BLASTX nr result

ID: Coptis24_contig00004076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004076
         (1448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312290.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-18
ref|XP_002273558.1| PREDICTED: uncharacterized protein LOC100268...    95   5e-17
ref|XP_002512056.1| conserved hypothetical protein [Ricinus comm...    91   1e-15
emb|CBI27315.3| unnamed protein product [Vitis vinifera]               80   1e-12
ref|XP_003628745.1| hypothetical protein MTR_8g066290 [Medicago ...    69   4e-09

>ref|XP_002312290.1| predicted protein [Populus trichocarpa] gi|222852110|gb|EEE89657.1|
            predicted protein [Populus trichocarpa]
          Length = 1312

 Score = 97.8 bits (242), Expect = 6e-18
 Identities = 67/195 (34%), Positives = 100/195 (51%), Gaps = 2/195 (1%)
 Frame = -2

Query: 1426 SVKDDLDLESLRFANSLKEDVALSQERKLVG-SEDHRCTSPVTGLSKEEEHIDTLLAADT 1250
            S KDD  L+S+ F++ L E  A   E  ++  S+  + T+ V  LS E++ +D  L    
Sbjct: 291  SAKDDFPLKSVDFSDHLTEKAAPGPEESMLAWSKSSKSTTGVVNLSVEDKILDRSLDTKV 350

Query: 1249 LGSN-SSEADKDETGKTSSREFKSVKTLDLYVPDSLDILQDNVSDSALKHKKASPCQIKN 1073
             GSN +   +      T+ ++   V  +DL  PD+LD  QDN+++SA      S C ++ 
Sbjct: 351  EGSNFTMSVEGQAEDATAPKDQPCVPNVDLCAPDTLDFEQDNITNSAQATHDISACSVRE 410

Query: 1072 EQDAPGLVFSEDMVRSSPLENEVDTYSPNGNSERSNDDSAEQDFANSMMTXXXXXXXXXL 893
            E      + S+ ++  S  E  + T + NGNSERS+ DSA QD A SMMT         L
Sbjct: 411  ELLVTEAITSQGLITESHPEEVIGTPNSNGNSERSDFDSAGQDIAKSMMTFLLPQAIPLL 470

Query: 892  KKTSGRKRKKVRTSE 848
            K  S RK+K +  SE
Sbjct: 471  KNKS-RKKKTIGYSE 484


>ref|XP_002273558.1| PREDICTED: uncharacterized protein LOC100268093 [Vitis vinifera]
          Length = 1242

 Score = 94.7 bits (234), Expect = 5e-17
 Identities = 89/298 (29%), Positives = 138/298 (46%), Gaps = 26/298 (8%)
 Frame = -2

Query: 1426 SVKDDLDLESLRFANSLKEDVALSQER-KLVGSEDHRCTSPVTGLSKEEE----HIDTLL 1262
            + KD L LE++   + L+E+  + QE  KLV SE++  T  V   S EE+    ++  L 
Sbjct: 223  NAKDGLPLETVGLCDHLREEALILQEEGKLVSSENYISTRAVNIPSIEEKPVKLYLIVLY 282

Query: 1261 AADTLGS----NSSEADKDE------TGKTSSREFKSVKTL-----------DLYVPDSL 1145
              +   S    N S+ D+ +       G ++  E  +++T+           D   PD+L
Sbjct: 283  TVNWFSSRNILNFSQLDRSKHIKVQGLGYSTPIEDNNMETIFPKSSQGFSNVDHCAPDTL 342

Query: 1144 DILQDNVSDSALKHKKASPCQIKNEQDAPGLVFSEDMVRSSPLENEVDTYSPNGNSERSN 965
            D +QDN S  A    K  P  +K+E  A  +   E  V  S LE EV TY+ NG+SERS+
Sbjct: 343  DHMQDNTSAYASTAHKEGPDNVKDELTAADMTIFEGSVTESHLEGEVGTYTSNGSSERSD 402

Query: 964  DDSAEQDFANSMMTXXXXXXXXXLKKTSGRKRKKVRTSESSFSNGDVRLNLATTKSSEES 785
             DS  Q+ A SMMT         LK+TS +K+          +N  + L+    +S +E+
Sbjct: 403  FDSVGQEVAKSMMTVLLPQALPLLKETSRKKKA---------TNNHLGLSFYRAESLDEN 453

Query: 784  HGMHTYNKLSSGEPKTGTCAEGSLKDREGQPRCLSTAPCFESENLENIKSVVPDSLED 611
             G      ++S        AE S  + E + +           + E++KSV+PDS ED
Sbjct: 454  SGACPIVNVAS---PALVLAENSPVEMEEKVQTFRRDFDPVIPSFEHVKSVIPDSFED 508


>ref|XP_002512056.1| conserved hypothetical protein [Ricinus communis]
            gi|223549236|gb|EEF50725.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1246

 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 86/269 (31%), Positives = 120/269 (44%), Gaps = 40/269 (14%)
 Frame = -2

Query: 1438 NNSFSVKDDLDLESLRFANSLKEDVALS-QERKLVGSEDHRCTSPVTGLSKEEEHIDTLL 1262
            N   S KDDL LE + + N L E    S +E KL GSE++   + V+    EE+ +D L 
Sbjct: 258  NAQSSAKDDLLLEFVHYPNHLMEKAVSSYEESKLAGSENNESNTAVSNSCLEEKPLDRLQ 317

Query: 1261 AADTLGSNSS--------EADKDETGKT-------------------SSREFK------- 1184
              +   SN +        +A + E  +T                   +S EFK       
Sbjct: 318  DTEVKESNFAASPKLKAVDAPRLEKSQTVNDVDLCVPDTELQGLNFPASLEFKAVDDPCP 377

Query: 1183 ----SVKTLDLYVPDSLDILQDNVSDSALKHKKASPCQIKNEQDAPGLVFSEDMVRSSPL 1016
                SV  ++L  PD+LD LQD+  +SA        C +K       LV SE +V +S L
Sbjct: 378  EESQSVHDVNLCAPDTLDFLQDDTKNSAPITSDKITCGVKEVLMVTDLVVSEHLVNTSCL 437

Query: 1015 ENEVDTYS-PNGNSERSNDDSAEQDFANSMMTXXXXXXXXXLKKTSGRKRKKVRTSESSF 839
            E E    S  N  SE+S+ DS  QD A SMMT         LKKTS +K+K + +S++  
Sbjct: 438  EEEEAGISNSNVGSEKSDFDSVGQDIAKSMMTVLLPQAVPLLKKTSRKKKKTINSSKNFP 497

Query: 838  SNGDVRLNLATTKSSEESHGMHTYNKLSS 752
            S         T K  EES+G  ++ K  S
Sbjct: 498  S---------TCKPYEESNGTGSFMKAQS 517


>emb|CBI27315.3| unnamed protein product [Vitis vinifera]
          Length = 1177

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 69/199 (34%), Positives = 93/199 (46%), Gaps = 2/199 (1%)
 Frame = -2

Query: 1201 SSREFKSVKTLDLYVPDSLDILQDNVSDSALKHKKASPCQIKNEQDAPGLVFSEDMVRSS 1022
            SS+ F +V   D   PD+LD +QDN S  A    K  P  +K+E  A  +   E  V  S
Sbjct: 318  SSQGFSNV---DHCAPDTLDHMQDNTSAYASTAHKEGPDNVKDELTAADMTIFEGSVTES 374

Query: 1021 PLENEVDTYSPNGNSERSNDDSAEQDFANSMMTXXXXXXXXXLKKTSGRKRKKVRTSESS 842
             LE EV TY+ NG+SERS+ DS  Q+ A SMMT         LK+TS +K+         
Sbjct: 375  HLEGEVGTYTSNGSSERSDFDSVGQEVAKSMMTVLLPQALPLLKETSRKKKA-------- 426

Query: 841  FSNGDVRLNLATTKSSEESHGM--HTYNKLSSGEPKTGTCAEGSLKDREGQPRCLSTAPC 668
             +N  + L+    +S +E+ G      N     E K  T        R+  P      P 
Sbjct: 427  -TNNHLGLSFYRAESLDENSGACPIVNNSPVEMEEKVQTFR------RDFDP----VIPS 475

Query: 667  FESENLENIKSVVPDSLED 611
            F     E++KSV+PDS ED
Sbjct: 476  F-----EHVKSVIPDSFED 489


>ref|XP_003628745.1| hypothetical protein MTR_8g066290 [Medicago truncatula]
            gi|355522767|gb|AET03221.1| hypothetical protein
            MTR_8g066290 [Medicago truncatula]
          Length = 1244

 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 1/214 (0%)
 Frame = -2

Query: 1237 SSEADKDETGKTSSREFKSVKTLDLYVPDSLDILQDNVSDSALKHKKASPCQIKNEQDAP 1058
            S  A+ D   ++ S+E +    +DL+ PDS+D LQ+N+SDSA  +       +KN    P
Sbjct: 337  SVTAEDDIVMQSRSKESQGCIGIDLWAPDSVD-LQENISDSAPSNL------VKNTDSKP 389

Query: 1057 GL-VFSEDMVRSSPLENEVDTYSPNGNSERSNDDSAEQDFANSMMTXXXXXXXXXLKKTS 881
               V SED++ S     E+     N +SE+++ +SA QD A SMM+         L+  S
Sbjct: 390  ACEVTSEDLLNSK--HEEMLRSDSNPSSEKNHFNSAGQDVAKSMMSLLLPQAVPLLRNVS 447

Query: 880  GRKRKKVRTSESSFSNGDVRLNLATTKSSEESHGMHTYNKLSSGEPKTGTCAEGSLKDRE 701
              ++  +  S       D+  ++AT  S +E + +     + S +    T A G   ++ 
Sbjct: 448  TDEKLTLIPS-------DILPSMATN-SKDEQNEVGCVLDVPSCDKMVTTDAYGEQGEKT 499

Query: 700  GQPRCLSTAPCFESENLENIKSVVPDSLEDTSYQ 599
             +P   +T P   S N +++KS+VPDS E T ++
Sbjct: 500  HKP---NTYPHSNSSNTDHMKSIVPDSFEYTQFE 530


Top