BLASTX nr result
ID: Coptis24_contig00004096
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004096 (304 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002307121.1| predicted protein [Populus trichocarpa] gi|2... 67 2e-09 ref|XP_002532041.1| receptor protein kinase, putative [Ricinus c... 65 6e-09 gb|EAY85011.1| hypothetical protein OsI_06370 [Oryza sativa Indi... 62 5e-08 gb|AAZ67586.1| 80A08_1 [Brassica rapa subsp. pekinensis] 61 8e-08 ref|NP_199705.2| LRR receptor-like serine/threonine-protein kina... 61 8e-08 >ref|XP_002307121.1| predicted protein [Populus trichocarpa] gi|222856570|gb|EEE94117.1| predicted protein [Populus trichocarpa] Length = 1053 Score = 66.6 bits (161), Expect = 2e-09 Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 4/104 (3%) Frame = -2 Query: 303 TFTISFFLRTVNLSQNYLTGELPSLGEFVGPDRSLP----LQILDVSCNNITGPLTKSIG 136 +F S L +NLS N +G +P G G LP ++ LDVS N+++GPL IG Sbjct: 430 SFFTSLTLTNLNLSGNQFSGPIPVQGSGAGELLVLPSYPLMESLDVSQNSLSGPLPSGIG 489 Query: 135 YYQSLRTXXXXXXXXXGKLPSELNMLTHLETLDLTKNEFSGTIP 4 + +L++ G+LP EL+ LT+L+ LDL+ N F G IP Sbjct: 490 NFANLKSLNLSHNNLTGQLPIELSKLTYLQYLDLSANNFQGKIP 533 >ref|XP_002532041.1| receptor protein kinase, putative [Ricinus communis] gi|223528284|gb|EEF30331.1| receptor protein kinase, putative [Ricinus communis] Length = 1068 Score = 65.1 bits (157), Expect = 6e-09 Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 4/103 (3%) Frame = -2 Query: 300 FTISFFLRTVNLSQNYLTGELPSLGEFVGPDRSLP----LQILDVSCNNITGPLTKSIGY 133 F S L +NLS+N TG +P G VG LP + LD+S N+++G L IG Sbjct: 443 FFTSMALTNLNLSRNQFTGPIPLQGSHVGELLVLPSYPKIDSLDLSHNSLSGGLVSDIGN 502 Query: 132 YQSLRTXXXXXXXXXGKLPSELNMLTHLETLDLTKNEFSGTIP 4 SL+ G+LP EL+ LT+L+ LDL+ N+F G IP Sbjct: 503 MASLKLLNLSNNDLSGELPIELSKLTYLQYLDLSGNKFKGKIP 545 >gb|EAY85011.1| hypothetical protein OsI_06370 [Oryza sativa Indica Group] Length = 1151 Score = 62.0 bits (149), Expect = 5e-08 Identities = 41/100 (41%), Positives = 54/100 (54%), Gaps = 1/100 (1%) Frame = -2 Query: 300 FTISFFLRTVNLSQNYLTGELPS-LGEFVGPDRSLPLQILDVSCNNITGPLTKSIGYYQS 124 F+IS +VNL N+LTG LPS +G L +LD+S N I+G + SIG QS Sbjct: 612 FSISTLSASVNLEHNFLTGPLPSEVGNLTN------LALLDLSKNRISGEIPSSIGECQS 665 Query: 123 LRTXXXXXXXXXGKLPSELNMLTHLETLDLTKNEFSGTIP 4 L+ GK+P L+ L L LDL+ N SG+IP Sbjct: 666 LQYLNTSGNLLQGKIPPSLDQLKGLLVLDLSHNNLSGSIP 705 >gb|AAZ67586.1| 80A08_1 [Brassica rapa subsp. pekinensis] Length = 605 Score = 61.2 bits (147), Expect = 8e-08 Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 4/89 (4%) Frame = -2 Query: 258 NYLTGELPSLG----EFVGPDRSLPLQILDVSCNNITGPLTKSIGYYQSLRTXXXXXXXX 91 N L G +PS G E + +++LD+S N++TG L IG + +R Sbjct: 2 NSLEGPIPSRGSRASELMAISSDPQMELLDLSTNSLTGALPGDIGTMERIRVLNVANNKL 61 Query: 90 XGKLPSELNMLTHLETLDLTKNEFSGTIP 4 G+LPSELN LT LE LDL+ N+F G IP Sbjct: 62 SGELPSELNKLTSLEFLDLSNNDFKGQIP 90 >ref|NP_199705.2| LRR receptor-like serine/threonine-protein kinase RCH1 [Arabidopsis thaliana] gi|263505419|sp|C0LGV1.1|RCH1_ARATH RecName: Full=LRR receptor-like serine/threonine-protein kinase RCH1; AltName: Full=Protein ROOT CLAVATA-HOMOLOG1 1; Flags: Precursor gi|224589709|gb|ACN59386.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gi|332008362|gb|AED95745.1| LRR receptor-like serine/threonine-protein kinase RCH1 [Arabidopsis thaliana] Length = 1135 Score = 61.2 bits (147), Expect = 8e-08 Identities = 39/94 (41%), Positives = 52/94 (55%), Gaps = 1/94 (1%) Frame = -2 Query: 282 LRTVNLSQNYLTGELP-SLGEFVGPDRSLPLQILDVSCNNITGPLTKSIGYYQSLRTXXX 106 L+ +NLS N L G LP SL LQ+LDVS N++TG + S+G+ SL Sbjct: 517 LQMLNLSNNTLQGYLPLSLSSLT------KLQVLDVSSNDLTGKIPDSLGHLISLNRLIL 570 Query: 105 XXXXXXGKLPSELNMLTHLETLDLTKNEFSGTIP 4 G++PS L T+L+ LDL+ N SGTIP Sbjct: 571 SKNSFNGEIPSSLGHCTNLQLLDLSSNNISGTIP 604