BLASTX nr result
ID: Coptis24_contig00004111
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004111 (1143 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263692.1| PREDICTED: phosducin-like protein 3 [Vitis v... 76 2e-11 ref|NP_001236870.1| uncharacterized protein LOC100527752 [Glycin... 70 8e-10 ref|XP_002509555.1| Phosducin, putative [Ricinus communis] gi|22... 68 5e-09 gb|AFK37591.1| unknown [Lotus japonicus] 67 6e-09 ref|XP_003564531.1| PREDICTED: viral IAP-associated factor homol... 67 6e-09 >ref|XP_002263692.1| PREDICTED: phosducin-like protein 3 [Vitis vinifera] gi|296090246|emb|CBI40065.3| unnamed protein product [Vitis vinifera] Length = 252 Score = 75.9 bits (185), Expect = 2e-11 Identities = 38/50 (76%), Positives = 42/50 (84%), Gaps = 5/50 (10%) Frame = -2 Query: 272 VLLCQSDPVLNDGQSGS-----DVIEGVRKRFIEKVVAQHEDDEDAYSSD 138 ++LCQSDPVLNDGQSGS DVIEGVRKRFIEKVV +HEDD+D SSD Sbjct: 203 LVLCQSDPVLNDGQSGSGPSREDVIEGVRKRFIEKVVTEHEDDDDGSSSD 252 >ref|NP_001236870.1| uncharacterized protein LOC100527752 [Glycine max] gi|255633114|gb|ACU16912.1| unknown [Glycine max] Length = 245 Score = 70.5 bits (171), Expect = 8e-10 Identities = 33/46 (71%), Positives = 41/46 (89%), Gaps = 1/46 (2%) Frame = -2 Query: 272 VLLCQSDPVLNDGQSGSD-VIEGVRKRFIEKVVAQHEDDEDAYSSD 138 ++LCQSDPVLNDG +G++ +IEGVRKRFIEKVVA HE+ +D YSSD Sbjct: 200 LVLCQSDPVLNDGHNGNEAIIEGVRKRFIEKVVADHEEGDDDYSSD 245 >ref|XP_002509555.1| Phosducin, putative [Ricinus communis] gi|223549454|gb|EEF50942.1| Phosducin, putative [Ricinus communis] Length = 251 Score = 67.8 bits (164), Expect = 5e-09 Identities = 34/49 (69%), Positives = 40/49 (81%), Gaps = 5/49 (10%) Frame = -2 Query: 272 VLLCQSDPVLNDGQSGSD-----VIEGVRKRFIEKVVAQHEDDEDAYSS 141 ++LCQSDPVLNDGQSGSD V+EGVR+R IEKVV +HEDD+D SS Sbjct: 201 LVLCQSDPVLNDGQSGSDPSREAVMEGVRRRLIEKVVKEHEDDDDKGSS 249 >gb|AFK37591.1| unknown [Lotus japonicus] Length = 114 Score = 67.4 bits (163), Expect = 6e-09 Identities = 34/50 (68%), Positives = 40/50 (80%), Gaps = 5/50 (10%) Frame = -2 Query: 272 VLLCQSDPVLNDGQSGSD-----VIEGVRKRFIEKVVAQHEDDEDAYSSD 138 ++LCQSDPVLNDGQSG++ VIEGVRKRFIEKVV HE+ ED +SD Sbjct: 65 LVLCQSDPVLNDGQSGNEQSREAVIEGVRKRFIEKVVLDHEEQEDDSTSD 114 >ref|XP_003564531.1| PREDICTED: viral IAP-associated factor homolog [Brachypodium distachyon] Length = 251 Score = 67.4 bits (163), Expect = 6e-09 Identities = 40/71 (56%), Positives = 43/71 (60%), Gaps = 5/71 (7%) Frame = -2 Query: 335 KGIYFNYCIFWLFLITAVCSCVLLCQSDPVLNDGQSGSD-----VIEGVRKRFIEKVVAQ 171 KG Y F T + LCQSDPVLNDGQ GSD VIEGVR++FIEKVVAQ Sbjct: 181 KGTYVGLQKFGGKKCTPESVALALCQSDPVLNDGQGGSDSSRNNVIEGVRRKFIEKVVAQ 240 Query: 170 HEDDEDAYSSD 138 HE ED SD Sbjct: 241 HEAREDEDDSD 251