BLASTX nr result

ID: Coptis24_contig00004084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004084
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519948.1| conserved hypothetical protein [Ricinus comm...    89   9e-16
ref|XP_002329190.1| predicted protein [Populus trichocarpa] gi|2...    87   5e-15
ref|XP_002264424.1| PREDICTED: uncharacterized protein LOC100251...    80   6e-13
ref|XP_003549148.1| PREDICTED: uncharacterized protein LOC100804...    69   2e-09
ref|XP_003534049.1| PREDICTED: uncharacterized protein LOC100807...    68   2e-09

>ref|XP_002519948.1| conserved hypothetical protein [Ricinus communis]
           gi|223540994|gb|EEF42552.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 140

 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 37/54 (68%), Positives = 48/54 (88%)
 Frame = -2

Query: 510 AHDESRRYTNIGKLFHGPGYLPSQDELGVLIDELVVNTKKVIRATSREVEKWRR 349
           AHD+ RRY+N+ K FHGPG LP+QDE+  LIDELV+NTKK+++ATSRE+EKWR+
Sbjct: 87  AHDDKRRYSNVAKFFHGPGNLPTQDEMAGLIDELVINTKKLVQATSREIEKWRK 140


>ref|XP_002329190.1| predicted protein [Populus trichocarpa] gi|222870971|gb|EEF08102.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 38/54 (70%), Positives = 47/54 (87%)
 Frame = -2

Query: 510 AHDESRRYTNIGKLFHGPGYLPSQDELGVLIDELVVNTKKVIRATSREVEKWRR 349
           AHDE RRY+N+GK F GP  LP+ DE+G LIDELV+NTKK+++ATSRE+EKWRR
Sbjct: 88  AHDEKRRYSNVGKHFRGPVNLPTHDEVGSLIDELVINTKKLVKATSREIEKWRR 141


>ref|XP_002264424.1| PREDICTED: uncharacterized protein LOC100251600 [Vitis vinifera]
           gi|297734734|emb|CBI16968.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 37/54 (68%), Positives = 47/54 (87%)
 Frame = -2

Query: 510 AHDESRRYTNIGKLFHGPGYLPSQDELGVLIDELVVNTKKVIRATSREVEKWRR 349
           AHDE RRY+N+GKLF G   LP+QD++GVL+DE+V NTKK+I+AT RE+EKWRR
Sbjct: 86  AHDEYRRYSNVGKLFKGRD-LPTQDDVGVLVDEVVRNTKKLIKATEREIEKWRR 138


>ref|XP_003549148.1| PREDICTED: uncharacterized protein LOC100804802 [Glycine max]
          Length = 156

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 28/54 (51%), Positives = 43/54 (79%)
 Frame = -2

Query: 510 AHDESRRYTNIGKLFHGPGYLPSQDELGVLIDELVVNTKKVIRATSREVEKWRR 349
           A DE++RY+N+G  F G   + S+D++  L+D+LV+NTKK I+ATS+E++KWRR
Sbjct: 103 AQDENKRYSNVGNPFRGSRSIISEDDITALVDDLVINTKKFIKATSKEIDKWRR 156


>ref|XP_003534049.1| PREDICTED: uncharacterized protein LOC100807124 [Glycine max]
          Length = 133

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 27/54 (50%), Positives = 44/54 (81%)
 Frame = -2

Query: 510 AHDESRRYTNIGKLFHGPGYLPSQDELGVLIDELVVNTKKVIRATSREVEKWRR 349
           A D+++RY+N+G  F G   + S+D++  L+D+LV+NTKK+I+ATS+E++KWRR
Sbjct: 80  AQDDNKRYSNVGNPFRGSRSIISEDDITALVDDLVINTKKLIKATSKEIDKWRR 133


Top