BLASTX nr result

ID: Coptis24_contig00004130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004130
         (1408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280448.1| PREDICTED: uncharacterized protein LOC100247...   461   e-127
emb|CAN74782.1| hypothetical protein VITISV_016425 [Vitis vinifera]   461   e-127
ref|XP_002326518.1| predicted protein [Populus trichocarpa] gi|2...   452   e-125
ref|XP_002519822.1| conserved hypothetical protein [Ricinus comm...   444   e-122
ref|XP_003517371.1| PREDICTED: uncharacterized protein LOC100787...   440   e-121

>ref|XP_002280448.1| PREDICTED: uncharacterized protein LOC100247252 [Vitis vinifera]
            gi|297742104|emb|CBI33891.3| unnamed protein product
            [Vitis vinifera]
          Length = 367

 Score =  461 bits (1187), Expect = e-127
 Identities = 247/355 (69%), Positives = 276/355 (77%), Gaps = 2/355 (0%)
 Frame = -3

Query: 1313 MELPLICRTQHSLPLPSFKTTLTSNHF-VFHTTKYGRITRRSRGSNGLSVCSKAASDRSS 1137
            ME+PLI RT H  P  SF ++     F V   TK    ++R  G        +A+++RS 
Sbjct: 1    MEIPLISRTPHP-PTTSFCSSSGGAGFCVLPATKKRNESKRCFGG-----FVRASAERSR 54

Query: 1136 EGIDGGSREGDHGS-FSGSAMEVTSFNQSFSSDAEFPVWEKLGAIVRLSYGIGIYGAMAV 960
            EGIDGG REG+ G  F+  AMEVT+ N+SF+ D EFPVWEK+GA+VRLSYGIGIYGAMA+
Sbjct: 55   EGIDGG-REGERGGGFTSPAMEVTTLNRSFN-DTEFPVWEKIGAVVRLSYGIGIYGAMAL 112

Query: 959  AGTFICSFTGIDSIGGFHPSIDAILEGLGYAVPPIMALLFILDDEVVKLSPHCRAIRDVE 780
            AG FICS TGIDS+GGF+PS+DAILEGLGYA PPIMALLFILDDEVVKLSPH RAIRDVE
Sbjct: 113  AGRFICSMTGIDSMGGFNPSLDAILEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDVE 172

Query: 779  DEELRSFFYGMSPWQFILIVTASSIGEELFYRAAVQGALADIFLRGTELMTDARGIACLT 600
            DEE+RSFFYGMSPWQFIL+V ASS+GEELFYRAA+QGALADIFLRGT  +TDARG+  LT
Sbjct: 173  DEEIRSFFYGMSPWQFILMVAASSVGEELFYRAAIQGALADIFLRGTNFVTDARGMTSLT 232

Query: 599  GXXXXXXXXXXXXXXXXXXALTGSLYYVAASPKDPTYVVAPVLQTRSGREDLKKLFAAWY 420
            G                  ALTGSLYYVAASPKDPTYVVAPVLQ+RSGR DLKKLFAAWY
Sbjct: 233  GVLPPFVPFAQAFAAVITAALTGSLYYVAASPKDPTYVVAPVLQSRSGRADLKKLFAAWY 292

Query: 419  ERRQMKKIYSPXXXXXXXXXLGFEWIQTNNILCPMITHGIYSAVILGHGLWKIND 255
            ERRQMKKIYSP         LGFEWIQTNNIL P+ITHGIYS VILGHGLWKI+D
Sbjct: 293  ERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSTVILGHGLWKIHD 347


>emb|CAN74782.1| hypothetical protein VITISV_016425 [Vitis vinifera]
          Length = 367

 Score =  461 bits (1187), Expect = e-127
 Identities = 247/355 (69%), Positives = 276/355 (77%), Gaps = 2/355 (0%)
 Frame = -3

Query: 1313 MELPLICRTQHSLPLPSFKTTLTSNHF-VFHTTKYGRITRRSRGSNGLSVCSKAASDRSS 1137
            ME+PLI RT H  P  SF ++     F V   TK    ++R  G        +A+++RS 
Sbjct: 1    MEIPLISRTPHP-PTTSFCSSSGGAGFCVLPATKKRNESKRCFGG-----FVRASAERSR 54

Query: 1136 EGIDGGSREGDHGS-FSGSAMEVTSFNQSFSSDAEFPVWEKLGAIVRLSYGIGIYGAMAV 960
            EGIDGG REG+ G  F+  AMEVT+ N+SF+ D EFPVWEK+GA+VRLSYGIGIYGAMA+
Sbjct: 55   EGIDGG-REGERGGGFTSPAMEVTTLNRSFN-DTEFPVWEKIGAVVRLSYGIGIYGAMAL 112

Query: 959  AGTFICSFTGIDSIGGFHPSIDAILEGLGYAVPPIMALLFILDDEVVKLSPHCRAIRDVE 780
            AG FICS TGIDS+GGF+PS+DAILEGLGYA PPIMALLFILDDEVVKLSPH RAIRDVE
Sbjct: 113  AGRFICSMTGIDSMGGFNPSLDAILEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDVE 172

Query: 779  DEELRSFFYGMSPWQFILIVTASSIGEELFYRAAVQGALADIFLRGTELMTDARGIACLT 600
            DEE+RSFFYGMSPWQFIL+V ASS+GEELFYRAA+QGALADIFLRGT  +TDARG+  LT
Sbjct: 173  DEEIRSFFYGMSPWQFILMVAASSVGEELFYRAAIQGALADIFLRGTNFVTDARGMTSLT 232

Query: 599  GXXXXXXXXXXXXXXXXXXALTGSLYYVAASPKDPTYVVAPVLQTRSGREDLKKLFAAWY 420
            G                  ALTGSLYYVAASPKDPTYVVAPVLQ+RSGR DLKKLFAAWY
Sbjct: 233  GVLPPFVPFAQAFAAVITAALTGSLYYVAASPKDPTYVVAPVLQSRSGRADLKKLFAAWY 292

Query: 419  ERRQMKKIYSPXXXXXXXXXLGFEWIQTNNILCPMITHGIYSAVILGHGLWKIND 255
            ERRQMKKIYSP         LGFEWIQTNNIL P+ITHGIYS VILGHGLWKI+D
Sbjct: 293  ERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSTVILGHGLWKIHD 347


>ref|XP_002326518.1| predicted protein [Populus trichocarpa] gi|222833840|gb|EEE72317.1|
            predicted protein [Populus trichocarpa]
          Length = 382

 Score =  452 bits (1164), Expect = e-125
 Identities = 244/382 (63%), Positives = 275/382 (71%), Gaps = 8/382 (2%)
 Frame = -3

Query: 1313 MELPLICRT-QHSLPLPSFKTTLTSNHFVFHTTK-----YGRITRRSRGSNGLSV-CSKA 1155
            MELPL+ RT  HS    +  TT       F  T        R+  R  G N + + CSKA
Sbjct: 1    MELPLLFRTPSHSSTATATATTSFRVGAWFSKTSDLPASRRRLNLRENGVNRIQIRCSKA 60

Query: 1154 ASDRSSEGIDGGSREGDHGSFSGSAMEVTSFNQSFSSDA-EFPVWEKLGAIVRLSYGIGI 978
            +++R+  G +G   E +   F+GSAMEVT+F+QSF   A +FP+WEK+GA+VRL YGIGI
Sbjct: 61   STERTGAGSEG-IEERERRRFTGSAMEVTTFDQSFGDAASDFPLWEKIGAVVRLCYGIGI 119

Query: 977  YGAMAVAGTFICSFTGIDSIGGFHPSIDAILEGLGYAVPPIMALLFILDDEVVKLSPHCR 798
            YG MA+AG FICS TGIDS+GGF+PS+DA LEGLGYA PP+MALLFILDDEVVKLSPH R
Sbjct: 120  YGGMALAGRFICSITGIDSLGGFNPSLDAFLEGLGYAAPPVMALLFILDDEVVKLSPHAR 179

Query: 797  AIRDVEDEELRSFFYGMSPWQFILIVTASSIGEELFYRAAVQGALADIFLRGTELMTDAR 618
            AIRDVEDEELR+FFYGMSPWQFILIV ASS+GEELFYRAAVQGALADIFLRGT LM DAR
Sbjct: 180  AIRDVEDEELRNFFYGMSPWQFILIVAASSVGEELFYRAAVQGALADIFLRGTNLMEDAR 239

Query: 617  GIACLTGXXXXXXXXXXXXXXXXXXALTGSLYYVAASPKDPTYVVAPVLQTRSGREDLKK 438
            G+A LTG                   LTGSLYYVA SPKDPTYVVAPVL + SGREDLKK
Sbjct: 240  GMASLTGVLPPFVPFAQAFAAVLTAVLTGSLYYVATSPKDPTYVVAPVLPSYSGREDLKK 299

Query: 437  LFAAWYERRQMKKIYSPXXXXXXXXXLGFEWIQTNNILCPMITHGIYSAVILGHGLWKIN 258
            LFAAWYERRQMKKIYSP         LGFEWIQTNNIL P+ITHGIYSAV+LGHGLWKI+
Sbjct: 300  LFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSAVVLGHGLWKIH 359

Query: 257  DQXXXXXXXXXXXXLEGRNSNK 192
            +              E  NSNK
Sbjct: 360  EHRRRLRRRIQLLKSEEMNSNK 381


>ref|XP_002519822.1| conserved hypothetical protein [Ricinus communis]
            gi|223540868|gb|EEF42426.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 380

 Score =  444 bits (1142), Expect = e-122
 Identities = 240/365 (65%), Positives = 278/365 (76%), Gaps = 12/365 (3%)
 Frame = -3

Query: 1313 MELPLICRTQHSLPLPSFKTTLTSNHFVFHTTKYGRITRRSRGSNGLSV----------C 1164
            MEL L+ RT +     SF   + S   +   + +    +RS G N  +           C
Sbjct: 1    MELALVSRTPNQ-SAASFSGGIASFSRI---SNFAAARKRSDGYNNNNNNNNRRVVQVRC 56

Query: 1163 SKAASDRSS-EGIDGGSREGDH-GSFSGSAMEVTSFNQSFSSDAEFPVWEKLGAIVRLSY 990
            +KA+S+ SS EG+    REG   G F+GSAMEVT+F++SF+ + EFPVWEK+GA+VRLSY
Sbjct: 57   AKASSESSSSEGMK--EREGTRRGGFTGSAMEVTTFDRSFT-ETEFPVWEKIGAVVRLSY 113

Query: 989  GIGIYGAMAVAGTFICSFTGIDSIGGFHPSIDAILEGLGYAVPPIMALLFILDDEVVKLS 810
            GIGIYG MA+AG FICS TGIDS+GGF+P++DA+LEGLGYA PPIMALLFILDDEVVK+S
Sbjct: 114  GIGIYGGMALAGRFICSITGIDSMGGFNPTLDAVLEGLGYASPPIMALLFILDDEVVKVS 173

Query: 809  PHCRAIRDVEDEELRSFFYGMSPWQFILIVTASSIGEELFYRAAVQGALADIFLRGTELM 630
            PH RAIRDVEDEELRSFFYGMSPWQF+LIV ASS+GEELFYRAAVQGALADIFLRGT+LM
Sbjct: 174  PHARAIRDVEDEELRSFFYGMSPWQFMLIVVASSVGEELFYRAAVQGALADIFLRGTDLM 233

Query: 629  TDARGIACLTGXXXXXXXXXXXXXXXXXXALTGSLYYVAASPKDPTYVVAPVLQTRSGRE 450
             DARG+A LTG                  ALTGSLYYVAASPKDPTYV+APVLQ++SG +
Sbjct: 234  ADARGMASLTGVLPPFVPFAQAFAAALTAALTGSLYYVAASPKDPTYVIAPVLQSQSGCD 293

Query: 449  DLKKLFAAWYERRQMKKIYSPXXXXXXXXXLGFEWIQTNNILCPMITHGIYSAVILGHGL 270
            DL+KLFAAWYERRQMKKIYSP         LGFEWIQTNNIL PMITHGIYSAV+LGHGL
Sbjct: 294  DLRKLFAAWYERRQMKKIYSPLLEGLLALYLGFEWIQTNNILAPMITHGIYSAVVLGHGL 353

Query: 269  WKIND 255
            WKI+D
Sbjct: 354  WKIHD 358


>ref|XP_003517371.1| PREDICTED: uncharacterized protein LOC100787147 isoform 2 [Glycine
            max]
          Length = 372

 Score =  440 bits (1131), Expect = e-121
 Identities = 226/325 (69%), Positives = 253/325 (77%), Gaps = 1/325 (0%)
 Frame = -3

Query: 1166 CSKAASDRSSEGIDGGSREGDHGSFSGSAMEVTSFNQS-FSSDAEFPVWEKLGAIVRLSY 990
            C KA+++R+ + ID G        F+  AMEVT+FN+S FS  A+FPVWEK+GA+VRLSY
Sbjct: 51   CVKASAERTGDTIDDGEARS---GFTTPAMEVTTFNRSTFSDAADFPVWEKIGAVVRLSY 107

Query: 989  GIGIYGAMAVAGTFICSFTGIDSIGGFHPSIDAILEGLGYAVPPIMALLFILDDEVVKLS 810
            GIGIYGAMAVAG+FICS TGIDS+GGFH S+DAILEGLGYA PPIMALLFILDDEVVKLS
Sbjct: 108  GIGIYGAMAVAGSFICSITGIDSLGGFHLSLDAILEGLGYAAPPIMALLFILDDEVVKLS 167

Query: 809  PHCRAIRDVEDEELRSFFYGMSPWQFILIVTASSIGEELFYRAAVQGALADIFLRGTELM 630
            PH RAIRDVEDEEL SFFYGMSPWQFIL+V ASS+GEELFYRAAVQGALADIFLRG+ L+
Sbjct: 168  PHARAIRDVEDEELWSFFYGMSPWQFILMVAASSVGEELFYRAAVQGALADIFLRGSNLI 227

Query: 629  TDARGIACLTGXXXXXXXXXXXXXXXXXXALTGSLYYVAASPKDPTYVVAPVLQTRSGRE 450
            TD +G+A LTG                   LTGSLYY+AASPKDPTYVVAPVLQ+RSGR+
Sbjct: 228  TDVQGMASLTGVLPPFVPFAQAFAAVLTAVLTGSLYYMAASPKDPTYVVAPVLQSRSGRQ 287

Query: 449  DLKKLFAAWYERRQMKKIYSPXXXXXXXXXLGFEWIQTNNILCPMITHGIYSAVILGHGL 270
            DLKKLF AWYE+RQMKKIYSP         LGFEWIQT+NIL P+ITHGIYS VILGHGL
Sbjct: 288  DLKKLFEAWYEKRQMKKIYSPLLEGLLALYLGFEWIQTDNILAPIITHGIYSTVILGHGL 347

Query: 269  WKINDQXXXXXXXXXXXXLEGRNSN 195
            WKIND              E +NSN
Sbjct: 348  WKINDHRRRLRQRIQQLKSEEKNSN 372


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