BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004079
         (1047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloro...   293   6e-77
ref|XP_002534570.1| conserved hypothetical protein [Ricinus comm...   228   2e-57
ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2...   227   4e-57
ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|2...   224   3e-56
ref|XP_004137734.1| PREDICTED: UPF0503 protein At3g09070, chloro...   204   4e-50

>ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Vitis
            vinifera]
          Length = 663

 Score =  293 bits (749), Expect = 6e-77
 Identities = 170/311 (54%), Positives = 204/311 (65%), Gaps = 4/311 (1%)
 Frame = -3

Query: 1045 RTLSRVPPPMVSLGEHVPISVPRFDNLIPVEEPRISVTEEATTTPGGSAQTRDYYXXXXX 866
            RT  R+PP MVS+ E  P+ V R DN IPVEEPR S   E  + PGGSAQTRDYY     
Sbjct: 359  RTFPRLPP-MVSVVEDAPVPVQRSDNQIPVEEPRNSSVNEDESIPGGSAQTRDYYSDSSS 417

Query: 865  XXXXXXXXXXXSNSIRKKAAAVVAELDETKLVSNAKVSPPVLDPFLGTKLLVGDKDLRNL 686
                        NSIRK AAAVVA+LDE+K VSNAKVSP  +D F G KL+  DKDLR+ 
Sbjct: 418  RRRKSLDRS---NSIRKTAAAVVADLDESKSVSNAKVSPATIDYFHGPKLIPADKDLRDS 474

Query: 685  KSSSVRDDCSESFESAFRDTASVTGGVLEXXXXXXXXXXXKAWNIWGLIYRRGGSKDEDE 506
             S+S+RDDCSE+FE AFRD ASVTG   E           KAWNIWG I+RR G+KDED+
Sbjct: 475  NSNSLRDDCSETFEMAFRDAASVTGNG-ERKGSKKSSRWSKAWNIWGFIHRRSGTKDEDD 533

Query: 505  DRYSR---VERSFSESWPELRREPLNGDAKGD-XXXXXXXXXXXXXXXSYNMSGSFNSSR 338
            DR+SR   VERS SESWPELR E  NGD +G                 S+ M GSF+S+R
Sbjct: 534  DRFSRVNGVERSLSESWPELRGE-RNGDVRGAFNRKVFRSNSSVSSRNSFTMGGSFSSTR 592

Query: 337  RNAAETXXXXXXXXXEYMLDRNRSGRYSSNDIDNGLLRFYLTPMRSGRRNGSGKSVPKSS 158
            +++AE+         E++L+RNRS RYS N+IDNGLLRFYLTP+RS RR GSGK+ P +S
Sbjct: 593  KSSAESNGHGKKRRDEFVLERNRSARYSPNNIDNGLLRFYLTPLRSSRRGGSGKTRPSNS 652

Query: 157  HTLANSALRMY 125
            H++A S LR+Y
Sbjct: 653  HSIARSVLRLY 663


>ref|XP_002534570.1| conserved hypothetical protein [Ricinus communis]
            gi|223525005|gb|EEF27813.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 676

 Score =  228 bits (581), Expect = 2e-57
 Identities = 148/315 (46%), Positives = 180/315 (57%), Gaps = 15/315 (4%)
 Frame = -3

Query: 1024 PPMVSLGEHVPISVP-RFDNLIPVEEPRISVTEEATTTPGGSAQTRDYYXXXXXXXXXXX 848
            P M+S+ E  P++V  R D  IPVEEPR S+ E+  T PGGSAQTRDYY           
Sbjct: 374  PTMLSVVEDAPVNVVLRSDTQIPVEEPRNSIHED-DTLPGGSAQTRDYYSDSSSRRRKSL 432

Query: 847  XXXXXSNSIRKKAAAVVAELDETK----LVSNAKVSPPVLDPFL-------GTKLLVGDK 701
                  NSIRK AAAVVAE+DE K    ++SN+KVSP      +       G KL++ D+
Sbjct: 433  DRS---NSIRKTAAAVVAEIDELKSAASVISNSKVSPATTTSTMTADYYIHGPKLVLPDR 489

Query: 700  DLRNLKSSSVRDDCSESFESAFRDTASVTGGVLEXXXXXXXXXXXKAWNIWGLIYRRGGS 521
            D  N  S+S+RDDCSE+FE  FRD A   G   E           KAWNIWG I+RR  +
Sbjct: 490  D-SNSNSNSLRDDCSETFEMGFRDNAVENG---ERKGAKKSRRWSKAWNIWGFIHRRSVN 545

Query: 520  KDEDEDRYSR---VERSFSESWPELRREPLNGDAKGDXXXXXXXXXXXXXXXSYNMSGSF 350
            KDE+EDRYSR   VERSFSESWPELR E  N                      +   GSF
Sbjct: 546  KDEEEDRYSRGNGVERSFSESWPELRGERNNNPK----ILRSNSSVSWRNSNGFGGGGSF 601

Query: 349  NSSRRNAAETXXXXXXXXXEYMLDRNRSGRYSSNDIDNGLLRFYLTPMRSGRRNGSGKSV 170
             S+R++  ET         E++L+RNRS RYS N+IDNGLLRFYLTPMR  RR G GKS 
Sbjct: 602  GSARKSNVETNGHGRKKKDEFVLERNRSARYSPNNIDNGLLRFYLTPMRGSRRGGWGKSK 661

Query: 169  PKSSHTLANSALRMY 125
               + ++A S LR+Y
Sbjct: 662  SSHAQSIARSVLRLY 676


>ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1|
            predicted protein [Populus trichocarpa]
          Length = 628

 Score =  227 bits (578), Expect = 4e-57
 Identities = 145/317 (45%), Positives = 184/317 (58%), Gaps = 10/317 (3%)
 Frame = -3

Query: 1045 RTLSRVPPPMVSLGEHVPISVP-RFDNLIPVEEP-RISVTE--EATTTPGGSAQTRDYYX 878
            RT  R+P  MVS+ E  P++V  R D  IPVEEP RIS+    E    PGGSAQTRDYY 
Sbjct: 335  RTFPRMPT-MVSVVEDAPVNVVLRSDTQIPVEEPPRISMNSINEDEAVPGGSAQTRDYYS 393

Query: 877  XXXXXXXXXXXXXXXSNSIRKKAAAVVAELDETKLVSNAKVSPPVLDPFLGTKLLVGDKD 698
                            NSIRK AAAVVAE+DE K                   L+V D+D
Sbjct: 394  DSSSRRRKSLDRS---NSIRKTAAAVVAEIDELKA------------------LVVPDRD 432

Query: 697  LRNLKSSSVRDDCSESFESAFRDTASVTGGVLEXXXXXXXXXXXKAWNIWGLIYRRGGSK 518
             R+  S+S+RDDCSE+F+  FRD AS+ GG  E           KAWNIWG I+RR  +K
Sbjct: 433  FRDSNSNSLRDDCSETFDMGFRDNASLVGGNGERKGAKKPRRWSKAWNIWGFIHRRSVNK 492

Query: 517  DEDEDRYSR---VERSFSESWPELRREPLNGDAKGDXXXXXXXXXXXXXXXS---YNMSG 356
            ++D+DRYSR   VERSFSESWPELR E  NGD +G                +   +   G
Sbjct: 493  EDDDDRYSRANGVERSFSESWPELRGER-NGDVRGGFNPKILRSNSSVSWRNSHNFGGGG 551

Query: 355  SFNSSRRNAAETXXXXXXXXXEYMLDRNRSGRYSSNDIDNGLLRFYLTPMRSGRRNGSGK 176
            SF+S+R+++ ET         E++L+RNRS RYS N+++NGLLRFYLTP+R+ RRNG GK
Sbjct: 552  SFSSARKSSVETNGNGRKKRDEFVLERNRSARYSPNNMENGLLRFYLTPLRNSRRNGWGK 611

Query: 175  SVPKSSHTLANSALRMY 125
            S    + ++A S LR+Y
Sbjct: 612  SKSSQAQSIARSVLRLY 628


>ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|222854183|gb|EEE91730.1|
            predicted protein [Populus trichocarpa]
          Length = 686

 Score =  224 bits (571), Expect = 3e-56
 Identities = 148/322 (45%), Positives = 184/322 (57%), Gaps = 15/322 (4%)
 Frame = -3

Query: 1045 RTLSRVPPPMVSLGEHVPISV----PRFDNLIPVEEP-RISVT-----EEATTTPGGSAQ 896
            RT  R+P  MVS+ E  P++V     R D  IPVEEP RIS+      +E  T PGGS Q
Sbjct: 389  RTFPRMPT-MVSVVEDAPVNVVNVVSRSDTQIPVEEPPRISMNSINEDDEDETVPGGSVQ 447

Query: 895  TRDYYXXXXXXXXXXXXXXXXSNSIRKKAAAVVAELDETKLVSNAKVSPPVLDPFLGTKL 716
            TRDYY                 NSIRK AAAVVAE+DE K                   L
Sbjct: 448  TRDYYSDSSSRRRKSLDRS---NSIRKTAAAVVAEIDELKA------------------L 486

Query: 715  LVGDKDLRNLKSSSVRDDCSESFESAFRDTASVTGGVLEXXXXXXXXXXXKAWNIWGLIY 536
            +V D+D R+  S+S+RDDCSE+F+  FRD ASV G   E           KAW+IWG I+
Sbjct: 487  VVPDRDFRDSNSNSLRDDCSENFDMGFRDNASVVGNG-ERKGVKKPRRWSKAWSIWGFIH 545

Query: 535  RRGGSKDEDEDRYSR---VERSFSESWPELRREPLNGDAKGDXXXXXXXXXXXXXXXSYN 365
            RR  +KDEDEDRYSR   VERSFSESWPELR E  NGD +G                + +
Sbjct: 546  RRSVNKDEDEDRYSRANGVERSFSESWPELRGER-NGDVRGGFNPKMLRSNSSVSWRNSH 604

Query: 364  M--SGSFNSSRRNAAETXXXXXXXXXEYMLDRNRSGRYSSNDIDNGLLRFYLTPMRSGRR 191
                GSF+S+R+++ ET         E++L+RNRS RYS N++DNGLLRFYLTP+R+ RR
Sbjct: 605  NFGGGSFSSARKSSVETNGNGRKKRDEFVLERNRSARYSPNNMDNGLLRFYLTPLRNSRR 664

Query: 190  NGSGKSVPKSSHTLANSALRMY 125
            NG GKS    + ++A S LR+Y
Sbjct: 665  NGWGKSKSSHAQSIARSVLRLY 686


>ref|XP_004137734.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
            sativus] gi|449533170|ref|XP_004173550.1| PREDICTED:
            UPF0503 protein At3g09070, chloroplastic-like [Cucumis
            sativus]
          Length = 631

 Score =  204 bits (518), Expect = 4e-50
 Identities = 144/316 (45%), Positives = 176/316 (55%), Gaps = 9/316 (2%)
 Frame = -3

Query: 1045 RTLSRVPPPMVSLGEHVPISVPRFDNLIPVEEPRISVTEEATTTPGGSAQTRDYYXXXXX 866
            RT  R+P  M+S+ E  PI V R D  IPVE+  I+ T E    PGGS+QTR+YY     
Sbjct: 329  RTFPRMPT-MLSVVEDAPIHVFRSDTQIPVEDS-INSTNEEENIPGGSSQTREYYSDSSS 386

Query: 865  XXXXXXXXXXXSNSIRKKAAAVVAELDETKL-VSNAKVSPPVLDPFLGTKLLVGDKDLRN 689
                        NSIRK AAAVVAE+D+ K  VSNAKVSP   D   G KL + D+D   
Sbjct: 387  RRRKSLDRS---NSIRKTAAAVVAEIDDMKSSVSNAKVSPATTDVSHGPKLGIPDRDSN- 442

Query: 688  LKSSSVRDDCSESFESAFRDTASVTGGVLEXXXXXXXXXXXKAWNIWGLIYRRGGSKDED 509
              S+S+RDD S SFE    D ASV G               K W IWGLI RRGG+KDE+
Sbjct: 443  --SNSLRDDYSGSFE----DAASVVGTANRKEESKKSKGWGKGWKIWGLINRRGGNKDEE 496

Query: 508  EDRYSR----VERSFSESWPELRREPLNGDAK--GDXXXXXXXXXXXXXXXSYNMSGSFN 347
            EDR S     VERS+SESWPELR +  NGD K  G                +  + GSF+
Sbjct: 497  EDRESSRPNGVERSYSESWPELRGDR-NGDVKAGGFNPKMFRSNSSVSWRSASMIGGSFS 555

Query: 346  SSRRNAAETXXXXXXXXXEY--MLDRNRSGRYSSNDIDNGLLRFYLTPMRSGRRNGSGKS 173
            SSR++ AE+         E   +L+RNRS R S  ++DNGLLRFYLTP+R  RR  SGK 
Sbjct: 556  SSRKSNAESNGNGKKKKEEAQPVLERNRSARQSPTNVDNGLLRFYLTPLRGSRRGESGKV 615

Query: 172  VPKSSHTLANSALRMY 125
             P  + ++A S LR+Y
Sbjct: 616  KPSQAQSIARSVLRLY 631