BLASTX nr result

ID: Coptis24_contig00004094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004094
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513686.1| conserved hypothetical protein [Ricinus comm...    75   4e-12
ref|XP_002298135.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_003592261.1| hypothetical protein MTR_1g100890 [Medicago ...    71   8e-11
ref|XP_003539459.1| PREDICTED: uncharacterized protein LOC100814...    71   1e-10
ref|XP_003634102.1| PREDICTED: uncharacterized protein LOC100853...    70   2e-10

>ref|XP_002513686.1| conserved hypothetical protein [Ricinus communis]
           gi|223547594|gb|EEF49089.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 62

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/38 (89%), Positives = 35/38 (92%)
 Frame = +3

Query: 78  SPCDVEALKKCLEENKGDRSKCQSQVEAFKDSCSLKKP 191
           SPCDVEALKKCLEENKGD  KCQSQ+EAFK SCSLKKP
Sbjct: 15  SPCDVEALKKCLEENKGDYVKCQSQIEAFKSSCSLKKP 52


>ref|XP_002298135.1| predicted protein [Populus trichocarpa] gi|222845393|gb|EEE82940.1|
           predicted protein [Populus trichocarpa]
          Length = 63

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/49 (73%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
 Frame = +3

Query: 78  SPCDVEALKKCLEENKGDRSKCQSQVEAFKDSCSLKK-PKSDSSSEPTT 221
           S CDVEALKKCLEENKGD  KCQSQ+EAFK SCSL K P S +S E  T
Sbjct: 12  SACDVEALKKCLEENKGDYVKCQSQIEAFKSSCSLNKHPPSTTSMESQT 60


>ref|XP_003592261.1| hypothetical protein MTR_1g100890 [Medicago truncatula]
           gi|355481309|gb|AES62512.1| hypothetical protein
           MTR_1g100890 [Medicago truncatula]
          Length = 68

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/46 (69%), Positives = 36/46 (78%)
 Frame = +3

Query: 78  SPCDVEALKKCLEENKGDRSKCQSQVEAFKDSCSLKKPKSDSSSEP 215
           S CDV+ALKKCLEENKG+  KCQSQ+EAFK SCS+KKP     S P
Sbjct: 16  SACDVDALKKCLEENKGNYVKCQSQIEAFKSSCSVKKPNPSLDSSP 61


>ref|XP_003539459.1| PREDICTED: uncharacterized protein LOC100814505 [Glycine max]
          Length = 63

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/44 (75%), Positives = 34/44 (77%)
 Frame = +3

Query: 78  SPCDVEALKKCLEENKGDRSKCQSQVEAFKDSCSLKKPKSDSSS 209
           S CDVEALKKCLEENKGD  KC SQ+EAFK SCSLKKP     S
Sbjct: 17  SACDVEALKKCLEENKGDYVKCHSQIEAFKSSCSLKKPNPSLDS 60


>ref|XP_003634102.1| PREDICTED: uncharacterized protein LOC100853762 [Vitis vinifera]
          Length = 52

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/45 (75%), Positives = 37/45 (82%)
 Frame = +3

Query: 78  SPCDVEALKKCLEENKGDRSKCQSQVEAFKDSCSLKKPKSDSSSE 212
           SPCDVEALKKCLEE KGD  KCQS +EAF+ SCSLK  KSDSS +
Sbjct: 5   SPCDVEALKKCLEETKGDYVKCQSHIEAFRSSCSLK--KSDSSPQ 47


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