BLASTX nr result

ID: Coptis24_contig00004073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004073
         (1234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310610.1| predicted protein [Populus trichocarpa] gi|2...   199   9e-49
ref|XP_002310609.1| predicted protein [Populus trichocarpa] gi|2...   197   3e-48
ref|XP_002307134.1| predicted protein [Populus trichocarpa] gi|2...   194   4e-47
ref|XP_002533354.1| WRKY transcription factor, putative [Ricinus...   192   2e-46
ref|XP_004148451.1| PREDICTED: probable WRKY transcription facto...   188   3e-45

>ref|XP_002310610.1| predicted protein [Populus trichocarpa] gi|222853513|gb|EEE91060.1|
            predicted protein [Populus trichocarpa]
          Length = 190

 Score =  199 bits (507), Expect = 9e-49
 Identities = 105/188 (55%), Positives = 138/188 (73%), Gaps = 5/188 (2%)
 Frame = -3

Query: 1100 YIPQDFNNSNHTYTYLMDHLD--LIDFEVSDFLIPEAGSEEDSTSTQIDYGQSNPVLSEK 927
            Y PQ+   S + Y+Y+ + LD   I+F+ SD+L+ + G  ED +S+Q      N V SE+
Sbjct: 3    YYPQNPKPS-YNYSYINEGLDPWAIEFQPSDYLMLDDGFGEDDSSSQ------NMVSSEQ 55

Query: 926  --SDETMAYDGDDNKRTTRNINVKSGMKKTKTDVGVRIAFRTKSELEIMDDGYKWRKYGK 753
              S  +  Y G     T+RN ++++G+KK KT+V  R+AFRTKSELEIMDDG+KWRKYGK
Sbjct: 56   VASGSSTGYSG----ATSRNNSMQNGVKKNKTEVEHRVAFRTKSELEIMDDGFKWRKYGK 111

Query: 752  KAVKNTPNPRNYYRCSHQGCHVKKRVEREKEDPSYVITTYDGVHNHESPSIVYY-NEMPL 576
            K+VKN+PNPRNYY+CS  GC+VKKRVER++ED  YV+T+YDGVHNHESP +VYY N+MPL
Sbjct: 112  KSVKNSPNPRNYYKCSSGGCNVKKRVERDREDSRYVLTSYDGVHNHESPCMVYYNNQMPL 171

Query: 575  MVPNGWTL 552
            M  N WTL
Sbjct: 172  MASNAWTL 179


>ref|XP_002310609.1| predicted protein [Populus trichocarpa] gi|222853512|gb|EEE91059.1|
            predicted protein [Populus trichocarpa]
          Length = 190

 Score =  197 bits (502), Expect = 3e-48
 Identities = 104/188 (55%), Positives = 137/188 (72%), Gaps = 5/188 (2%)
 Frame = -3

Query: 1100 YIPQDFNNSNHTYTYLMDHLD--LIDFEVSDFLIPEAGSEEDSTSTQIDYGQSNPVLSEK 927
            Y PQ+   S + Y+Y+ + LD   I+F+ SD+L+ + G  ED +S+Q      N V  E+
Sbjct: 3    YYPQNPKPS-YNYSYINEGLDPWAIEFQPSDYLMLDDGFGEDDSSSQ------NMVSPEQ 55

Query: 926  --SDETMAYDGDDNKRTTRNINVKSGMKKTKTDVGVRIAFRTKSELEIMDDGYKWRKYGK 753
              S  +  Y G     T+RN ++++G+KK KT+V  R+AFRTKSELEIMDDG+KWRKYGK
Sbjct: 56   VASGSSTGYSG----ATSRNNSMQNGVKKNKTEVEHRVAFRTKSELEIMDDGFKWRKYGK 111

Query: 752  KAVKNTPNPRNYYRCSHQGCHVKKRVEREKEDPSYVITTYDGVHNHESPSIVYY-NEMPL 576
            K+VKN+PNPRNYY+CS  GC+VKKRVER++ED  YV+T+YDGVHNHESP +VYY N+MPL
Sbjct: 112  KSVKNSPNPRNYYKCSSGGCNVKKRVERDREDSRYVLTSYDGVHNHESPCMVYYNNQMPL 171

Query: 575  MVPNGWTL 552
            M  N WTL
Sbjct: 172  MASNAWTL 179


>ref|XP_002307134.1| predicted protein [Populus trichocarpa] gi|222856583|gb|EEE94130.1|
            predicted protein [Populus trichocarpa]
          Length = 188

 Score =  194 bits (493), Expect = 4e-47
 Identities = 99/178 (55%), Positives = 129/178 (72%), Gaps = 3/178 (1%)
 Frame = -3

Query: 1079 NSNHTYTYLMDHLD--LIDFEVSDFLIPEAGSEEDSTSTQIDYGQSNPVLSEKSDETMAY 906
            N NH ++Y  +  D    +F+VSD+L+ + G  ED++S+Q     S  V S  S     Y
Sbjct: 7    NPNHDFSYFNEGFDPPATEFQVSDYLMLDDGFGEDNSSSQ-SMASSEQVPSGSSS---GY 62

Query: 905  DGDDNKRTTRNINVKSGMKKTKTDVGVRIAFRTKSELEIMDDGYKWRKYGKKAVKNTPNP 726
             G     T+RN ++++G+KK K + G R+AFRTKSELE+MDDG+KWRKYGKK+VKN+P+P
Sbjct: 63   SG----ATSRNNSMQNGVKKNKIEGGHRVAFRTKSELEVMDDGFKWRKYGKKSVKNSPHP 118

Query: 725  RNYYRCSHQGCHVKKRVEREKEDPSYVITTYDGVHNHESPSIVYY-NEMPLMVPNGWT 555
            RNYY+CS  GC VKKRVER+ ED +YVITTYDGVHNHESP +VYY N++PL VPN WT
Sbjct: 119  RNYYKCSSGGCDVKKRVERDGEDSAYVITTYDGVHNHESPCMVYYNNQIPLAVPNAWT 176


>ref|XP_002533354.1| WRKY transcription factor, putative [Ricinus communis]
            gi|223526806|gb|EEF29027.1| WRKY transcription factor,
            putative [Ricinus communis]
          Length = 215

 Score =  192 bits (487), Expect = 2e-46
 Identities = 104/207 (50%), Positives = 138/207 (66%), Gaps = 17/207 (8%)
 Frame = -3

Query: 1121 DYTSQPTYIPQDFNNSNHTYTYLMD-HLDLIDFEVSDFLIPEAGSEEDSTSTQIDYGQSN 945
            DY + P   P ++N S+  +  +MD  L  ++F++SDFL+ + G  +DS+S      QS 
Sbjct: 10   DYPANPN--PNNYNYSH--FDPIMDPSLQPVEFQLSDFLMLDGGFGDDSSS------QST 59

Query: 944  PVLSEK---SDETMAYDGDDNKRTTRNINV---KSGMKKTKTDVGVRIAFRTKSELEIMD 783
             VLS++      T    G     T+ N N    K G+KK K +VG R+AFRTKSELEIMD
Sbjct: 60   MVLSDQFASGASTEYSSGTAASATSENANNDKWKKGVKKEKAEVGHRVAFRTKSELEIMD 119

Query: 782  DGYKWRKYGKKAVKNTPNPRNYYRCSHQGCHVKKRVEREKEDPSYVITTYDGVHNHESPS 603
            DG+KWRKYGKK+VKN+P+PRNYY+CS  GC VKKRVER++EDP YVITTYDG+HNH++P 
Sbjct: 120  DGFKWRKYGKKSVKNSPHPRNYYKCSSGGCSVKKRVERDREDPKYVITTYDGMHNHQTPC 179

Query: 602  IVYYN----------EMPLMVPNGWTL 552
            +VYYN          ++P+M PNGW L
Sbjct: 180  VVYYNHHHRHHYHQDQVPVMNPNGWNL 206


>ref|XP_004148451.1| PREDICTED: probable WRKY transcription factor 51-like [Cucumis
            sativus]
          Length = 205

 Score =  188 bits (477), Expect = 3e-45
 Identities = 95/200 (47%), Positives = 132/200 (66%), Gaps = 17/200 (8%)
 Frame = -3

Query: 1127 MADYTSQPTYIPQDFNNSNHT-YTYLMDHLDLIDFEVSDFLI----------------PE 999
            MA +  + + +  + N +N+T +  ++D     DFE+SDFL+                P 
Sbjct: 1    MASFPYEDSNLNPNPNPNNYTHFPPILDPASFFDFELSDFLLFGDDNNIVVDQVASSSPS 60

Query: 998  AGSEEDSTSTQIDYGQSNPVLSEKSDETMAYDGDDNKRTTRNINVKSGMKKTKTDVGVRI 819
              S E  TS  +D G S+ V+   S   ++  G     +T +I  K+G KK K ++G R+
Sbjct: 61   MTSSEKITSGGVDSGGSSTVIDTGSSVVVSSSG----ASTTSIRSKNGEKKRKGEMGCRV 116

Query: 818  AFRTKSELEIMDDGYKWRKYGKKAVKNTPNPRNYYRCSHQGCHVKKRVEREKEDPSYVIT 639
            AFRTKSE EIMDDGYKWRKYGKK+VKN+PNPRNYY+CS +GC+VKK+VER++ED +YVIT
Sbjct: 117  AFRTKSEQEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCNVKKKVERDREDANYVIT 176

Query: 638  TYDGVHNHESPSIVYYNEMP 579
            TY+G+HNHESP +VYYN++P
Sbjct: 177  TYEGIHNHESPFVVYYNQLP 196


Top