BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004135
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306382.1| predicted protein [Populus trichocarpa] gi|1...   186   2e-45
ref|XP_002310076.1| predicted protein [Populus trichocarpa] gi|2...   185   4e-45
ref|XP_003531053.1| PREDICTED: 60S ribosomal protein L44-like [G...   184   5e-45
ref|XP_003593138.1| 60S ribosomal protein L44 [Medicago truncatu...   184   5e-45
ref|NP_001236119.1| uncharacterized protein LOC100305488 [Glycin...   184   5e-45

>ref|XP_002306382.1| predicted protein [Populus trichocarpa] gi|118482179|gb|ABK93019.1|
           unknown [Populus trichocarpa]
           gi|222855831|gb|EEE93378.1| predicted protein [Populus
           trichocarpa]
          Length = 105

 Score =  186 bits (471), Expect = 2e-45
 Identities = 90/105 (85%), Positives = 91/105 (86%)
 Frame = +3

Query: 15  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 194
           MVNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 195 KAKTTKKIVLRLQCQSCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 329
           KAKTTKKIVLRLQCQ+CKHVSQHAIKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQACKHVSQHAIKRCKHFEIGGDKKGKGTSLF 105


>ref|XP_002310076.1| predicted protein [Populus trichocarpa]
           gi|224113271|ref|XP_002316442.1| predicted protein
           [Populus trichocarpa] gi|118484797|gb|ABK94266.1|
           unknown [Populus trichocarpa]
           gi|118487919|gb|ABK95781.1| unknown [Populus
           trichocarpa] gi|222852979|gb|EEE90526.1| predicted
           protein [Populus trichocarpa]
           gi|222865482|gb|EEF02613.1| predicted protein [Populus
           trichocarpa]
          Length = 105

 Score =  185 bits (469), Expect = 4e-45
 Identities = 90/105 (85%), Positives = 90/105 (85%)
 Frame = +3

Query: 15  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 194
           MVNVP              HTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNVPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 195 KAKTTKKIVLRLQCQSCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 329
           KAKTTKKIVLRLQCQSCKHVSQH IKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQSCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 105


>ref|XP_003531053.1| PREDICTED: 60S ribosomal protein L44-like [Glycine max]
           gi|356525904|ref|XP_003531561.1| PREDICTED: 60S
           ribosomal protein L44-like [Glycine max]
           gi|356558594|ref|XP_003547589.1| PREDICTED: 60S
           ribosomal protein L44-like [Glycine max]
          Length = 105

 Score =  184 bits (468), Expect = 5e-45
 Identities = 89/105 (84%), Positives = 90/105 (85%)
 Frame = +3

Query: 15  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 194
           MVNVP              HTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 195 KAKTTKKIVLRLQCQSCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 329
           KAKTTKKIVLRLQCQ CKHVSQHAIKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 105


>ref|XP_003593138.1| 60S ribosomal protein L44 [Medicago truncatula]
           gi|357510505|ref|XP_003625541.1| 60S ribosomal protein
           L44 [Medicago truncatula] gi|355482186|gb|AES63389.1|
           60S ribosomal protein L44 [Medicago truncatula]
           gi|355500556|gb|AES81759.1| 60S ribosomal protein L44
           [Medicago truncatula] gi|388495912|gb|AFK36022.1|
           unknown [Lotus japonicus] gi|388502154|gb|AFK39143.1|
           unknown [Medicago truncatula]
           gi|388512123|gb|AFK44123.1| unknown [Medicago
           truncatula] gi|388516165|gb|AFK46144.1| unknown [Lotus
           japonicus]
          Length = 105

 Score =  184 bits (468), Expect = 5e-45
 Identities = 89/105 (84%), Positives = 90/105 (85%)
 Frame = +3

Query: 15  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 194
           MVNVP              HTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNVPKTKKTYCKSKECKKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 195 KAKTTKKIVLRLQCQSCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 329
           KAKTTKKIVLRLQCQ CKHVSQHAIKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 105


>ref|NP_001236119.1| uncharacterized protein LOC100305488 [Glycine max]
           gi|255625669|gb|ACU13179.1| unknown [Glycine max]
          Length = 105

 Score =  184 bits (468), Expect = 5e-45
 Identities = 89/105 (84%), Positives = 90/105 (85%)
 Frame = +3

Query: 15  MVNVPXXXXXXXXXXXXXXHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHK 194
           MVNVP              HTLHKVTQYKKGKDS+AAQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1   MVNVPKTKKTYCKSRECRKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHK 60

Query: 195 KAKTTKKIVLRLQCQSCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 329
           KAKTTKKIVLRLQCQ CKHVSQHAIKRCKHFEIGGDKKGKGTSLF
Sbjct: 61  KAKTTKKIVLRLQCQGCKHVSQHAIKRCKHFEIGGDKKGKGTSLF 105