BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004104
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81864.1| hypothetical protein VITISV_010591 [Vitis vinifera]    85   5e-15
ref|XP_003631250.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-...    77   1e-12
ref|XP_003601903.1| RING-H2 finger protein [Medicago truncatula]...    77   1e-12
ref|NP_001117565.1| RING/U-box domain-containing protein [Arabid...    77   1e-12
ref|XP_002314594.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12

>emb|CAN81864.1| hypothetical protein VITISV_010591 [Vitis vinifera]
          Length = 718

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 49/103 (47%), Positives = 70/103 (67%), Gaps = 7/103 (6%)
 Frame = +3

Query: 27  IEMGLSHYPSAAEGMLPVLVMNTVISVAIIKNMVRWVLQVMGC---AENTSDFEANTSIE 197
           ++MGLS++ S AEG+LPVLVMNTV+SVA++KNMVR VLQVMG    + N  +  +N    
Sbjct: 467 LKMGLSNFHSPAEGVLPVLVMNTVMSVALLKNMVRSVLQVMGANGSSPNLEEDPSNEEYS 526

Query: 198 GCAESLRKRRISSTLFKSLCNNGSRIG----ARSASGDQGSCS 314
             +E+ ++RR+S T FKSL ++ S +G    A SA   + +CS
Sbjct: 527 PMSENAKERRVSVTQFKSLXHSRSSVGRSENACSAGRSENACS 569


>ref|XP_003631250.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like [Vitis vinifera]
           gi|296081356|emb|CBI16789.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 46/100 (46%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
 Frame = +3

Query: 33  MGLSHYPSAAEGMLPVLVMNTVISVAIIKNMVRWVLQVMGC---AENTSDFEANTSIEGC 203
           MGLS++ S AEG+LPVLVMNTV+SVA++KNMVR VLQVMG    + N  +  +N      
Sbjct: 1   MGLSNFHSPAEGVLPVLVMNTVMSVALLKNMVRSVLQVMGANGSSPNLEEDPSNEEYSPM 60

Query: 204 AESLRKRRISSTLFKSLCNNGSRIGARSASGDQGSCSHWC 323
           +E+ ++RR+S T FKSL            S   G+ + WC
Sbjct: 61  SENAKERRVSVTQFKSL------------SHSSGTGTGWC 88


>ref|XP_003601903.1| RING-H2 finger protein [Medicago truncatula]
           gi|355490951|gb|AES72154.1| RING-H2 finger protein
           [Medicago truncatula]
          Length = 151

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/96 (43%), Positives = 61/96 (63%), Gaps = 9/96 (9%)
 Frame = +3

Query: 33  MGLSHYPSAAEGMLPVLVMNTVISVAIIKNMVRWVLQVMGCAENTSDFEANTSIEGCAE- 209
           MGLS++P AAEG++PV+VMNTV+S+ ++KNM R +LQV+GC   T+   +   +E   E 
Sbjct: 1   MGLSNFPYAAEGVVPVIVMNTVLSMVLLKNMFRSMLQVVGCTSTTNSSYSPNIMEELEEE 60

Query: 210 --------SLRKRRISSTLFKSLCNNGSRIGARSAS 293
                   + R+RR+S T +K LC N S I   S+S
Sbjct: 61  QVYSQEISNSRERRVSITQYKFLCYNRSNIARSSSS 96


>ref|NP_001117565.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|332196588|gb|AEE34709.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 133

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/81 (49%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
 Frame = +3

Query: 33  MGLSHYPSAAEGMLPVLVMNTVISVAIIKNMVRWVLQVMGCAENTSDFEANTSIEGCAES 212
           MG+SHYP+A+EG++P+LVMNTV+SV+++KNMVR V+ ++  +  T++       +   +S
Sbjct: 1   MGISHYPTASEGVMPMLVMNTVVSVSLVKNMVRSVVNMV--SSETNEARNKEDDQDHEDS 58

Query: 213 LRKRRISSTLFKSLC-NNGSR 272
            R+RRIS T F+SLC N GSR
Sbjct: 59  KRRRRISITHFESLCENRGSR 79


>ref|XP_002314594.1| predicted protein [Populus trichocarpa] gi|222863634|gb|EEF00765.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 48/88 (54%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
 Frame = +3

Query: 33  MGLSHYPSAAEGMLPVLVMNTVISVAIIKNMVRWVLQ-VMGCAENTSDFEANTSIEGCAE 209
           MGLS +P AAEG+LPVLVMNTV+SVA++K+MVR VLQ V+G      D+E     E   E
Sbjct: 1   MGLSSFPGAAEGVLPVLVMNTVLSVALLKSMVRSVLQLVVGANWTPPDYEEEPD-EYRRE 59

Query: 210 SLRKRRISSTLFKSLCNNGSRIGARSAS 293
           + R+RRIS T FKSL  N    GAR+++
Sbjct: 60  NARERRISITQFKSLNQNDG--GARNSA 85