BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004132
         (2609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32131.3| unnamed protein product [Vitis vinifera]              345   3e-92
ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   345   3e-92
ref|XP_002525342.1| U4/U6 small nuclear ribonucleoprotein Prp31,...   335   3e-89
ref|XP_003547677.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   333   2e-88
ref|XP_003553898.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   332   3e-88

>emb|CBI32131.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  345 bits (886), Expect = 3e-92
 Identities = 187/344 (54%), Positives = 237/344 (68%), Gaps = 15/344 (4%)
 Frame = +3

Query: 1533 VDNEIVTVHNFIRSHYRHKFTELESLVPHPVDYARVVKKIGNETDLTLVDLQGLLPSNSI 1712
            ++NEIV +HNFIR +YR KF ELESLV HP+DYARVVKKIGNE DLTLVDL+GLLPS  I
Sbjct: 145  IENEIVIIHNFIRDNYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAII 204

Query: 1713 M--AVIASTTSGKLLPEENLKKTIDACDCILSLDLGKNKVLEFLESILGYVAPNLAVLVG 1886
            M  +V ASTTSGK LPEENLKKT+DACD  L+LDL K KVL+F+ES +GY+APNL+ +VG
Sbjct: 205  MVVSVTASTTSGKPLPEENLKKTVDACDRALALDLAKKKVLDFVESRMGYIAPNLSAIVG 264

Query: 1887 SXXXXXXXXXXXXXXXXXKMPACKVQLLGAEEKILAGLSSA----HVGFLQETDILQGTP 2054
            S                 KMPAC VQLLGA++K LAG S+A     VG++++T+I Q TP
Sbjct: 265  SAVAAKLMGTAGGLTALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTP 324

Query: 2055 PLLNQRACRILASQSVVAARMDFKRCNPTGNTGRQFRKQILKKIEKWQE--------PLP 2210
            P L  RACR+LA++S ++AR+D  R +PTG TGR  R++ILKKIEKWQE        PLP
Sbjct: 325  PSLRMRACRLLAAKSTLSARVDSTRGDPTGKTGRTLREEILKKIEKWQEPPPAKQPKPLP 384

Query: 2211 VRDADHXXXXXXXXXXXXXXXYGVTNTRELVNQIQFGLPEESFLDDRFGEGYGMLGPSGS 2390
            V D++                Y +T+ R+L N++QFG+PEES L D  GEGYGMLG +G+
Sbjct: 385  VPDSEPKKKRGGRRLRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGN 444

Query: 2391 -EVRLPIRWRRLVAHFTKKFKDMHVVRSGASTGFTSCQAFTHAQ 2519
             ++R+ +   +L A   KKFK+     SGA++G TS  AFT  Q
Sbjct: 445  GKLRVSVGQSKLAAKVAKKFKEKQYGSSGATSGLTSSLAFTPVQ 488


>ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Vitis
            vinifera]
          Length = 489

 Score =  345 bits (886), Expect = 3e-92
 Identities = 187/344 (54%), Positives = 237/344 (68%), Gaps = 15/344 (4%)
 Frame = +3

Query: 1533 VDNEIVTVHNFIRSHYRHKFTELESLVPHPVDYARVVKKIGNETDLTLVDLQGLLPSNSI 1712
            ++NEIV +HNFIR +YR KF ELESLV HP+DYARVVKKIGNE DLTLVDL+GLLPS  I
Sbjct: 111  IENEIVIIHNFIRDNYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAII 170

Query: 1713 M--AVIASTTSGKLLPEENLKKTIDACDCILSLDLGKNKVLEFLESILGYVAPNLAVLVG 1886
            M  +V ASTTSGK LPEENLKKT+DACD  L+LDL K KVL+F+ES +GY+APNL+ +VG
Sbjct: 171  MVVSVTASTTSGKPLPEENLKKTVDACDRALALDLAKKKVLDFVESRMGYIAPNLSAIVG 230

Query: 1887 SXXXXXXXXXXXXXXXXXKMPACKVQLLGAEEKILAGLSSA----HVGFLQETDILQGTP 2054
            S                 KMPAC VQLLGA++K LAG S+A     VG++++T+I Q TP
Sbjct: 231  SAVAAKLMGTAGGLTALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTP 290

Query: 2055 PLLNQRACRILASQSVVAARMDFKRCNPTGNTGRQFRKQILKKIEKWQE--------PLP 2210
            P L  RACR+LA++S ++AR+D  R +PTG TGR  R++ILKKIEKWQE        PLP
Sbjct: 291  PSLRMRACRLLAAKSTLSARVDSTRGDPTGKTGRTLREEILKKIEKWQEPPPAKQPKPLP 350

Query: 2211 VRDADHXXXXXXXXXXXXXXXYGVTNTRELVNQIQFGLPEESFLDDRFGEGYGMLGPSGS 2390
            V D++                Y +T+ R+L N++QFG+PEES L D  GEGYGMLG +G+
Sbjct: 351  VPDSEPKKKRGGRRLRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGN 410

Query: 2391 -EVRLPIRWRRLVAHFTKKFKDMHVVRSGASTGFTSCQAFTHAQ 2519
             ++R+ +   +L A   KKFK+     SGA++G TS  AFT  Q
Sbjct: 411  GKLRVSVGQSKLAAKVAKKFKEKQYGSSGATSGLTSSLAFTPVQ 454


>ref|XP_002525342.1| U4/U6 small nuclear ribonucleoprotein Prp31, putative [Ricinus
            communis] gi|223535305|gb|EEF36980.1| U4/U6 small nuclear
            ribonucleoprotein Prp31, putative [Ricinus communis]
          Length = 774

 Score =  335 bits (860), Expect = 3e-89
 Identities = 185/347 (53%), Positives = 235/347 (67%), Gaps = 15/347 (4%)
 Frame = +3

Query: 1533 VDNEIVTVHNFIRSHYRHKFTELESLVPHPVDYARVVKKIGNETDLTLVDLQGLLPSNSI 1712
            ++NEI+ +HNFIR  YR KF ELESLV HP+DYARVVKKIGNE DLTLVDL+GLLPS  I
Sbjct: 423  IENEIIIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAII 482

Query: 1713 M--AVIASTTSGKLLPEENLKKTIDACDCILSLDLGKNKVLEFLESILGYVAPNLAVLVG 1886
            M  +V ASTTSGK L EE L+KT+DACD  L+LD  K KVL+F+ES +GY+APNL+ +VG
Sbjct: 483  MVVSVTASTTSGKPLSEEVLQKTVDACDRALALDTAKKKVLDFVESRMGYIAPNLSAIVG 542

Query: 1887 SXXXXXXXXXXXXXXXXXKMPACKVQLLGAEEKILAGLSSA----HVGFLQETDILQGTP 2054
            S                 KMPAC VQLLGA++K LAG S+A     VG++++T++ Q TP
Sbjct: 543  SAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEVFQSTP 602

Query: 2055 PLLNQRACRILASQSVVAARMDFKRCNPTGNTGRQFRKQILKKIEKWQE--------PLP 2210
            P L  RACR+LA++S +AAR+D  R +P+GNTGR  R+ I KKIEKWQE        PLP
Sbjct: 603  PSLRIRACRLLAAKSTLAARIDSTRGDPSGNTGRTLREAIHKKIEKWQEPPPAKQPKPLP 662

Query: 2211 VRDADHXXXXXXXXXXXXXXXYGVTNTRELVNQIQFGLPEESFLDDRFGEGYGMLGPSGS 2390
            V D++                Y VT+ R+L N++QFG+PEES L D  GEGYGMLG +GS
Sbjct: 663  VPDSEPKKKRGGRRLRKMKERYAVTDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGS 722

Query: 2391 -EVRLPIRWRRLVAHFTKKFKDMHVVRSGASTGFTSCQAFTHAQVTI 2528
             ++R+ I   +L A   KKFK+     SGA++G TS  AFT  QV++
Sbjct: 723  GKLRVSIGQSKLAAKVAKKFKEKQYGSSGATSGLTSSLAFTPVQVSL 769


>ref|XP_003547677.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Glycine
            max]
          Length = 486

 Score =  333 bits (853), Expect = 2e-88
 Identities = 187/364 (51%), Positives = 239/364 (65%), Gaps = 15/364 (4%)
 Frame = +3

Query: 1533 VDNEIVTVHNFIRSHYRHKFTELESLVPHPVDYARVVKKIGNETDLTLVDLQGLLPSNSI 1712
            ++NEIV +HNFIR  YR KF ELESLV HP+DYARVVKKIGNE DLTLVDL+GLLPS  I
Sbjct: 108  IENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAII 167

Query: 1713 M--AVIASTTSGKLLPEENLKKTIDACDCILSLDLGKNKVLEFLESILGYVAPNLAVLVG 1886
            M  +V ASTT+GK LPEE L KT++ACD  L LD  K KVL+F+ES +GY+APNL+ +VG
Sbjct: 168  MVVSVTASTTTGKPLPEEVLSKTVEACDRALDLDSAKKKVLDFVESRMGYIAPNLSAIVG 227

Query: 1887 SXXXXXXXXXXXXXXXXXKMPACKVQLLGAEEKILAGLSSA----HVGFLQETDILQGTP 2054
            S                 KMPAC VQLLGA++K LAG S+A     VG+L++T+I Q TP
Sbjct: 228  SAVAAKLMGTAGGLASLAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQTTP 287

Query: 2055 PLLNQRACRILASQSVVAARMDFKRCNPTGNTGRQFRKQILKKIEKWQE--------PLP 2210
            P L  RACR+LA++S +AAR+D  R +P+G TGR F+ +I KKIEKWQE        PLP
Sbjct: 288  PSLRMRACRLLAAKSTLAARVDSIRGDPSGKTGRAFKDEIHKKIEKWQEPPPAKQPKPLP 347

Query: 2211 VRDADHXXXXXXXXXXXXXXXYGVTNTRELVNQIQFGLPEESFLDDRFGEGYGMLGPSGS 2390
            V D++                Y +T+ R+L N++QFG+PEES L D  GEGYGMLG +GS
Sbjct: 348  VPDSEPKKKRGGRRLRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGS 407

Query: 2391 -EVRLPIRWRRLVAHFTKKFKDMHVVRSGASTGFTSCQAFTHAQVTIEIY*VTLTRRIGH 2567
             ++R+ +   +L A   KKFK+ +   SGA++G TS  AFT  Q       + LT    H
Sbjct: 408  GKLRVSVGQSKLAAKVAKKFKEKNYGSSGATSGLTSSLAFTPVQG------IELTNPQAH 461

Query: 2568 GYEL 2579
             ++L
Sbjct: 462  AHQL 465


>ref|XP_003553898.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Glycine
            max]
          Length = 486

 Score =  332 bits (851), Expect = 3e-88
 Identities = 183/344 (53%), Positives = 232/344 (67%), Gaps = 15/344 (4%)
 Frame = +3

Query: 1533 VDNEIVTVHNFIRSHYRHKFTELESLVPHPVDYARVVKKIGNETDLTLVDLQGLLPSNSI 1712
            ++NEIV +HNFIR  YR KF ELESLV HP+DYARVVKKIGNE DLTLVDL+GLLPS  I
Sbjct: 108  IENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAII 167

Query: 1713 M--AVIASTTSGKLLPEENLKKTIDACDCILSLDLGKNKVLEFLESILGYVAPNLAVLVG 1886
            M  +V ASTT+GK LPEE L KT++ACD  L LD  K KVL+F+ES +GY+APNL+ +VG
Sbjct: 168  MVVSVTASTTTGKPLPEEVLSKTVEACDRALDLDSAKKKVLDFVESRMGYIAPNLSAIVG 227

Query: 1887 SXXXXXXXXXXXXXXXXXKMPACKVQLLGAEEKILAGLSSA----HVGFLQETDILQGTP 2054
            S                 KMPAC VQLLGA++K LAG S+A     VG+L++T+I Q TP
Sbjct: 228  SAVAAKLMGTAGGLASLAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQTTP 287

Query: 2055 PLLNQRACRILASQSVVAARMDFKRCNPTGNTGRQFRKQILKKIEKWQE--------PLP 2210
            P L  RACR+LA++S +AAR+D  R +P+G TGR F+ +I KKIEKWQE        PLP
Sbjct: 288  PSLRMRACRLLAAKSTLAARVDSIRGDPSGKTGRAFKDEIHKKIEKWQEPPPAKQPKPLP 347

Query: 2211 VRDADHXXXXXXXXXXXXXXXYGVTNTRELVNQIQFGLPEESFLDDRFGEGYGMLGPSGS 2390
            V D++                Y +T+ R+L N++QFG+PEES L D  GEGYGMLG +GS
Sbjct: 348  VPDSEPKKKRGGRRLRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGS 407

Query: 2391 -EVRLPIRWRRLVAHFTKKFKDMHVVRSGASTGFTSCQAFTHAQ 2519
             ++R+ +   +L A   KKFK+ +   SGA++G TS  AFT  Q
Sbjct: 408  GKLRVSVGQSKLAAKVAKKFKEKNYGSSGATSGLTSSLAFTPVQ 451