BLASTX nr result

ID: Coptis24_contig00004072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004072
         (1504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81147.1| hypothetical protein VITISV_020812 [Vitis vinifera]   566   e-159
ref|XP_003631965.1| PREDICTED: uncharacterized protein LOC100853...   563   e-158
ref|XP_002315471.1| predicted protein [Populus trichocarpa] gi|2...   535   e-149
ref|XP_002519332.1| conserved hypothetical protein [Ricinus comm...   508   e-141
ref|XP_003594887.1| hypothetical protein MTR_2g035830 [Medicago ...   492   e-136

>emb|CAN81147.1| hypothetical protein VITISV_020812 [Vitis vinifera]
          Length = 1050

 Score =  567 bits (1460), Expect = e-159
 Identities = 287/464 (61%), Positives = 336/464 (72%), Gaps = 4/464 (0%)
 Frame = +3

Query: 6    MDGGFWDLDLSTPVTVDGIARPVPNHPLPLGLSRGTKLSRPKQVDFLQRFMFLPFVPSYX 185
            MDGGFW+LD+ST  T+DG+AR VP+ PLPLGLSRGT+LSRP Q+DF QRFM +PFVPS  
Sbjct: 593  MDGGFWELDISTATTLDGVARAVPDDPLPLGLSRGTRLSRPMQIDFFQRFMSMPFVPS-- 650

Query: 186  XXXXXXXXXXXXXXERVFALPFNDNWFATVLGQFNLQKLVSFVKETGLRHSAESSWLKNL 365
                          +R F  PF +NWFA++LGQFN QK VS VKE  L   +ESSWL+ +
Sbjct: 651  ----SSISTHGFSLQRGFTFPFTENWFASLLGQFNFQKFVSSVKEGRLLQPSESSWLQGI 706

Query: 366  GNHLSDKSFYALGLCSEFFITPDDTFLVSSEVYGDKKTRRSKAVYHHKFPHHNLKVEAAW 545
            G   SDKS YALGL SE  ITPDDT LVS E YGDKK  R KAV+ HKFP+HNL VEA W
Sbjct: 707  GRRFSDKSLYALGLSSELLITPDDTLLVSLEAYGDKKVPRKKAVFLHKFPNHNLMVEAVW 766

Query: 546  PGLFIDNTGTYWDVPSLVEIDFASIASDSGSSYHFCVHRKKGTPIQFYSDQVAE-HAALH 722
            PGLF+D  GTYWDVP  + ID AS+ASDSG+SYH  VH   GTP QF  +Q  E  A L 
Sbjct: 767  PGLFVDKFGTYWDVPLSMAIDLASVASDSGASYHLSVHHNTGTPKQFDGNQTHEVPATLL 826

Query: 723  PGLCFKSGFSVKKNIDIWRSKEGKLKMVQPFDVFLSDPHLSASGILGTVLTASLGDSSMR 902
            PGLC K  F++KKNID+WRSK  KLKMVQPFD+FLS+PH+S SGI+G   TA LGD+S+R
Sbjct: 827  PGLCAKGAFALKKNIDLWRSKAQKLKMVQPFDIFLSNPHISFSGIIGAAGTACLGDNSVR 886

Query: 903  SQRED---WFAGINFCRPENKCALLGDFFVSLSCTAQHGNFQRFFFDLTRAHARLDFPSG 1073
             Q ED    F G+    P  K ALL D F S++ TAQHGNFQR F DLTR +ARLDFPSG
Sbjct: 887  VQVEDESHGFKGLKLHLPRVKSALLADIFASVAFTAQHGNFQRLFLDLTRFYARLDFPSG 946

Query: 1074 SNLVAGAARLAQDLYKSQRPDLEAVQAVCPKVTLSFQQQIFGEFSFRVDSSLAFDLTRRD 1253
            S  +AG  RL QDLY SQ+P LEA QA+CP  TLS QQQI G FSFR+DS +A +L  R+
Sbjct: 947  SKFLAGTTRLTQDLYNSQQPSLEAFQAICPTATLSLQQQIVGPFSFRIDSGVAVNLKNRE 1006

Query: 1254 RCPQVDDTVYSLEYALKVLGSAKAVAWYSSKNREAMVELRFFET 1385
                VD+ V+++EYAL+VLGSAKA+AWYS K+ E MVELRFFET
Sbjct: 1007 WHIDVDEPVFAIEYALQVLGSAKAIAWYSPKHEEFMVELRFFET 1050


>ref|XP_003631965.1| PREDICTED: uncharacterized protein LOC100853208 [Vitis vinifera]
            gi|297736817|emb|CBI26018.3| unnamed protein product
            [Vitis vinifera]
          Length = 465

 Score =  563 bits (1450), Expect = e-158
 Identities = 285/463 (61%), Positives = 334/463 (72%), Gaps = 4/463 (0%)
 Frame = +3

Query: 6    MDGGFWDLDLSTPVTVDGIARPVPNHPLPLGLSRGTKLSRPKQVDFLQRFMFLPFVPSYX 185
            MDGGFW+LD+ST  T+DG+AR VP+ PLPLGLSRGT+LSRP Q+DF QRFM +PFVPS  
Sbjct: 8    MDGGFWELDMSTATTLDGVARAVPDDPLPLGLSRGTRLSRPMQIDFFQRFMSMPFVPS-- 65

Query: 186  XXXXXXXXXXXXXXERVFALPFNDNWFATVLGQFNLQKLVSFVKETGLRHSAESSWLKNL 365
                          +R F  PF +NWFA++LGQFN QK VS VKE  L   +ESSWL+ +
Sbjct: 66   ----SSISTHGFSLQRGFTFPFTENWFASLLGQFNFQKFVSSVKEGRLLQPSESSWLQGI 121

Query: 366  GNHLSDKSFYALGLCSEFFITPDDTFLVSSEVYGDKKTRRSKAVYHHKFPHHNLKVEAAW 545
            G   SDKS YALGL SE  ITPDDT LVS E YGDKK  R KAV+ HKFP+HNL VEA W
Sbjct: 122  GRRFSDKSLYALGLSSELLITPDDTLLVSLEAYGDKKVPRKKAVFLHKFPNHNLMVEAVW 181

Query: 546  PGLFIDNTGTYWDVPSLVEIDFASIASDSGSSYHFCVHRKKGTPIQFYSDQVAE-HAALH 722
            PGLF+D  GTYWDVP  + ID AS+ASDSG+SYH  VH   GTP QF  +Q  E  A L 
Sbjct: 182  PGLFVDKFGTYWDVPLSMAIDLASVASDSGASYHLSVHHNTGTPKQFDGNQTHEVPATLL 241

Query: 723  PGLCFKSGFSVKKNIDIWRSKEGKLKMVQPFDVFLSDPHLSASGILGTVLTASLGDSSMR 902
            PGLC K  F++KKNID+WRSK  KLKMVQPFD+FLS+PH+S SGI+G   TA LGD+S+R
Sbjct: 242  PGLCAKGAFALKKNIDLWRSKAQKLKMVQPFDIFLSNPHISFSGIIGAAGTACLGDNSVR 301

Query: 903  SQRED---WFAGINFCRPENKCALLGDFFVSLSCTAQHGNFQRFFFDLTRAHARLDFPSG 1073
             Q ED    F G     P  K AL+ D F S++ TAQHGNFQR F DLTR +ARLDFPSG
Sbjct: 302  VQVEDESHGFKGFKLHLPRVKSALVADIFASVAFTAQHGNFQRLFLDLTRFYARLDFPSG 361

Query: 1074 SNLVAGAARLAQDLYKSQRPDLEAVQAVCPKVTLSFQQQIFGEFSFRVDSSLAFDLTRRD 1253
            S  +AG  RL QDLY SQ+P LEA QA+CP  TLS QQQI G FSFR+DS +A +L  R+
Sbjct: 362  SKFLAGTTRLTQDLYNSQQPSLEAFQAICPTATLSLQQQIVGPFSFRIDSGVAVNLKNRE 421

Query: 1254 RCPQVDDTVYSLEYALKVLGSAKAVAWYSSKNREAMVELRFFE 1382
                VD+ V+++EYAL+VLGSAKA+AWYS K+ E MVELRFFE
Sbjct: 422  WHIDVDEPVFAIEYALQVLGSAKAIAWYSPKHEEFMVELRFFE 464


>ref|XP_002315471.1| predicted protein [Populus trichocarpa] gi|222864511|gb|EEF01642.1|
            predicted protein [Populus trichocarpa]
          Length = 466

 Score =  535 bits (1378), Expect = e-149
 Identities = 276/468 (58%), Positives = 328/468 (70%), Gaps = 8/468 (1%)
 Frame = +3

Query: 6    MDGGFWDLDLSTPVTVDGIARPVPNHPLPLGLSRGTKLSRPKQVDFLQRFMFLPFVPSYX 185
            MDGGFWDLD STP T++G  R VP  PLPLG+SRGT+LSRPKQ+DF QRFMF PF+PSY 
Sbjct: 8    MDGGFWDLDRSTPRTLEGEGRAVPGEPLPLGVSRGTRLSRPKQIDFFQRFMFAPFIPSYS 67

Query: 186  XXXXXXXXXXXXXXERVFALPFNDNWFATVLGQFNLQKLVSFVKETGLRHSAESSWLKNL 365
                          +RV ALPF  +WFAT+L QFNLQK VS  K+ G   + +SS L+N+
Sbjct: 68   ASSHGLSL------QRVLALPFTQDWFATLLAQFNLQKFVSSFKKNG---ALQSSRLENI 118

Query: 366  GNHLSDKSFYALGLCSEFFITPDDTFLVSSEVYGD--KKTRRSKAVYHHK--FPHHNLKV 533
              HL DKS YALG CSE  ++P DT L+S + YGD   K  R KA++HHK  FP+HNL V
Sbjct: 119  RKHLEDKSLYALGFCSELLLSPCDTLLLSLDFYGDDNNKKPRKKAIFHHKACFPNHNLNV 178

Query: 534  EAAWPGLFIDNTGTYWDVPSLVEIDFASIASDSGSSYHFCVHRKKGTPIQFYSDQVAE-H 710
            EA WPGL+ID  G YWDVP  + ID AS+ASDSG+SYHFC+H   G P+Q   D+  E  
Sbjct: 179  EAVWPGLYIDKAGNYWDVPFSMAIDLASLASDSGASYHFCMHHSAGQPMQLGGDETVEVP 238

Query: 711  AALHPGLCFKSGFSVKKNIDIWRSKEGKLKMVQPFDVFLSDPHLSASGILGTVLTASLGD 890
            A L PG+  KS FS+KKN++IWRS   KLKMVQPFD+FLS+PH+SASG++G  + A  GD
Sbjct: 239  ATLLPGISLKSAFSLKKNVEIWRSNAQKLKMVQPFDIFLSNPHISASGVIGAAVMACFGD 298

Query: 891  SSMRSQRED---WFAGINFCRPENKCALLGDFFVSLSCTAQHGNFQRFFFDLTRAHARLD 1061
            +S+R Q  D    F G     P  K  LL D F S+S TAQHGNFQR   DLTR HARLD
Sbjct: 299  NSVRPQVVDESQQFEGFCLHAPAVKSTLLVDTFSSVSFTAQHGNFQRLLLDLTRFHARLD 358

Query: 1062 FPSGSNLVAGAARLAQDLYKSQRPDLEAVQAVCPKVTLSFQQQIFGEFSFRVDSSLAFDL 1241
            FPS S  ++GA RLAQD   SQRP +E VQA+CPK T+SFQQQI G FSFRVDS +  D 
Sbjct: 359  FPSASKFLSGAIRLAQDFCNSQRPTMETVQAICPKATVSFQQQIAGPFSFRVDSGVEIDW 418

Query: 1242 TRRDRCPQVDDTVYSLEYALKVLGSAKAVAWYSSKNREAMVELRFFET 1385
              +D    VDD V+++EYAL VLGSAKAVAWYS K+RE MVELRFFET
Sbjct: 419  KNKDWHMCVDDPVFAIEYALHVLGSAKAVAWYSPKHREFMVELRFFET 466


>ref|XP_002519332.1| conserved hypothetical protein [Ricinus communis]
            gi|223541647|gb|EEF43196.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 466

 Score =  508 bits (1309), Expect = e-141
 Identities = 262/466 (56%), Positives = 321/466 (68%), Gaps = 6/466 (1%)
 Frame = +3

Query: 6    MDGGFWDLDLSTPVTVDGIARPVPNHPLPLGLSRGTKLSRPKQVDFLQRFMFLPFVPSYX 185
            MDGGFWD+D+STPVT++G+ARPVP  PLPLG+SRGTKLSRPKQ+ F QRFM  PF+PS+ 
Sbjct: 8    MDGGFWDVDVSTPVTLEGVARPVPGDPLPLGISRGTKLSRPKQLHFFQRFMSSPFIPSFS 67

Query: 186  XXXXXXXXXXXXXXERVFALP-FNDNWFATVLGQFNLQKLVSFVKETGLRHSAESSWLKN 362
                          + V A P F+ NWF T+LGQFN QK   FV E+G    + SS L  
Sbjct: 68   SHRHGHGFSL----QSVLAFPTFSQNWFGTLLGQFNFQK---FVSESGASLRSSSSSLNT 120

Query: 363  LGNHLSDKSFYALGLCSEFFITPDDTFLVSSEVYGDK-KTRRSKAVYHHKFPHHNLKVEA 539
            +G  L D S YALG  SE   TPDDT L +   +GD  +  R KAV HHKFP+HNL +EA
Sbjct: 121  IGRQLCDASLYALGFSSELSFTPDDTLLFNFNTHGDATRNSRKKAVLHHKFPNHNLTLEA 180

Query: 540  AWPGLFIDNTGTYWDVPSLVEIDFASIASDSGSSYHFCVHRKKGTPIQFYSDQ-VAEHAA 716
              P LFID++  YWDVP  + ID AS+ SDSG SYHFC+H   G P  F     +A  A 
Sbjct: 181  VSPALFIDSSDNYWDVPFSMAIDLASLPSDSGPSYHFCMHHNAGDPKLFGGGHTLAVPAP 240

Query: 717  LHPGLCFKSGFSVKKNIDIWRSKEGKLKMVQPFDVFLSDPHLSASGILGTVLTASLGDSS 896
            L PG  FKS F+ KKNIDIWRSK  KLKMVQPFD+F+S+PH+SASGI+G  +TA +GD+S
Sbjct: 241  LLPGFSFKSAFAFKKNIDIWRSKAPKLKMVQPFDLFISNPHISASGIVGATMTAYIGDNS 300

Query: 897  MRSQREDWF---AGINFCRPENKCALLGDFFVSLSCTAQHGNFQRFFFDLTRAHARLDFP 1067
            +R Q  D F    G++      K ALL D F S+S TAQHGNFQR F DLTR H RLDFP
Sbjct: 301  VRCQEVDRFQSFTGLSLRAIAPKSALLADMFSSVSLTAQHGNFQRLFLDLTRCHLRLDFP 360

Query: 1068 SGSNLVAGAARLAQDLYKSQRPDLEAVQAVCPKVTLSFQQQIFGEFSFRVDSSLAFDLTR 1247
            SGS  ++GAA+LAQD + SQ+P +E ++A+CP  T+S QQQI G FSFRVDS +A D  +
Sbjct: 361  SGSKFLSGAAKLAQDFFNSQQPSMETIKAICPNATISLQQQIAGPFSFRVDSGVAIDRRK 420

Query: 1248 RDRCPQVDDTVYSLEYALKVLGSAKAVAWYSSKNREAMVELRFFET 1385
            +D    + D V+++EYAL+VLGSAKA+AWY  K +E MVELRFFET
Sbjct: 421  KDWDMHMHDPVFAVEYALQVLGSAKAIAWYCPKQKEFMVELRFFET 466


>ref|XP_003594887.1| hypothetical protein MTR_2g035830 [Medicago truncatula]
            gi|355483935|gb|AES65138.1| hypothetical protein
            MTR_2g035830 [Medicago truncatula]
          Length = 468

 Score =  492 bits (1266), Expect = e-136
 Identities = 258/469 (55%), Positives = 316/469 (67%), Gaps = 8/469 (1%)
 Frame = +3

Query: 3    VMDGG-FWDLDLSTPVTVDGIARPVPNHPLPLGLSRGTKLSRPKQVDFLQRFMFLPFVPS 179
            VMDGG FWDLD+STP T+DG A PVP  PL LGLSRGT+LSRP+Q+ F+Q FM  P  P+
Sbjct: 7    VMDGGGFWDLDISTPKTLDGSACPVPEDPLTLGLSRGTRLSRPRQLQFMQLFMNAPLHPT 66

Query: 180  YXXXXXXXXXXXXXXXERVFALPFNDNWFATVLGQFNLQKLVSFVKETGLRHSAESSWLK 359
            +               +RV +LPF+DNWF  +LGQFNLQK VS VK +  + +  SSWLK
Sbjct: 67   FSQPQGFSL-------QRVLSLPFSDNWFVFLLGQFNLQKFVSSVKSSDEKPARFSSWLK 119

Query: 360  NLGNHLSDKSFYALGLCSEFFITPDDTFLVSSEVYGDKKTRRSKAVYHHKFPHHNLKVEA 539
            N G HL  KS YALGLCSEF +TPDDT L   + Y      R KAV+HHKFPHH+L VEA
Sbjct: 120  NFGRHLQQKSLYALGLCSEFQLTPDDTLLFGLDSYDYTDKPRGKAVFHHKFPHHDLTVEA 179

Query: 540  AWPGLFIDNTGTYWDVPSLVEIDFASIA-SDSGSSYHFCVHRKKGTPIQFYSDQVAEHAA 716
             +PGLF+D  G YWDVP  + +D AS+  SDS + YH   H   G+P QF S Q      
Sbjct: 180  VYPGLFVDKIGNYWDVPLSMAVDLASLTTSDSSAGYHLSAHYNSGSPKQFESIQYENDRV 239

Query: 717  ---LHPGLCFKSGFSVKKNIDIWRSKEGKLKMVQPFDVFLSDPHLSASGILGTVLTASLG 887
               L PGL FKS FS +KN+DIWRS+  KLK++QP+D+FLS+P LSASG++G   TA  G
Sbjct: 240  PQTLLPGLAFKSVFSYRKNLDIWRSETPKLKLIQPYDIFLSNPLLSASGMIGAAATAYFG 299

Query: 888  DSSMRSQRED---WFAGINFCRPENKCALLGDFFVSLSCTAQHGNFQRFFFDLTRAHARL 1058
            ++S R+Q +D     +G+    P  K + L D F S+S TAQHGNFQR F DL+R  ARL
Sbjct: 300  ENSTRAQIDDDGQQSSGLFLQAPGIKSSFLADIFGSVSFTAQHGNFQRLFLDLSRFQARL 359

Query: 1059 DFPSGSNLVAGAARLAQDLYKSQRPDLEAVQAVCPKVTLSFQQQIFGEFSFRVDSSLAFD 1238
            DFPSGS  + GA  LAQDL  SQ+P++EAVQA+CP  TLS QQQI G  SFRVDS +A D
Sbjct: 360  DFPSGSKFLLGATSLAQDLLNSQKPNMEAVQAICPNATLSLQQQIVGPISFRVDSGIAID 419

Query: 1239 LTRRDRCPQVDDTVYSLEYALKVLGSAKAVAWYSSKNREAMVELRFFET 1385
            L       Q  D +Y++E+AL+VLGSAKAVAW   K +E MVELRF+ET
Sbjct: 420  LKNHKWPIQAQDPIYAVEWALQVLGSAKAVAWCCPKRQEFMVELRFYET 468


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