BLASTX nr result

ID: Coptis24_contig00004090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004090
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15693.3| unnamed protein product [Vitis vinifera]              104   8e-21
ref|XP_002284075.1| PREDICTED: uncharacterized protein LOC100249...   104   8e-21
ref|XP_002511150.1| metal ion binding protein, putative [Ricinus...   102   4e-20
ref|NP_001239647.1| uncharacterized protein LOC100808454 [Glycin...    99   3e-19
ref|NP_001078790.1| farnesylated protein 3 [Arabidopsis thaliana...    97   1e-18

>emb|CBI15693.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score =  104 bits (259), Expect = 8e-21
 Identities = 62/109 (56%), Positives = 77/109 (70%), Gaps = 2/109 (1%)
 Frame = -3

Query: 362 DERQVETVHSSLEPTVEVENKTEEDKLDSIKPEEQKEK--LITVVLKFYMHCEDCAQKIL 189
           + RQVE +    +P  E E K EE   ++ KPEE+KE+  +ITVVLK +MHCE CAQ+I 
Sbjct: 103 NHRQVELLSPIPKPPAEDEKKPEEK--EAPKPEEKKEEPQVITVVLKVHMHCEACAQEIQ 160

Query: 188 KCLKRVEGVYSAEADLNSSQVTVKGVALSPLKLVEYVYKKTKKHAEIVK 42
           K + R++GV  AE DL +SQVTVKGV   P KLVEYVYK+T KHA IVK
Sbjct: 161 KRIGRMKGVEFAEPDLKASQVTVKGV-FDPPKLVEYVYKRTGKHAVIVK 208



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 18/108 (16%)
 Frame = -3

Query: 314 EVENKTEEDKLDSIKPEEQKEKLIT------------------VVLKFYMHCEDCAQKIL 189
           E E K EE K++  K EE+K++                     +VL+ YMHCE CA+K+ 
Sbjct: 3   EEEKKPEEKKMEGKKAEEEKKEEKAAPEEGKAAKAEPPPPPPEIVLRVYMHCEGCARKVR 62

Query: 188 KCLKRVEGVYSAEADLNSSQVTVKGVALSPLKLVEYVYKKTKKHAEIV 45
           +CLK  +GV     D  S +V VKG    PLK++E V +K  +  E++
Sbjct: 63  RCLKGFDGVEDVITDCKSQKVVVKGEKADPLKVLERVQRKNHRQVELL 110


>ref|XP_002284075.1| PREDICTED: uncharacterized protein LOC100249014 [Vitis vinifera]
          Length = 311

 Score =  104 bits (259), Expect = 8e-21
 Identities = 62/109 (56%), Positives = 77/109 (70%), Gaps = 2/109 (1%)
 Frame = -3

Query: 362 DERQVETVHSSLEPTVEVENKTEEDKLDSIKPEEQKEK--LITVVLKFYMHCEDCAQKIL 189
           + RQVE +    +P  E E K EE   ++ KPEE+KE+  +ITVVLK +MHCE CAQ+I 
Sbjct: 103 NHRQVELLSPIPKPPAEDEKKPEEK--EAPKPEEKKEEPQVITVVLKVHMHCEACAQEIQ 160

Query: 188 KCLKRVEGVYSAEADLNSSQVTVKGVALSPLKLVEYVYKKTKKHAEIVK 42
           K + R++GV  AE DL +SQVTVKGV   P KLVEYVYK+T KHA IVK
Sbjct: 161 KRIGRMKGVEFAEPDLKASQVTVKGV-FDPPKLVEYVYKRTGKHAVIVK 208



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 18/108 (16%)
 Frame = -3

Query: 314 EVENKTEEDKLDSIKPEEQKEKLIT------------------VVLKFYMHCEDCAQKIL 189
           E E K EE K++  K EE+K++                     +VL+ YMHCE CA+K+ 
Sbjct: 3   EEEKKPEEKKMEGKKAEEEKKEEKAAPEEGKAAKAEPPPPPPEIVLRVYMHCEGCARKVR 62

Query: 188 KCLKRVEGVYSAEADLNSSQVTVKGVALSPLKLVEYVYKKTKKHAEIV 45
           +CLK  +GV     D  S +V VKG    PLK++E V +K  +  E++
Sbjct: 63  RCLKGFDGVEDVITDCKSQKVVVKGEKADPLKVLERVQRKNHRQVELL 110


>ref|XP_002511150.1| metal ion binding protein, putative [Ricinus communis]
           gi|223550265|gb|EEF51752.1| metal ion binding protein,
           putative [Ricinus communis]
          Length = 349

 Score =  102 bits (253), Expect = 4e-20
 Identities = 60/107 (56%), Positives = 75/107 (70%), Gaps = 2/107 (1%)
 Frame = -3

Query: 356 RQVETVHSSLEPTVEVENKTEEDKLDSIKPEEQKEK--LITVVLKFYMHCEDCAQKILKC 183
           RQVE +    +P  E E K  E+K +  KPEE+KE+  +I VVLK YMHCE CA +I K 
Sbjct: 134 RQVELISPIPKPPSEEEKKAAEEK-EKPKPEEKKEEPPVIIVVLKVYMHCEACAMEIKKR 192

Query: 182 LKRVEGVYSAEADLNSSQVTVKGVALSPLKLVEYVYKKTKKHAEIVK 42
           ++R++GV SA+ DL SS+VTVKGV   P KLVEYV K+T KHA IVK
Sbjct: 193 IQRMKGVESADPDLKSSEVTVKGV-FDPQKLVEYVRKRTGKHALIVK 238



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
 Frame = -3

Query: 293 EDKLDSIKPEEQKEKLIT-------VVLKFYMHCEDCAQKILKCLKRVEGVYSAEADLNS 135
           E+K +  KP+E KE           +++K YMHCE CA+K+ +CLK  +GV     D  S
Sbjct: 50  EEKKEDKKPDEAKESKDESPPPPQEIIMKVYMHCEGCARKVRRCLKGFDGVEDVITDCKS 109

Query: 134 SQVTVKGVALSPLKLVEYVYKKTKKHAEIV 45
           S+V VKG    PL+++  V +K+ +  E++
Sbjct: 110 SKVVVKGEKADPLQVLARVQRKSHRQVELI 139


>ref|NP_001239647.1| uncharacterized protein LOC100808454 [Glycine max]
           gi|255636041|gb|ACU18365.1| unknown [Glycine max]
          Length = 308

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 56/107 (52%), Positives = 78/107 (72%), Gaps = 2/107 (1%)
 Frame = -3

Query: 356 RQVETVHSSLEPTVEVENKTEEDKLDSIKPEEQKE--KLITVVLKFYMHCEDCAQKILKC 183
           R+VE +    +P  E E K +E++ +  KPEE+KE  ++ITVVLK +MHCE CAQ+I + 
Sbjct: 110 RKVELLSPIPKPPTEEEKKPQEEQ-EKPKPEEKKEEPRVITVVLKVHMHCEACAQEIKRR 168

Query: 182 LKRVEGVYSAEADLNSSQVTVKGVALSPLKLVEYVYKKTKKHAEIVK 42
           +++++GV SAEADL  S+V+VKGV     KLVE+VYK+T KHA IVK
Sbjct: 169 IEKMKGVESAEADLKKSEVSVKGV-FETAKLVEHVYKRTGKHAVIVK 214



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
 Frame = -3

Query: 359 ERQVETVHSSLEPTVEVENKTEEDKLDSIKPEEQKEKLIT--VVLKFYMHCEDCAQKILK 186
           E   E    + EP  E E K E    +S   +E KEK+    +VLK +MHCE CA+K+ +
Sbjct: 9   EESKEENKKAEEPKKEEEKKEERKTEESKDDKESKEKVAPSEIVLKVFMHCEGCARKVRR 68

Query: 185 CLKRVEGVYSAEADLNSSQVTVKGVALSPLKLVEYVYKKTKKHAEIV 45
            LK   GV     D  S +V VKG    PLK++E + KK+ +  E++
Sbjct: 69  SLKGFPGVEDILTDCKSHKVVVKGEKADPLKVLERLQKKSHRKVELL 115


>ref|NP_001078790.1| farnesylated protein 3 [Arabidopsis thaliana]
           gi|9758294|dbj|BAB08818.1| unnamed protein product
           [Arabidopsis thaliana] gi|332010381|gb|AED97764.1|
           farnesylated protein 3 [Arabidopsis thaliana]
          Length = 340

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 55/105 (52%), Positives = 70/105 (66%)
 Frame = -3

Query: 356 RQVETVHSSLEPTVEVENKTEEDKLDSIKPEEQKEKLITVVLKFYMHCEDCAQKILKCLK 177
           RQV+ +     P    E K EEDK    + + +   ++TVVLK +MHCE CA +I K + 
Sbjct: 119 RQVQLLSPIPPPPPPPEKKAEEDKPIVEEKKVEPPVVVTVVLKVHMHCEACATEIKKRIM 178

Query: 176 RVEGVYSAEADLNSSQVTVKGVALSPLKLVEYVYKKTKKHAEIVK 42
           R++GV SAE+DL SSQVTVKGV   P KLVEYVYK+T KHA I+K
Sbjct: 179 RMKGVESAESDLKSSQVTVKGV-FEPQKLVEYVYKRTGKHAAIMK 222



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/65 (44%), Positives = 41/65 (63%)
 Frame = -3

Query: 239 VVLKFYMHCEDCAQKILKCLKRVEGVYSAEADLNSSQVTVKGVALSPLKLVEYVYKKTKK 60
           VVLK YMHCE CA+K+ +CLK  EGV     D  + +V VKG    PLK++  V +KT +
Sbjct: 60  VVLKVYMHCEGCARKVRRCLKGFEGVEDVMTDCKTGKVVVKGEKADPLKVLARVQRKTHR 119

Query: 59  HAEIV 45
             +++
Sbjct: 120 QVQLL 124


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