus trichocarpa]
           gi|224113271|ref|XP_002316442.1| predicted protein
           [Populus trichocarpa] gi|118484797|gb|ABK94266.1|
           unknown [Populus trichocarpa]
           gi|118487919|gb|ABK95781.1| unknown [Populus
           trichocarpa] gi|222852979|gb|EEE90526.1| predicted
           protein [Populus trichocarpa]
           gi|222865482|gb|EEF02613.1| predicted protein [Populus
           trichocarpa]
          Length = 105

 Score =  185 bits (469), Expect = 7e-45
 Identities = 90/105 (85%), Positives = 90/105 (85%)
 Frame = +3

Query: 63  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 242
           MVNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 243 KAKTTKKIVLRLQCQSCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 377
           KAKTTKKIVLRLQCQSCKHVSQH IKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQSCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 105


>ref|XP_003531053.1| PREDICTED: 60S ribosomal protein L44-like [Glycine max]
           gi|356525904|ref|XP_003531561.1| PREDICTED: 60S
           ribosomal protein L44-like [Glycine max]
           gi|356558594|ref|XP_003547589.1| PREDICTED: 60S
           ribosomal protein L44-like [Glycine max]
          Length = 105

 Score =  184 bits (468), Expect = 9e-45
 Identities = 89/105 (84%), Positives = 90/105 (85%)
 Frame = +3

Query: 63  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 242
           MVNVP              HTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 243 KAKTTKKIVLRLQCQSCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 377
           KAKTTKKIVLRLQCQ CKHVSQHAIKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 105


>ref|XP_003593138.1| 60S ribosomal protein L44 [Medicago truncatula]
           gi|357510505|ref|XP_003625541.1| 60S ribosomal protein
           L44 [Medicago truncatula] gi|355482186|gb|AES63389.1|
           60S ribosomal protein L44 [Medicago truncatula]
           gi|355500556|gb|AES81759.1| 60S ribosomal protein L44
           [Medicago truncatula] gi|388495912|gb|AFK36022.1|
           unknown [Lotus japonicus] gi|388502154|gb|AFK39143.1|
           unknown [Medicago truncatula]
           gi|388512123|gb|AFK44123.1| unknown [Medicago
           truncatula] gi|388516165|gb|AFK46144.1| unknown [Lotus
           japonicus]
          Length = 105

 Score =  184 bits (468), Expect = 9e-45
 Identities = 89/105 (84%), Positives = 90/105 (85%)
 Frame = +3

Query: 63  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 242
           MVNVP              HTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNVPKTKKTYCKSKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 243 KAKTTKKIVLRLQCQSCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 377
           KAKTTKKIVLRLQCQ CKHVSQHAIKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 105