BLASTX nr result
ID: Coptis24_contig00004082
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00004082
(876 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera] 136 5e-57
ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258... 135 1e-56
ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247... 120 2e-53
emb|CBI40561.3| unnamed protein product [Vitis vinifera] 135 8e-51
ref|XP_002516668.1| transcription factor, putative [Ricinus comm... 118 2e-42
>emb|CAN64660.1| hypothetical protein VITISV_009615 [Vitis vinifera]
Length = 1160
Score = 136 bits (343), Expect(2) = 5e-57
Identities = 61/91 (67%), Positives = 76/91 (83%)
Frame = -1
Query: 273 NVFKNPGVRRAAFRSNSKDNYLYCPNVVDLRNDEIEHF*MHWMRGEPIIVRHVLEKTSGV 94
N +N +R+AAFR + DN+LYCPN V++ +DEIEHF HWMRGEP+IVR+VL+KTSG+
Sbjct: 477 NSEQNSEMRKAAFRKHGHDNFLYCPNAVNITDDEIEHFQRHWMRGEPVIVRNVLDKTSGL 536
Query: 93 TWEPMVKWRAFRETGSKGNLKEETRSVKAID 1
+WEPMV WRAFRETG+K KEETR+VKAID
Sbjct: 537 SWEPMVMWRAFRETGAKTKFKEETRTVKAID 567
Score = 111 bits (278), Expect(2) = 5e-57
Identities = 71/192 (36%), Positives = 85/192 (44%), Gaps = 2/192 (1%)
Frame = -2
Query: 845 CDNCNTSVFNFHRSWPNPDCPYDXXXXXXXXXXXXRQRGGNEAYSSQRQYVERARSQDTD 666
CDNCNTS+ +FHRS PNPDC YD RQ GG+EA +S +Q+VERA Q D
Sbjct: 312 CDNCNTSIVDFHRSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERAHGQVAD 371
Query: 665 GKGATTASRKRSGW*G--AQSAEGSLTDVVGRFPDWRTNIDCSIRCTPKEWWLWFQXXXX 492
GK T RKR+G +A+ S DV +FPDWR D SI C PKE
Sbjct: 372 GKSKATTKRKRNGRVSEVELAADDSKADVSNQFPDWRATGDGSIPCPPKE---------- 421
Query: 491 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILKANWASNLRNSAEKLTSNSQFPNVD 312
KANW L S+E L + Q P+ +
Sbjct: 422 --------------------RGGCGTAILELRRNFKANWVMKLIQSSEDLICHYQLPDHN 461
Query: 311 TPIGCSSCLPFV 276
GCS C P V
Sbjct: 462 FSQGCSLCWPNV 473
>ref|XP_002263925.2| PREDICTED: uncharacterized protein LOC100258626 [Vitis vinifera]
Length = 1035
Score = 135 bits (339), Expect(2) = 1e-56
Identities = 60/91 (65%), Positives = 76/91 (83%)
Frame = -1
Query: 273 NVFKNPGVRRAAFRSNSKDNYLYCPNVVDLRNDEIEHF*MHWMRGEPIIVRHVLEKTSGV 94
N +N +R+AAFR + DN+L+CPN V++ +DEIEHF HWMRGEP+IVR+VL+KTSG+
Sbjct: 477 NSEQNSEMRKAAFRKHGHDNFLFCPNAVNITDDEIEHFQRHWMRGEPVIVRNVLDKTSGL 536
Query: 93 TWEPMVKWRAFRETGSKGNLKEETRSVKAID 1
+WEPMV WRAFRETG+K KEETR+VKAID
Sbjct: 537 SWEPMVMWRAFRETGAKTKFKEETRTVKAID 567
Score = 111 bits (278), Expect(2) = 1e-56
Identities = 71/192 (36%), Positives = 85/192 (44%), Gaps = 2/192 (1%)
Frame = -2
Query: 845 CDNCNTSVFNFHRSWPNPDCPYDXXXXXXXXXXXXRQRGGNEAYSSQRQYVERARSQDTD 666
CDNCNTS+ +FHRS PNPDC YD RQ GG+EA +S +Q+VERA Q D
Sbjct: 312 CDNCNTSIVDFHRSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERAHGQVAD 371
Query: 665 GKGATTASRKRSGW*G--AQSAEGSLTDVVGRFPDWRTNIDCSIRCTPKEWWLWFQXXXX 492
GK T RKR+G +A+ S DV +FPDWR D SI C PKE
Sbjct: 372 GKSKATTKRKRNGRVSEVELAADDSKADVSNQFPDWRATGDGSIPCPPKE---------- 421
Query: 491 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILKANWASNLRNSAEKLTSNSQFPNVD 312
KANW L S+E L + Q P+ +
Sbjct: 422 --------------------RGGCGTAILELRRNFKANWVMKLIQSSEDLICHYQLPDHN 461
Query: 311 TPIGCSSCLPFV 276
GCS C P V
Sbjct: 462 FSQGCSLCWPNV 473
>ref|XP_002272717.2| PREDICTED: uncharacterized protein LOC100247074 [Vitis vinifera]
Length = 1876
Score = 120 bits (302), Expect(2) = 2e-53
Identities = 60/92 (65%), Positives = 73/92 (79%)
Frame = -1
Query: 276 GNVFKNPGVRRAAFRSNSKDNYLYCPNVVDLRNDEIEHF*MHWMRGEPIIVRHVLEKTSG 97
G+ K+ VRRAAFR NS D++LYCPN L ++EIEHF MHWMRGEP+IVR+VLEKTSG
Sbjct: 1367 GSGEKHCEVRRAAFRENSHDDFLYCPNSACLGDNEIEHFQMHWMRGEPVIVRNVLEKTSG 1426
Query: 96 VTWEPMVKWRAFRETGSKGNLKEETRSVKAID 1
++W+PMV WRAFR G+ LKE+ SVKAID
Sbjct: 1427 LSWDPMVMWRAFR--GATKVLKEDALSVKAID 1456
Score = 115 bits (287), Expect(2) = 2e-53
Identities = 71/190 (37%), Positives = 81/190 (42%), Gaps = 2/190 (1%)
Frame = -2
Query: 845 CDNCNTSVFNFHRSWPNPDCPYDXXXXXXXXXXXXRQRGGNEAYSSQRQYVERARSQDTD 666
CDNCNTS+ N HRS PNPDC YD Q GGNEA SS +Q+VER Q T+
Sbjct: 1204 CDNCNTSIVNLHRSCPNPDCSYDLCLTCCRELRKGLQPGGNEAESSHQQFVERVNGQGTE 1263
Query: 665 GKGATTASRKRSGW--*GAQSAEGSLTDVVGRFPDWRTNIDCSIRCTPKEWWLWFQXXXX 492
KG A +R GW GA D FPDWR N+D SI C PK
Sbjct: 1264 VKGRIPAHDERYGWESDGAHPTNNYAADTCD-FPDWRVNMDGSIPCPPK----------- 1311
Query: 491 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILKANWASNLRNSAEKLTSNSQFPNVD 312
I + NW +L SAE LT N P++D
Sbjct: 1312 -------------------ARGGCGTETLELRRIFEPNWVDHLIKSAEDLTMNFGSPDID 1352
Query: 311 TPIGCSSCLP 282
GCS CLP
Sbjct: 1353 FSQGCSLCLP 1362
>emb|CBI40561.3| unnamed protein product [Vitis vinifera]
Length = 897
Score = 135 bits (339), Expect(2) = 8e-51
Identities = 60/91 (65%), Positives = 76/91 (83%)
Frame = -1
Query: 273 NVFKNPGVRRAAFRSNSKDNYLYCPNVVDLRNDEIEHF*MHWMRGEPIIVRHVLEKTSGV 94
N +N +R+AAFR + DN+L+CPN V++ +DEIEHF HWMRGEP+IVR+VL+KTSG+
Sbjct: 431 NSEQNSEMRKAAFRKHGHDNFLFCPNAVNITDDEIEHFQRHWMRGEPVIVRNVLDKTSGL 490
Query: 93 TWEPMVKWRAFRETGSKGNLKEETRSVKAID 1
+WEPMV WRAFRETG+K KEETR+VKAID
Sbjct: 491 SWEPMVMWRAFRETGAKTKFKEETRTVKAID 521
Score = 92.4 bits (228), Expect(2) = 8e-51
Identities = 63/190 (33%), Positives = 76/190 (40%)
Frame = -2
Query: 845 CDNCNTSVFNFHRSWPNPDCPYDXXXXXXXXXXXXRQRGGNEAYSSQRQYVERARSQDTD 666
CDNCNTS+ +FHRS PNPDC YD RQ GG+EA +S +Q+VERA
Sbjct: 288 CDNCNTSIVDFHRSCPNPDCSYDLCLICCRELREGRQPGGSEAETSHQQFVERAH----- 342
Query: 665 GKGATTASRKRSGW*GAQSAEGSLTDVVGRFPDWRTNIDCSIRCTPKEWWLWFQXXXXXX 486
G +A+ S DV +FPDWR D SI C PKE
Sbjct: 343 ---------------GQLAADDSKADVSNQFPDWRATGDGSIPCPPKE------------ 375
Query: 485 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILKANWASNLRNSAEKLTSNSQFPNVDTP 306
KANW L S+E L + Q P+ +
Sbjct: 376 ------------------RGGCGTAILELRRNFKANWVMKLIQSSEDLICHYQLPDHNFS 417
Query: 305 IGCSSCLPFV 276
GCS C P V
Sbjct: 418 QGCSLCWPNV 427
>ref|XP_002516668.1| transcription factor, putative [Ricinus communis]
gi|223544163|gb|EEF45687.1| transcription factor,
putative [Ricinus communis]
Length = 939
Score = 118 bits (296), Expect(2) = 2e-42
Identities = 60/98 (61%), Positives = 75/98 (76%)
Frame = -1
Query: 294 FMSSFCGNVFKNPGVRRAAFRSNSKDNYLYCPNVVDLRNDEIEHF*MHWMRGEPIIVRHV 115
F S+ C + K+ VR+AA R S DN+LYCPN + L ++EIEHF MHWMRGEP+IVR+V
Sbjct: 451 FSSTDC--IMKDFEVRKAADREKSDDNFLYCPNALWLGDNEIEHFQMHWMRGEPVIVRNV 508
Query: 114 LEKTSGVTWEPMVKWRAFRETGSKGNLKEETRSVKAID 1
L+KTSG++WEPMV WRA R G+K LKEE + VKAID
Sbjct: 509 LDKTSGLSWEPMVMWRALR--GAKKILKEEAQRVKAID 544
Score = 81.3 bits (199), Expect(2) = 2e-42
Identities = 58/197 (29%), Positives = 75/197 (38%), Gaps = 8/197 (4%)
Frame = -2
Query: 845 CDNCNTSVFNFHRSWPNPDCPYDXXXXXXXXXXXXRQRGGNEAYSSQRQYVERARSQDTD 666
CDNCNTS+ NFHRS +P C YD Q GGN+A SS Q+VER QDT
Sbjct: 291 CDNCNTSIVNFHRSCSDPGCSYDLCLTCCSEIRKGIQSGGNDAESSLHQFVERVNGQDTY 350
Query: 665 GKGATTASRKRSGW*GAQSAEGSLTDVVGR--------FPDWRTNIDCSIRCTPKEWWLW 510
TA++KR E ++ +V + PDWR D I C PK
Sbjct: 351 LNDQITANQKRF------CCEMQVSHLVNKCDTESSNDSPDWRAETDGQISCPPK----- 399
Query: 509 FQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILKANWASNLRNSAEKLTSNS 330
+ +AN L + E+L N
Sbjct: 400 -------------------------ARGGCGTGMLVMRRVFEANMVKELIKNTEELIINY 434
Query: 329 QFPNVDTPIGCSSCLPF 279
+ P+ D+ GC C PF
Sbjct: 435 KPPDTDSFQGCYLCRPF 451