BLASTX nr result

ID: Coptis24_contig00004112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004112
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263692.1| PREDICTED: phosducin-like protein 3 [Vitis v...   264   3e-68
ref|XP_002509555.1| Phosducin, putative [Ricinus communis] gi|22...   253   5e-65
ref|XP_003540553.1| PREDICTED: viral IAP-associated factor homol...   252   8e-65
ref|XP_003594786.1| Phosducin-like protein [Medicago truncatula]...   251   1e-64
gb|ACU23612.1| unknown [Glycine max]                                  250   4e-64

>ref|XP_002263692.1| PREDICTED: phosducin-like protein 3 [Vitis vinifera]
           gi|296090246|emb|CBI40065.3| unnamed protein product
           [Vitis vinifera]
          Length = 252

 Score =  264 bits (674), Expect = 3e-68
 Identities = 133/197 (67%), Positives = 146/197 (74%), Gaps = 3/197 (1%)
 Frame = -3

Query: 946 MGDYHFVYKDLEGTSTQWDDIQTKLGNLXXXXXXXXXXXXXP---EDSKPKDKSWIHNKT 776
           M DYHFVYKD+EG STQWDDIQ KLGNL             P   + SKPKDKSWI  KT
Sbjct: 1   MADYHFVYKDVEGASTQWDDIQRKLGNLPPKDPPFKPPPFTPAPDDHSKPKDKSWIDQKT 60

Query: 775 XXXXXXXXXXXXXXXXXXXEEYRKKRLAEIKEATKVSRFGSVIPISGVDFVREVSQAESD 596
                              EEYRKKRLAE++EA K+SRFGSV+PISG DFVREVSQA SD
Sbjct: 61  EEELEDLEDDPDLDDHRFLEEYRKKRLAEMREAVKISRFGSVMPISGSDFVREVSQAPSD 120

Query: 595 VWVVVFLYKEGIAECGVVLNCLEELATKYPVTKFVKIVSTDCIQNYPDRNLPTLLVYNNG 416
           VWVVV LYKEGI ECG+++ CLEELAT+YP TKFVKI+STDCI NYPDRNLPTLLVYNNG
Sbjct: 121 VWVVVILYKEGIPECGLLMRCLEELATRYPATKFVKIISTDCIPNYPDRNLPTLLVYNNG 180

Query: 415 AVKATYVGMHHFGRRCT 365
           AVKA Y G+H+FGRRCT
Sbjct: 181 AVKANYAGLHNFGRRCT 197


>ref|XP_002509555.1| Phosducin, putative [Ricinus communis] gi|223549454|gb|EEF50942.1|
           Phosducin, putative [Ricinus communis]
          Length = 251

 Score =  253 bits (646), Expect = 5e-65
 Identities = 129/197 (65%), Positives = 142/197 (72%), Gaps = 3/197 (1%)
 Frame = -3

Query: 946 MGDYHFVYKDLEGTSTQWDDIQTKLGNLXXXXXXXXXXXXXP---EDSKPKDKSWIHNKT 776
           MGDYHF+YKD+EG STQWDDIQ KLGNL             P   EDS PKDKSWI NKT
Sbjct: 1   MGDYHFIYKDVEGASTQWDDIQRKLGNLPEKPPAFKPPPFTPAPDEDSIPKDKSWIDNKT 60

Query: 775 XXXXXXXXXXXXXXXXXXXEEYRKKRLAEIKEATKVSRFGSVIPISGVDFVREVSQAESD 596
                               EYRKKRLAE++E  K+ +FGSV+PISG DFVREVSQA SD
Sbjct: 61  QEDLEDLEDDLDDDRFLE--EYRKKRLAEMREEAKILKFGSVLPISGSDFVREVSQAPSD 118

Query: 595 VWVVVFLYKEGIAECGVVLNCLEELATKYPVTKFVKIVSTDCIQNYPDRNLPTLLVYNNG 416
           VWV+V LYK+G  ECGV+L CLEELAT+YP TKFVKI+STDCI NYPD NLPTLLVYNNG
Sbjct: 119 VWVIVLLYKDGYQECGVLLRCLEELATRYPATKFVKIISTDCIPNYPDYNLPTLLVYNNG 178

Query: 415 AVKATYVGMHHFGRRCT 365
           AVKA YVG+  FGRRCT
Sbjct: 179 AVKANYVGLRSFGRRCT 195


>ref|XP_003540553.1| PREDICTED: viral IAP-associated factor homolog [Glycine max]
          Length = 245

 Score =  252 bits (644), Expect = 8e-65
 Identities = 130/195 (66%), Positives = 142/195 (72%), Gaps = 1/195 (0%)
 Frame = -3

Query: 946 MGDYHFVYKDLEGTSTQWDDIQTKLGNLXXXXXXXXXXXXXP-EDSKPKDKSWIHNKTXX 770
           MGDYHFVYKDLEG STQWDDIQ KLGNL             P  D +PKDK+WI +KT  
Sbjct: 1   MGDYHFVYKDLEGASTQWDDIQRKLGNLPPKAPAFKPPPFTPASDDQPKDKTWIDSKTSE 60

Query: 769 XXXXXXXXXXXXXXXXXEEYRKKRLAEIKEATKVSRFGSVIPISGVDFVREVSQAESDVW 590
                             EYRKKRLAE++EA KV RFGSVIPISG DFVREVSQA SDVW
Sbjct: 61  ELEDLEDNLDDDRFLQ--EYRKKRLAEMQEAAKVLRFGSVIPISGSDFVREVSQAPSDVW 118

Query: 589 VVVFLYKEGIAECGVVLNCLEELATKYPVTKFVKIVSTDCIQNYPDRNLPTLLVYNNGAV 410
           VVV LYKEGI ECG+++  +EELA +YP TKFVKI+STDCI NYPDRNLPTLLVYNNGAV
Sbjct: 119 VVVILYKEGIPECGLLMQSIEELALRYPSTKFVKIISTDCIPNYPDRNLPTLLVYNNGAV 178

Query: 409 KATYVGMHHFGRRCT 365
           K  YVG+H FGRRCT
Sbjct: 179 KGNYVGLHSFGRRCT 193


>ref|XP_003594786.1| Phosducin-like protein [Medicago truncatula]
           gi|355483834|gb|AES65037.1| Phosducin-like protein
           [Medicago truncatula]
          Length = 250

 Score =  251 bits (642), Expect = 1e-64
 Identities = 131/197 (66%), Positives = 141/197 (71%), Gaps = 3/197 (1%)
 Frame = -3

Query: 946 MGDYHFVYKDLEGTSTQWDDIQTKLGNLXXXXXXXXXXXXXPE---DSKPKDKSWIHNKT 776
           MGDYHF+YKDLEG+STQWDDIQ KLGNL             P    DS PKDKSWI +KT
Sbjct: 1   MGDYHFIYKDLEGSSTQWDDIQAKLGNLPPKQPAFKPAPFSPATDPDSIPKDKSWIDSKT 60

Query: 775 XXXXXXXXXXXXXXXXXXXEEYRKKRLAEIKEATKVSRFGSVIPISGVDFVREVSQAESD 596
                               EYRKKRLAEI+EA KV R+GSV PISG DFVREVSQA SD
Sbjct: 61  HDELEDLEDDLDDDRFLQ--EYRKKRLAEIQEAAKVLRYGSVTPISGSDFVREVSQAPSD 118

Query: 595 VWVVVFLYKEGIAECGVVLNCLEELATKYPVTKFVKIVSTDCIQNYPDRNLPTLLVYNNG 416
           VWVVV LYK+GI ECGV++ C+EELAT YP TKFVKI+STDCI NYPD NLPTLLVYNNG
Sbjct: 119 VWVVVILYKDGIPECGVLMQCIEELATMYPATKFVKIISTDCIPNYPDCNLPTLLVYNNG 178

Query: 415 AVKATYVGMHHFGRRCT 365
           AVK  YVGM  FGRRCT
Sbjct: 179 AVKGNYVGMKRFGRRCT 195


>gb|ACU23612.1| unknown [Glycine max]
          Length = 245

 Score =  250 bits (638), Expect = 4e-64
 Identities = 129/195 (66%), Positives = 141/195 (72%), Gaps = 1/195 (0%)
 Frame = -3

Query: 946 MGDYHFVYKDLEGTSTQWDDIQTKLGNLXXXXXXXXXXXXXP-EDSKPKDKSWIHNKTXX 770
           MGDYHFVYKDLEG STQWDDIQ KLGNL             P  D +PKDK+WI +KT  
Sbjct: 1   MGDYHFVYKDLEGASTQWDDIQRKLGNLPPKAPAFKPPPFTPASDDQPKDKTWIDSKTSE 60

Query: 769 XXXXXXXXXXXXXXXXXEEYRKKRLAEIKEATKVSRFGSVIPISGVDFVREVSQAESDVW 590
                             EYRKKRLAE++EA KV RFGSVIPISG DFVREVSQA SDVW
Sbjct: 61  ELEDLEDNLDDDRFLQ--EYRKKRLAEMQEAAKVLRFGSVIPISGSDFVREVSQAPSDVW 118

Query: 589 VVVFLYKEGIAECGVVLNCLEELATKYPVTKFVKIVSTDCIQNYPDRNLPTLLVYNNGAV 410
           VVV LYKEGI ECG+++  +EELA +YP TKFVKI+ TDCI NYPDRNLPTLLVYNNGAV
Sbjct: 119 VVVILYKEGIPECGLLMQSIEELALRYPSTKFVKIIFTDCIPNYPDRNLPTLLVYNNGAV 178

Query: 409 KATYVGMHHFGRRCT 365
           K  YVG+H FGRRCT
Sbjct: 179 KGNYVGLHSFGRRCT 193


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