BLASTX nr result
ID: Coptis24_contig00004103
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00004103
(846 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002299053.1| predicted protein [Populus trichocarpa] gi|2... 216 3e-58
emb|CBI39794.3| unnamed protein product [Vitis vinifera] 206 4e-54
ref|XP_002267826.1| PREDICTED: probable peptidyl-prolyl cis-tran... 206 4e-54
ref|XP_004167068.1| PREDICTED: peptidyl-prolyl cis-trans isomera... 211 1e-53
ref|XP_002512238.1| fkbp-type peptidyl-prolyl cis-trans isomeras... 204 7e-52
>ref|XP_002299053.1| predicted protein [Populus trichocarpa] gi|222846311|gb|EEE83858.1|
predicted protein [Populus trichocarpa]
Length = 180
Score = 216 bits (549), Expect(2) = 3e-58
Identities = 105/126 (83%), Positives = 117/126 (92%)
Frame = -3
Query: 643 TLKLPSGVRIEEIVQGEGPEAQEGNFVEVNYVCRRYNGYFVHSTVDQFSGESTPVVLPLF 464
TLKL SGVR +EI++GEGPEAQEG+ VEVNYVCRR NGYFVHSTVDQFSGES+PV+LPL
Sbjct: 54 TLKLASGVRFQEIIEGEGPEAQEGDTVEVNYVCRRSNGYFVHSTVDQFSGESSPVILPLD 113
Query: 463 DKQIIQGLKEVLIGMRVGGKRRALIPPSVGYVSENLQPIPEEFGPRRSLMSHVNESLIFE 284
+ QII+GLKEVLIGM+VGGKRRALIPPSVGYV+ENL+PIP+EFGPRRSL SH NE LIFE
Sbjct: 114 ENQIIKGLKEVLIGMKVGGKRRALIPPSVGYVNENLKPIPDEFGPRRSLFSHANEPLIFE 173
Query: 283 VQLLKV 266
VQLLKV
Sbjct: 174 VQLLKV 179
Score = 36.6 bits (83), Expect(2) = 3e-58
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = -2
Query: 746 EFLGFNSMLLHVGVALGAPKPMIETKEPQIIRT 648
+F GFN++LL + L AP P E KEP++IRT
Sbjct: 24 KFCGFNTLLLSINPVLAAPMP--EMKEPEVIRT 54
>emb|CBI39794.3| unnamed protein product [Vitis vinifera]
Length = 210
Score = 206 bits (523), Expect(2) = 4e-54
Identities = 97/126 (76%), Positives = 114/126 (90%)
Frame = -3
Query: 643 TLKLPSGVRIEEIVQGEGPEAQEGNFVEVNYVCRRYNGYFVHSTVDQFSGESTPVVLPLF 464
T KL +GVR +++V+G+GPEAQEG+ VEVNYVCRR NGYFVHSTVDQFSGES PVVLPL
Sbjct: 84 TQKLANGVRFQDVVEGDGPEAQEGDLVEVNYVCRRSNGYFVHSTVDQFSGESMPVVLPLD 143
Query: 463 DKQIIQGLKEVLIGMRVGGKRRALIPPSVGYVSENLQPIPEEFGPRRSLMSHVNESLIFE 284
+ QII+GLK+VL+GM+VGGKRRALIPPSVGY++ENL+PIP+EFGPRRSL SH E L+FE
Sbjct: 144 ENQIIKGLKDVLVGMKVGGKRRALIPPSVGYINENLKPIPDEFGPRRSLFSHAKEPLVFE 203
Query: 283 VQLLKV 266
VQLLKV
Sbjct: 204 VQLLKV 209
Score = 32.7 bits (73), Expect(2) = 4e-54
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -2
Query: 746 EFLGFNSMLLHVGVALGAPKPMIETKEPQIIRTQ 645
+F+G+N +L + L AP M+E EP++IRTQ
Sbjct: 54 QFMGYNHLLSYACPVLAAP--MLEMTEPEVIRTQ 85
>ref|XP_002267826.1| PREDICTED: probable peptidyl-prolyl cis-trans isomerase
C27F1.06c-like [Vitis vinifera]
Length = 197
Score = 206 bits (523), Expect(2) = 4e-54
Identities = 97/126 (76%), Positives = 114/126 (90%)
Frame = -3
Query: 643 TLKLPSGVRIEEIVQGEGPEAQEGNFVEVNYVCRRYNGYFVHSTVDQFSGESTPVVLPLF 464
T KL +GVR +++V+G+GPEAQEG+ VEVNYVCRR NGYFVHSTVDQFSGES PVVLPL
Sbjct: 71 TQKLANGVRFQDVVEGDGPEAQEGDLVEVNYVCRRSNGYFVHSTVDQFSGESMPVVLPLD 130
Query: 463 DKQIIQGLKEVLIGMRVGGKRRALIPPSVGYVSENLQPIPEEFGPRRSLMSHVNESLIFE 284
+ QII+GLK+VL+GM+VGGKRRALIPPSVGY++ENL+PIP+EFGPRRSL SH E L+FE
Sbjct: 131 ENQIIKGLKDVLVGMKVGGKRRALIPPSVGYINENLKPIPDEFGPRRSLFSHAKEPLVFE 190
Query: 283 VQLLKV 266
VQLLKV
Sbjct: 191 VQLLKV 196
Score = 32.7 bits (73), Expect(2) = 4e-54
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -2
Query: 746 EFLGFNSMLLHVGVALGAPKPMIETKEPQIIRTQ 645
+F+G+N +L + L AP M+E EP++IRTQ
Sbjct: 41 QFMGYNHLLSYACPVLAAP--MLEMTEPEVIRTQ 72
>ref|XP_004167068.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-1,
chloroplastic-like [Cucumis sativus]
Length = 214
Score = 211 bits (536), Expect(2) = 1e-53
Identities = 102/126 (80%), Positives = 114/126 (90%)
Frame = -3
Query: 643 TLKLPSGVRIEEIVQGEGPEAQEGNFVEVNYVCRRYNGYFVHSTVDQFSGESTPVVLPLF 464
TLKL SGVRI+E+ +G+G EA EG+ VE NYVCRR NGYFVHSTVDQFSGESTPV+LPL
Sbjct: 88 TLKLDSGVRIQEVFEGDGAEAHEGDMVEFNYVCRRSNGYFVHSTVDQFSGESTPVILPLK 147
Query: 463 DKQIIQGLKEVLIGMRVGGKRRALIPPSVGYVSENLQPIPEEFGPRRSLMSHVNESLIFE 284
+ QII+GLKEVL+GMRVGGKRRALIPPSVGY++ENL PIPEEFGPRRSL+SH NE LIFE
Sbjct: 148 ENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEPLIFE 207
Query: 283 VQLLKV 266
VQLLKV
Sbjct: 208 VQLLKV 213
Score = 26.2 bits (56), Expect(2) = 1e-53
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = -2
Query: 746 EFLGFNSMLLHVGVALGAPKPMIETKEPQIIRTQDFEAA*R 624
+F+G +LL+ + AP M++ +EP I+RT ++ R
Sbjct: 58 QFIGLYPILLYAYPSFSAP--MMDMQEPDIVRTLKLDSGVR 96
>ref|XP_002512238.1| fkbp-type peptidyl-prolyl cis-trans isomerase 2, chloroplast,
putative [Ricinus communis] gi|223548199|gb|EEF49690.1|
fkbp-type peptidyl-prolyl cis-trans isomerase 2,
chloroplast, putative [Ricinus communis]
Length = 166
Score = 204 bits (519), Expect(2) = 7e-52
Identities = 98/126 (77%), Positives = 113/126 (89%)
Frame = -3
Query: 643 TLKLPSGVRIEEIVQGEGPEAQEGNFVEVNYVCRRYNGYFVHSTVDQFSGESTPVVLPLF 464
TLK +GVRI EIV G+G EA EG+ VEVNYVCRR NGYFVHSTVDQFSGES+PV+LPL
Sbjct: 40 TLKFDNGVRIREIVDGKGQEAHEGDVVEVNYVCRRSNGYFVHSTVDQFSGESSPVILPLD 99
Query: 463 DKQIIQGLKEVLIGMRVGGKRRALIPPSVGYVSENLQPIPEEFGPRRSLMSHVNESLIFE 284
+ +II+GLKEV+IGM+VGGKRRALIPPSVGY++ENLQP+P+EFGPRRSL+SH E LIFE
Sbjct: 100 ENRIIKGLKEVIIGMKVGGKRRALIPPSVGYINENLQPVPDEFGPRRSLLSHAKEPLIFE 159
Query: 283 VQLLKV 266
VQLLKV
Sbjct: 160 VQLLKV 165
Score = 26.6 bits (57), Expect(2) = 7e-52
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = -2
Query: 740 LGFNSMLLHVG--VALGAPKPMIETKEPQIIRTQDFE 636
+G N++LL + L AP P +E EP+IIRT F+
Sbjct: 10 IGLNTVLLCISNNPVLAAPMPGME--EPEIIRTLKFD 44