BLASTX nr result

ID: Coptis24_contig00004109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004109
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525260.1| signal transducer, putative [Ricinus communi...    96   3e-18
emb|CBI22467.3| unnamed protein product [Vitis vinifera]               94   2e-17
ref|XP_002264153.1| PREDICTED: BTB/POZ domain-containing protein...    94   2e-17
emb|CAN66911.1| hypothetical protein VITISV_035422 [Vitis vinifera]    94   2e-17
ref|XP_002284345.1| PREDICTED: BTB/POZ domain-containing protein...    91   8e-17

>ref|XP_002525260.1| signal transducer, putative [Ricinus communis]
           gi|223535418|gb|EEF37088.1| signal transducer, putative
           [Ricinus communis]
          Length = 488

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/76 (61%), Positives = 57/76 (75%)
 Frame = -1

Query: 230 PDIPGNLRALLPQENGGSHGSSRTTMTNTEDDWDAVATAEELKALKGELASLRLGNGQSD 51
           P++PG +RALLP   GGSHGSSR+T TNTE+DWDAV TAE++KALKGEL +LRLG   ++
Sbjct: 363 PELPGPIRALLP---GGSHGSSRSTTTNTEEDWDAVPTAEDIKALKGELTTLRLGRSDTN 419

Query: 50  KNGGDNRSINKAAATK 3
            N G      KAAA K
Sbjct: 420 ANDGAKNDAEKAAANK 435


>emb|CBI22467.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 51/79 (64%), Positives = 61/79 (77%), Gaps = 3/79 (3%)
 Frame = -1

Query: 230 PDIPGNLRALLPQENGGSHGSSRTTMTNTEDDWDAVATAEELKALKGELASLRLGN--GQ 57
           PD+P  ++ L    N  SHGSSR+  TNTE+DWDAVAT EELKALKGELASLRLGN  G 
Sbjct: 400 PDLPKGIKDL----NSASHGSSRSVTTNTEEDWDAVATLEELKALKGELASLRLGNGVGA 455

Query: 56  SDKNGGDNR-SINKAAATK 3
           S++NGGD++ SI+KAA  K
Sbjct: 456 SERNGGDSKGSIDKAAINK 474


>ref|XP_002264153.1| PREDICTED: BTB/POZ domain-containing protein NPY2 [Vitis vinifera]
          Length = 626

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 51/79 (64%), Positives = 61/79 (77%), Gaps = 3/79 (3%)
 Frame = -1

Query: 230 PDIPGNLRALLPQENGGSHGSSRTTMTNTEDDWDAVATAEELKALKGELASLRLGN--GQ 57
           PD+P  ++ L    N  SHGSSR+  TNTE+DWDAVAT EELKALKGELASLRLGN  G 
Sbjct: 498 PDLPKGIKDL----NSASHGSSRSVTTNTEEDWDAVATLEELKALKGELASLRLGNGVGA 553

Query: 56  SDKNGGDNR-SINKAAATK 3
           S++NGGD++ SI+KAA  K
Sbjct: 554 SERNGGDSKGSIDKAAINK 572


>emb|CAN66911.1| hypothetical protein VITISV_035422 [Vitis vinifera]
          Length = 621

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 51/79 (64%), Positives = 61/79 (77%), Gaps = 3/79 (3%)
 Frame = -1

Query: 230 PDIPGNLRALLPQENGGSHGSSRTTMTNTEDDWDAVATAEELKALKGELASLRLGN--GQ 57
           PD+P  ++ L    N  SHGSSR+  TNTE+DWDAVAT EELKALKGELASLRLGN  G 
Sbjct: 493 PDLPKGIKDL----NSASHGSSRSVTTNTEEDWDAVATLEELKALKGELASLRLGNGVGA 548

Query: 56  SDKNGGDNR-SINKAAATK 3
           S++NGGD++ SI+KAA  K
Sbjct: 549 SERNGGDSKGSIDKAAINK 567


>ref|XP_002284345.1| PREDICTED: BTB/POZ domain-containing protein NPY2-like [Vitis
           vinifera]
          Length = 629

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 48/71 (67%), Positives = 57/71 (80%)
 Frame = -1

Query: 230 PDIPGNLRALLPQENGGSHGSSRTTMTNTEDDWDAVATAEELKALKGELASLRLGNGQSD 51
           PD+PG++RALLP   GGSHGSSR+  TNTE++WDAV TAEELKALKGELA+LRLG G   
Sbjct: 495 PDLPGSVRALLP---GGSHGSSRSATTNTEEEWDAVPTAEELKALKGELATLRLGAG--- 548

Query: 50  KNGGDNRSINK 18
             GG +RS N+
Sbjct: 549 VGGGSDRSGNE 559


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