BLASTX nr result
ID: Coptis24_contig00004120
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004120 (358 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002329780.1| predicted protein [Populus trichocarpa] gi|2... 87 1e-32 ref|XP_002305797.1| predicted protein [Populus trichocarpa] gi|2... 84 6e-32 ref|XP_002525115.1| ketol-acid reductoisomerase, chloroplast pre... 84 6e-32 dbj|BAD14373.1| hypothetical protein [Solanum melongena] 82 4e-31 ref|NP_001169144.1| uncharacterized protein LOC100382989 [Zea ma... 81 5e-31 >ref|XP_002329780.1| predicted protein [Populus trichocarpa] gi|222870842|gb|EEF07973.1| predicted protein [Populus trichocarpa] Length = 525 Score = 86.7 bits (213), Expect(2) = 1e-32 Identities = 43/44 (97%), Positives = 43/44 (97%) Frame = +3 Query: 3 RKGSSSFAEARGAGFTEENGTLGDIWETVSGSDLVLLLISDAAQ 134 RKGS SFAEARGAGFTEENGTLGDIWETVSGSDLVLLLISDAAQ Sbjct: 90 RKGSRSFAEARGAGFTEENGTLGDIWETVSGSDLVLLLISDAAQ 133 Score = 78.2 bits (191), Expect(2) = 1e-32 Identities = 38/54 (70%), Positives = 40/54 (74%) Frame = +2 Query: 197 ISDAAQADNYERIFSHMKPNSIXXXXXXXXXXXXQSVGSDFPKNVSVIAVCPKG 358 ISDAAQADNYE+IFSHMKPNSI QS G DFPKN+SVIAVCPKG Sbjct: 128 ISDAAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSTGLDFPKNISVIAVCPKG 181 >ref|XP_002305797.1| predicted protein [Populus trichocarpa] gi|222848761|gb|EEE86308.1| predicted protein [Populus trichocarpa] Length = 589 Score = 84.3 bits (207), Expect(2) = 6e-32 Identities = 42/44 (95%), Positives = 42/44 (95%) Frame = +3 Query: 3 RKGSSSFAEARGAGFTEENGTLGDIWETVSGSDLVLLLISDAAQ 134 RKGS SFAEAR AGFTEENGTLGDIWETVSGSDLVLLLISDAAQ Sbjct: 154 RKGSRSFAEARAAGFTEENGTLGDIWETVSGSDLVLLLISDAAQ 197 Score = 78.2 bits (191), Expect(2) = 6e-32 Identities = 37/54 (68%), Positives = 41/54 (75%) Frame = +2 Query: 197 ISDAAQADNYERIFSHMKPNSIXXXXXXXXXXXXQSVGSDFPKNVSVIAVCPKG 358 ISDAAQADNYE++FSHMKPNSI QS+G DFPKN+SVIAVCPKG Sbjct: 192 ISDAAQADNYEKVFSHMKPNSILGLSHGFLLGHLQSMGLDFPKNISVIAVCPKG 245 >ref|XP_002525115.1| ketol-acid reductoisomerase, chloroplast precursor, putative [Ricinus communis] gi|223535574|gb|EEF37242.1| ketol-acid reductoisomerase, chloroplast precursor, putative [Ricinus communis] Length = 584 Score = 84.3 bits (207), Expect(2) = 6e-32 Identities = 42/44 (95%), Positives = 42/44 (95%) Frame = +3 Query: 3 RKGSSSFAEARGAGFTEENGTLGDIWETVSGSDLVLLLISDAAQ 134 RKGS SFAEAR AGFTEENGTLGDIWETVSGSDLVLLLISDAAQ Sbjct: 149 RKGSRSFAEARSAGFTEENGTLGDIWETVSGSDLVLLLISDAAQ 192 Score = 78.2 bits (191), Expect(2) = 6e-32 Identities = 37/54 (68%), Positives = 41/54 (75%) Frame = +2 Query: 197 ISDAAQADNYERIFSHMKPNSIXXXXXXXXXXXXQSVGSDFPKNVSVIAVCPKG 358 ISDAAQADNYE++FSHMKPNSI QS+G DFPKN+SVIAVCPKG Sbjct: 187 ISDAAQADNYEKVFSHMKPNSILGLSHGFLLGHLQSMGLDFPKNISVIAVCPKG 240 >dbj|BAD14373.1| hypothetical protein [Solanum melongena] Length = 168 Score = 81.6 bits (200), Expect(2) = 4e-31 Identities = 41/44 (93%), Positives = 43/44 (97%) Frame = +3 Query: 3 RKGSSSFAEARGAGFTEENGTLGDIWETVSGSDLVLLLISDAAQ 134 RKGSSSFAEAR AGFTEENGTLGDI+ET+SGSDLVLLLISDAAQ Sbjct: 56 RKGSSSFAEARTAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 99 Score = 78.2 bits (191), Expect(2) = 4e-31 Identities = 37/54 (68%), Positives = 41/54 (75%) Frame = +2 Query: 197 ISDAAQADNYERIFSHMKPNSIXXXXXXXXXXXXQSVGSDFPKNVSVIAVCPKG 358 ISDAAQADNYE++FSHMKPNSI QS+G DFPKN+SVIAVCPKG Sbjct: 94 ISDAAQADNYEKVFSHMKPNSILGLSHGFLLGHLQSMGLDFPKNISVIAVCPKG 147 >ref|NP_001169144.1| uncharacterized protein LOC100382989 [Zea mays] gi|223975139|gb|ACN31757.1| unknown [Zea mays] Length = 525 Score = 80.9 bits (198), Expect(2) = 5e-31 Identities = 40/44 (90%), Positives = 41/44 (93%) Frame = +3 Query: 3 RKGSSSFAEARGAGFTEENGTLGDIWETVSGSDLVLLLISDAAQ 134 RKGS SF EAR AGFTEE+GTLGDIWETVSGSDLVLLLISDAAQ Sbjct: 91 RKGSKSFEEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQ 134 Score = 78.6 bits (192), Expect(2) = 5e-31 Identities = 38/54 (70%), Positives = 41/54 (75%) Frame = +2 Query: 197 ISDAAQADNYERIFSHMKPNSIXXXXXXXXXXXXQSVGSDFPKNVSVIAVCPKG 358 ISDAAQADNYE+IFSHMKPNSI QS+G DFPKN+SVIAVCPKG Sbjct: 129 ISDAAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSLGLDFPKNISVIAVCPKG 182