BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004113
         (1357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23170.3| unnamed protein product [Vitis vinifera]              587   e-165
ref|XP_004155668.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   544   e-152
dbj|BAK06716.1| predicted protein [Hordeum vulgare subsp. vulgare]    535   e-149
ref|XP_003562996.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   535   e-149
ref|NP_001059844.1| Os07g0530100 [Oryza sativa Japonica Group] g...   533   e-149

>emb|CBI23170.3| unnamed protein product [Vitis vinifera]
          Length = 678

 Score =  587 bits (1514), Expect = e-165
 Identities = 292/468 (62%), Positives = 354/468 (75%), Gaps = 27/468 (5%)
 Frame = +2

Query: 35   KIGYLVPLTNNLEQDSSLPNLPIFQGLNILGRNDIHVADKRVSRKHVTLHGSTDGSAHAT 214
            +IG+LVPL  NLE+D+S P LPI  G N++GRN I V+DKR+SRKH+TL  S +GS  A 
Sbjct: 5    QIGFLVPLNRNLEEDTSTPKLPIPTGANVIGRNSISVSDKRLSRKHLTLIASGNGSVDAV 64

Query: 215  VESSNPVVIRNGDERKKLCYQEKGNVVDGDVIELIPGYHFFKYKLENVKQKCSVEFHESV 394
            VE +NPVV+ +G++RKKL   EK  + + D+IELIPG++FFKY +    +KC  + +   
Sbjct: 65   VEGTNPVVVASGNQRKKLRTGEKAVITNDDIIELIPGHYFFKY-VTVAGEKCEKKGNSM- 122

Query: 395  LVEERVIVETQEVGLKRKR--QIEDDEAYARTLQVE-------------TGLA------- 508
               +   +E+ EV L RKR  Q+ +DEA+AR LQ E             TG +       
Sbjct: 123  ---DAQNMESNEVSLSRKRMRQVSEDEAFARKLQAEMENDVLVQERSLVTGKSGYSQAST 179

Query: 509  -----FHKDSEEIRHFSVPKDKLPLTFQLLRVRGLPSWANTSSVSIGDVIRGNVLLAVLS 673
                  H +SE IRHFS+PKD LPLT++LLRV+ LP+WANTSSVSI DVI+G+VL+AVLS
Sbjct: 180  ASIPSSHMNSEAIRHFSIPKDNLPLTYRLLRVKDLPAWANTSSVSIRDVIQGDVLIAVLS 239

Query: 674  NYMVDMDWLISVCPNLTKISRVLVLHGEGDGTLHHLEKNKPANWTLHKPPLPIAYGTHHS 853
            NYMVD+DWL+S CP L KI  VLV+HGEGDGTL H++KNKP NW LHKPPLPI++GTHHS
Sbjct: 240  NYMVDIDWLLSSCPTLAKIPHVLVIHGEGDGTLDHMKKNKPPNWILHKPPLPISFGTHHS 299

Query: 854  KAMLLVYPRGLRVVIHTSNLIHVDWNNKSQGLWMQDFPWKDKTYQSRGCGFENDLVDYLN 1033
            KAMLLVYPRG+RV++HT+NLI+VDWNNKSQGLWMQDFPWK +   S+GC FENDL+DYL+
Sbjct: 300  KAMLLVYPRGVRVIVHTANLIYVDWNNKSQGLWMQDFPWKVQKELSKGCAFENDLIDYLS 359

Query: 1034 ALKWPEFSVNLPDFGNVKINPSFFKKFDYSSAAVRLIASVPGYHNGPNLKKWGHMKLRTV 1213
             LKWPEF+ NLP  G+  IN SFFKKFDYS+A VRLIASVPGYH G NLKKWGHMKL +V
Sbjct: 360  VLKWPEFTANLPALGSFNINSSFFKKFDYSNAVVRLIASVPGYHTGSNLKKWGHMKLCSV 419

Query: 1214 LQECIFGKEFENSPLVYQFSSLGSLDEKWMAEFALSMSSGQSDDRKPL 1357
            LQECIF KEF+ SPL YQFSSLGSLDEKWM E A SMSSG  DD+ PL
Sbjct: 420  LQECIFDKEFQKSPLAYQFSSLGSLDEKWMTELASSMSSGSCDDKTPL 467


>ref|XP_004155668.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like [Cucumis sativus]
          Length = 959

 Score =  544 bits (1402), Expect = e-152
 Identities = 269/454 (59%), Positives = 337/454 (74%), Gaps = 13/454 (2%)
 Frame = +2

Query: 35   KIGYLVPLTNNLEQDSSLPNLPIFQGLNILGRNDIHVADKRVSRKHVTLHGSTDGSAHAT 214
            K+GYLVPL  NLE D+S   + + +G N +GR+++ V++KR+SRKH+TL  STDGSA   
Sbjct: 318  KVGYLVPLDKNLEVDNSGLKIRLSEGPNSIGRSNVLVSEKRISRKHITLTTSTDGSAKLL 377

Query: 215  VESSNPVVIRNGDERKKLCYQEKGNVVDGDVIELIPGYHFFKYKLENVKQKCSVEFHESV 394
            V+ +NPVVI +GD RKKL  +E   + DGDVIELIPG++ FKY       +   E     
Sbjct: 378  VDGTNPVVINSGDGRKKLGPRESVIIRDGDVIELIPGHYPFKYASHCFNSRPGSE----- 432

Query: 395  LVEERVIVETQEVGLKRKRQIEDDEAYARTLQ----------VETGLAFHKDS---EEIR 535
                       ++G KR RQ+  D+   R  +          +++G +  K++   E IR
Sbjct: 433  -----------DLGQKRVRQVAHDKISERVAKRAEMGSPLENMQSGSSKSKEANSVEAIR 481

Query: 536  HFSVPKDKLPLTFQLLRVRGLPSWANTSSVSIGDVIRGNVLLAVLSNYMVDMDWLISVCP 715
            +F +P D+LP+TF+LL V+GLP WANTS V I D+I+G++L AVLSNYMVD+DWLI  CP
Sbjct: 482  NFHIPDDRLPMTFRLLSVKGLPPWANTSCVRITDIIQGDILFAVLSNYMVDIDWLIPACP 541

Query: 716  NLTKISRVLVLHGEGDGTLHHLEKNKPANWTLHKPPLPIAYGTHHSKAMLLVYPRGLRVV 895
             L KI +VLV+HGEGDGTL ++++ KPANW LHKPPLPI++GTHHSKA+ LVYPRG+R+V
Sbjct: 542  TLAKIPQVLVIHGEGDGTLDNMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMV 601

Query: 896  IHTSNLIHVDWNNKSQGLWMQDFPWKDKTYQSRGCGFENDLVDYLNALKWPEFSVNLPDF 1075
            +HT+NLI+VDWNNKSQGLWMQDFPWKD+   SRGC FE+DLVDYL+ALKWPEF  + P  
Sbjct: 602  VHTANLIYVDWNNKSQGLWMQDFPWKDQNSSSRGCAFEDDLVDYLSALKWPEFPASFPGH 661

Query: 1076 GNVKINPSFFKKFDYSSAAVRLIASVPGYHNGPNLKKWGHMKLRTVLQECIFGKEFENSP 1255
            GN  INP FF+KFDYS AAVRLIASVPGYH G  LKKWGHMKLR+VLQECIF KEF+ SP
Sbjct: 662  GNFNINPYFFRKFDYSKAAVRLIASVPGYHTGRYLKKWGHMKLRSVLQECIFDKEFQRSP 721

Query: 1256 LVYQFSSLGSLDEKWMAEFALSMSSGQSDDRKPL 1357
            LVYQFSSLGSL+EKWMAEFA S+SSG + D+ PL
Sbjct: 722  LVYQFSSLGSLNEKWMAEFAASLSSGFTPDKTPL 755


>dbj|BAK06716.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  535 bits (1378), Expect = e-149
 Identities = 259/466 (55%), Positives = 335/466 (71%), Gaps = 21/466 (4%)
 Frame = +2

Query: 23   TSRVKIGYLVPLTNNLEQDSS-----LPNLPIFQGLNILGRNDIHVADKRVSRKHVTLHG 187
            +SRV++G LVP         +     +P++PIF+G N++GR+++   DKRVSRKH++L  
Sbjct: 4    SSRVRVGTLVPFVEGKSGSPNASSLPMPSIPIFEGSNVVGRSNLVAVDKRVSRKHLSLRA 63

Query: 188  STDGSAHATVESSNPVVIRNGDERKKLCYQEKGNVVDGDVIELIPGYHFFKYKLENVKQK 367
              DGS    VE +NP+V+R+  +R+K+C Q++  ++  DV+ELIPG +F KY   + ++K
Sbjct: 64   VPDGSVEVVVEGTNPIVVRSEGQRRKVCAQQRAKIMPDDVLELIPGEYFMKYVNMSDERK 123

Query: 368  CSVEFHESVLVEERVIVETQEVGLKRKRQIEDDEAYARTLQ----------------VET 499
             S       L + +   E   V  KR RQ+ +DEA ARTLQ                +++
Sbjct: 124  ISASVDSHDLKKGKRHSEEDSVAAKRNRQVMEDEALARTLQESFAEESASVTEVLSSLDS 183

Query: 500  GLAFHKDSEEIRHFSVPKDKLPLTFQLLRVRGLPSWANTSSVSIGDVIRGNVLLAVLSNY 679
              +  ++ E        KD LPL+F+L+RV+GLPSW NTS+V+I DVI+G VLLAVLSNY
Sbjct: 184  AGSSERNKERTHSVGPLKDVLPLSFRLMRVQGLPSWTNTSTVTIQDVIQGEVLLAVLSNY 243

Query: 680  MVDMDWLISVCPNLTKISRVLVLHGEGDGTLHHLEKNKPANWTLHKPPLPIAYGTHHSKA 859
            MVDMDWL++ CP+L K+  VLVLHGE   +L  L+K KP NW LHKPPLPI++GTHHSKA
Sbjct: 244  MVDMDWLLTACPSLRKVPHVLVLHGEDGASLERLKKTKPTNWILHKPPLPISFGTHHSKA 303

Query: 860  MLLVYPRGLRVVIHTSNLIHVDWNNKSQGLWMQDFPWKDKTYQSRGCGFENDLVDYLNAL 1039
            MLLVYP+G+RVV+HT+NLIHVDWNNKSQGLW QDFPWK+    S   GFENDLVDYL AL
Sbjct: 304  MLLVYPQGIRVVVHTANLIHVDWNNKSQGLWAQDFPWKEANDMSTNIGFENDLVDYLRAL 363

Query: 1040 KWPEFSVNLPDFGNVKINPSFFKKFDYSSAAVRLIASVPGYHNGPNLKKWGHMKLRTVLQ 1219
            KWPEF VNLP  G+V IN +FF+KFDYSS+ VRLI SVPGYH GPN+KKWGHMKLR+VL+
Sbjct: 364  KWPEFRVNLPVVGDVNINAAFFRKFDYSSSTVRLIGSVPGYHVGPNMKKWGHMKLRSVLE 423

Query: 1220 ECIFGKEFENSPLVYQFSSLGSLDEKWMAEFALSMSSGQSDDRKPL 1357
            EC+F K+F  SPL+YQFSSLGSLDEKWM+EFA S+S+G++DD   L
Sbjct: 424  ECVFEKQFCKSPLIYQFSSLGSLDEKWMSEFACSLSAGKADDGSQL 469


>ref|XP_003562996.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like [Brachypodium
            distachyon]
          Length = 671

 Score =  535 bits (1377), Expect = e-149
 Identities = 264/468 (56%), Positives = 340/468 (72%), Gaps = 23/468 (4%)
 Frame = +2

Query: 23   TSRVKIGYLVPLTNNLEQD--SSLPNLPIFQGLNILGRNDIHVADKRVSRKHVTLHGSTD 196
            +SRV++G LVP          +SLP++PIF+G N++GR+++ V DKRVSRKH++L  S D
Sbjct: 4    SSRVRVGTLVPFGEGKAGSLGASLPSIPIFEGSNVVGRSNLVVVDKRVSRKHLSLRVSAD 63

Query: 197  GSAHATVESSNPVVIRNGDERKKLCYQEKGNVVDGDVIELIPGYHFFKYKLENVKQKCSV 376
            GS    VE  NP+V+++  +R+++C +E+  ++  DV+ELIPG +F KY     + K S 
Sbjct: 64   GSIEVVVEGPNPIVVQSEGQRRRVCAKERAKIIHDDVLELIPGDYFVKYVNMGDEHKSST 123

Query: 377  EFHESVLVEERVIVETQEVGLKRKRQIEDDEAYARTLQVE--------TGLAF------- 511
                + L + +   E + V  KR RQI +DEA ARTLQ          TG+A        
Sbjct: 124  PVDSNDLKKGKRHREEECVVAKRNRQIVEDEALARTLQESFAEETMSATGMACVQVSSSL 183

Query: 512  ------HKDSEEIRHFSVPKDKLPLTFQLLRVRGLPSWANTSSVSIGDVIRGNVLLAVLS 673
                   +++E +      KD LPLTF+L+RV+GLPSW NTS+V+I DVI+G VLLAVLS
Sbjct: 184  DSAGSSERNNERMHSAGSLKDVLPLTFRLMRVQGLPSWTNTSAVTIQDVIQGEVLLAVLS 243

Query: 674  NYMVDMDWLISVCPNLTKISRVLVLHGEGDGTLHHLEKNKPANWTLHKPPLPIAYGTHHS 853
            NYMVDMDWL++ CP+L K+  VLVLHGE   +L HL+K+KPANW LHKPPLPI +GTHHS
Sbjct: 244  NYMVDMDWLLTACPSLRKVPHVLVLHGEDGASLEHLKKSKPANWILHKPPLPITFGTHHS 303

Query: 854  KAMLLVYPRGLRVVIHTSNLIHVDWNNKSQGLWMQDFPWKDKTYQSRGCGFENDLVDYLN 1033
            KAMLLVYP+G+RVV+HT+NLIHVDWNNKSQGLW QDFPWKD    ++   FE+DLVDYL+
Sbjct: 304  KAMLLVYPQGIRVVVHTANLIHVDWNNKSQGLWTQDFPWKDTKDMNKNISFESDLVDYLS 363

Query: 1034 ALKWPEFSVNLPDFGNVKINPSFFKKFDYSSAAVRLIASVPGYHNGPNLKKWGHMKLRTV 1213
            ALKWPEF + LP  G+V IN +FF+KFDYSS+ VRLI SVPGYH GPN+KKWGHMKLR+V
Sbjct: 364  ALKWPEFRIKLPVAGDVNINAAFFRKFDYSSSTVRLIGSVPGYHVGPNIKKWGHMKLRSV 423

Query: 1214 LQECIFGKEFENSPLVYQFSSLGSLDEKWMAEFALSMSSGQSDDRKPL 1357
            L+ C+F K+F  SPL+YQFSSLGSLDEKWM EFA S+S+G++DD  PL
Sbjct: 424  LEGCVFEKQFCKSPLIYQFSSLGSLDEKWMTEFACSLSAGKADDGSPL 471


>ref|NP_001059844.1| Os07g0530100 [Oryza sativa Japonica Group]
            gi|33146648|dbj|BAC79984.1| putative tyrosyl-DNA
            phosphodiesterase [Oryza sativa Japonica Group]
            gi|113611380|dbj|BAF21758.1| Os07g0530100 [Oryza sativa
            Japonica Group] gi|215697362|dbj|BAG91356.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|222637174|gb|EEE67306.1| hypothetical protein
            OsJ_24533 [Oryza sativa Japonica Group]
          Length = 671

 Score =  533 bits (1372), Expect = e-149
 Identities = 262/468 (55%), Positives = 338/468 (72%), Gaps = 23/468 (4%)
 Frame = +2

Query: 23   TSRVKIGYLVPLT--NNLEQDSSLPNLPIFQGLNILGRNDIHVADKRVSRKHVTLHGSTD 196
            +SRV++G LVPL   N    + S+ ++PI+ G N++GRN + V DKRVSRKH++LH S D
Sbjct: 4    SSRVRVGNLVPLNEGNASSSNGSVSSIPIYLGANVVGRNHLVVVDKRVSRKHLSLHASAD 63

Query: 197  GSAHATVESSNPVVIRNGDERKKLCYQEKGNVVDGDVIELIPGYHFFKYKLENVKQKCSV 376
            GS  A VE  NP+++R+  +R+K+C QE+  +   DV+ELIPG +F KY       K S 
Sbjct: 64   GSIEAVVEGPNPIIVRSEGQRRKVCAQERVKIAHDDVLELIPGEYFVKYLNVGDNHKSST 123

Query: 377  EFHESVLVEERVIVETQEVGLKRKRQIEDDEAYARTLQVE--------TGLAF------- 511
                S   + + + E   V +KR RQI +DEA AR+LQ          +GL         
Sbjct: 124  SMGSSDFKKGKRLCEDDTVVIKRNRQIMEDEALARSLQKSFAEESSTISGLGCDQMLSSL 183

Query: 512  ------HKDSEEIRHFSVPKDKLPLTFQLLRVRGLPSWANTSSVSIGDVIRGNVLLAVLS 673
                   +++E I      KD L LTF+L+RV+GLPSW NTSSV+I DVI+G VLLAVLS
Sbjct: 184  DSAGFSERNNERIHSVDYLKDVLSLTFRLMRVQGLPSWTNTSSVTIQDVIQGEVLLAVLS 243

Query: 674  NYMVDMDWLISVCPNLTKISRVLVLHGEGDGTLHHLEKNKPANWTLHKPPLPIAYGTHHS 853
            NYMVDM+WL++ CP+L K+  VLV+HGE   ++  L+K KPANW LHKPPLPI++GTHHS
Sbjct: 244  NYMVDMEWLLTACPSLRKVRHVLVIHGEDGASVELLKKVKPANWILHKPPLPISFGTHHS 303

Query: 854  KAMLLVYPRGLRVVIHTSNLIHVDWNNKSQGLWMQDFPWKDKTYQSRGCGFENDLVDYLN 1033
            KAMLLVYP+G+RVV+HT+NLIHVDWNNK+QGLWMQDFPWKD    +R   FENDLVDYL+
Sbjct: 304  KAMLLVYPQGIRVVVHTANLIHVDWNNKTQGLWMQDFPWKDAKDVNRSVSFENDLVDYLS 363

Query: 1034 ALKWPEFSVNLPDFGNVKINPSFFKKFDYSSAAVRLIASVPGYHNGPNLKKWGHMKLRTV 1213
            A+KWPEF VNLP  G+V IN +FF+KFDY S++VRLI SVPGYH GPN+KKWGHMKLR+V
Sbjct: 364  AIKWPEFRVNLPVVGDVNINAAFFRKFDYKSSSVRLIGSVPGYHVGPNIKKWGHMKLRSV 423

Query: 1214 LQECIFGKEFENSPLVYQFSSLGSLDEKWMAEFALSMSSGQSDDRKPL 1357
            L+ C F ++F  +P++YQFSSLGSLDEKWM+EFA S+S+G+SD+  PL
Sbjct: 424  LEGCTFEQQFCKAPMIYQFSSLGSLDEKWMSEFAFSLSAGKSDNGSPL 471