BLASTX nr result

ID: Coptis24_contig00004133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004133
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511616.1| Import inner membrane translocase subunit ti...    87   5e-25
ref|NP_001241354.1| uncharacterized protein LOC100779212 [Glycin...    87   5e-25
ref|XP_003536183.1| PREDICTED: TIM21-like protein, mitochondrial...    87   6e-25
ref|XP_002263208.1| PREDICTED: TIM21-like protein, mitochondrial...    87   8e-25
ref|XP_004159453.1| PREDICTED: uncharacterized LOC101212713 [Cuc...    81   2e-24

>ref|XP_002511616.1| Import inner membrane translocase subunit tim21, mitochondrial
           precursor, putative [Ricinus communis]
           gi|223548796|gb|EEF50285.1| Import inner membrane
           translocase subunit tim21, mitochondrial precursor,
           putative [Ricinus communis]
          Length = 312

 Score = 87.0 bits (214), Expect(2) = 5e-25
 Identities = 46/90 (51%), Positives = 54/90 (60%)
 Frame = -3

Query: 380 SNSTAELLEQHRKXXXXXXXXXXXPTYNIPEEPVTFVEGASYSVFILAGLGVVAVCGYFA 201
           S  T E   + RK           PTYNIPE+PVTF EGASYS+ ILAGLGV A  GY  
Sbjct: 129 SKKTGEATSETRKEVSTVEDPFDAPTYNIPEKPVTFTEGASYSIIILAGLGVAAAAGYAV 188

Query: 200 INELLMESKEHKVLGKALESAQNDNQDMVR 111
             EL+ E KE+K+  KAL+  Q+D Q  VR
Sbjct: 189 FKELIFEPKEYKIFNKALKRIQDDAQVRVR 218



 Score = 52.4 bits (124), Expect(2) = 5e-25
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = -2

Query: 126 SGYGQESRNRHARQQIPNSK*TDEDGVQRVEVNF 25
           +GYGQESRNR ARQ+IPN   TDEDGV+ V VNF
Sbjct: 224 TGYGQESRNRAARQRIPNKIYTDEDGVEHVLVNF 257


>ref|NP_001241354.1| uncharacterized protein LOC100779212 [Glycine max]
           gi|255636939|gb|ACU18802.1| unknown [Glycine max]
          Length = 235

 Score = 87.4 bits (215), Expect(2) = 5e-25
 Identities = 46/91 (50%), Positives = 57/91 (62%)
 Frame = -3

Query: 383 RSNSTAELLEQHRKXXXXXXXXXXXPTYNIPEEPVTFVEGASYSVFILAGLGVVAVCGYF 204
           +SN  AE   + +K           PTYNIPE+PVTFVEGASYSV ILAGLG+ A  GY 
Sbjct: 53  QSNEAAESSNKAKKDVANVEDPFSAPTYNIPEKPVTFVEGASYSVVILAGLGIAAAAGYA 112

Query: 203 AINELLMESKEHKVLGKALESAQNDNQDMVR 111
              EL+ + KE+K+  KAL+  Q+D Q  VR
Sbjct: 113 VFKELIFQPKEYKIYNKALKRIQDDGQVRVR 143



 Score = 52.0 bits (123), Expect(2) = 5e-25
 Identities = 24/34 (70%), Positives = 29/34 (85%)
 Frame = -2

Query: 126 SGYGQESRNRHARQQIPNSK*TDEDGVQRVEVNF 25
           +GYGQESRNR ARQ+IP+   TDE+GV+ VEVNF
Sbjct: 149 TGYGQESRNRAARQRIPHRVWTDEEGVEHVEVNF 182


>ref|XP_003536183.1| PREDICTED: TIM21-like protein, mitochondrial-like [Glycine max]
          Length = 234

 Score = 87.0 bits (214), Expect(2) = 6e-25
 Identities = 45/91 (49%), Positives = 56/91 (61%)
 Frame = -3

Query: 383 RSNSTAELLEQHRKXXXXXXXXXXXPTYNIPEEPVTFVEGASYSVFILAGLGVVAVCGYF 204
           +SN T E   + +K           PTYNIPE+PVTFVEGASY V ILAGLG+ A  GY 
Sbjct: 52  QSNETGETTNKAKKDVANVEDPFSAPTYNIPEKPVTFVEGASYGVVILAGLGIAAAAGYA 111

Query: 203 AINELLMESKEHKVLGKALESAQNDNQDMVR 111
              EL+ + KE+K+  KAL+  Q+D Q  VR
Sbjct: 112 VFKELIFQPKEYKIYNKALKRIQDDGQIRVR 142



 Score = 52.0 bits (123), Expect(2) = 6e-25
 Identities = 24/34 (70%), Positives = 29/34 (85%)
 Frame = -2

Query: 126 SGYGQESRNRHARQQIPNSK*TDEDGVQRVEVNF 25
           +GYGQESRNR ARQ+IP+   TDE+GV+ VEVNF
Sbjct: 148 TGYGQESRNRAARQRIPHRVWTDEEGVEHVEVNF 181


>ref|XP_002263208.1| PREDICTED: TIM21-like protein, mitochondrial [Vitis vinifera]
           gi|296088479|emb|CBI37470.3| unnamed protein product
           [Vitis vinifera]
          Length = 314

 Score = 86.7 bits (213), Expect(2) = 8e-25
 Identities = 46/90 (51%), Positives = 53/90 (58%)
 Frame = -3

Query: 380 SNSTAELLEQHRKXXXXXXXXXXXPTYNIPEEPVTFVEGASYSVFILAGLGVVAVCGYFA 201
           S S  E   + RK           PTYNIPE+PVTF EGASYSV IL GLG+ A  GY  
Sbjct: 137 SKSPEEKQSETRKDISTVEDPFDAPTYNIPEKPVTFAEGASYSVIILVGLGIAAAAGYAV 196

Query: 200 INELLMESKEHKVLGKALESAQNDNQDMVR 111
             EL+ E KE+K+ GKAL+  Q D Q  VR
Sbjct: 197 FKELIFEPKEYKIFGKALKRVQEDGQVRVR 226



 Score = 52.0 bits (123), Expect(2) = 8e-25
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = -2

Query: 126 SGYGQESRNRHARQQIPNSK*TDEDGVQRVEVNF 25
           +GYGQESRNR ARQ+I N   TDEDGV+ VEVNF
Sbjct: 232 TGYGQESRNRAARQRISNRIWTDEDGVEHVEVNF 265


>ref|XP_004159453.1| PREDICTED: uncharacterized LOC101212713 [Cucumis sativus]
          Length = 323

 Score = 81.3 bits (199), Expect(2) = 2e-24
 Identities = 39/65 (60%), Positives = 47/65 (72%)
 Frame = -3

Query: 305 TYNIPEEPVTFVEGASYSVFILAGLGVVAVCGYFAINELLMESKEHKVLGKALESAQNDN 126
           TYNIPE+PVTF EGASYS  ILAGLGV A  GY    EL+ + KE+K+  KAL+  Q+D+
Sbjct: 171 TYNIPEKPVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDS 230

Query: 125 QDMVR 111
           Q  VR
Sbjct: 231 QVRVR 235



 Score = 56.2 bits (134), Expect(2) = 2e-24
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -2

Query: 126 SGYGQESRNRHARQQIPNSK*TDEDGVQRVEVNF 25
           +GYGQE+RNR ARQ+IPN   TDEDGV+RVEVNF
Sbjct: 241 TGYGQETRNRAARQRIPNRVWTDEDGVERVEVNF 274


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