BLASTX nr result

ID: Coptis24_contig00004069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004069
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280836.1| PREDICTED: 2-keto-3-deoxy-L-rhamnonate aldol...   431   e-118
ref|XP_002534296.1| 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldol...   422   e-116
ref|XP_004146130.1| PREDICTED: 2-keto-3-deoxy-L-rhamnonate aldol...   414   e-113
ref|XP_002304576.1| predicted protein [Populus trichocarpa] gi|2...   413   e-113
ref|XP_002872535.1| HpcH/HpaI aldolase family protein [Arabidops...   409   e-112

>ref|XP_002280836.1| PREDICTED: 2-keto-3-deoxy-L-rhamnonate aldolase-like [Vitis
           vinifera]
          Length = 359

 Score =  431 bits (1107), Expect = e-118
 Identities = 227/327 (69%), Positives = 257/327 (78%), Gaps = 22/327 (6%)
 Frame = -2

Query: 962 PYINLPCSEPISLLSLSTHFSKP------LNP-------------RSKSIKSTDLSLPEN 840
           P+   P    I L S    FSKP      LNP              +  + + D S+P  
Sbjct: 17  PHFPKPSKTLIHLPSPKFSFSKPAFNLKTLNPILSQSPAPLRLSNTTSDLIAYDNSVPVP 76

Query: 839 PTLP-KTLKSRLANGETLYGLFLLSFSPTLAEIAGLAGYDFVVVDMEHGPGGISDALPCL 663
             +P ++LKSRL +GETLYGLFLLSFSPTLAEIAGLAGYDFVVVDMEHG GG+SDALPCL
Sbjct: 77  VPVPSRSLKSRLHDGETLYGLFLLSFSPTLAEIAGLAGYDFVVVDMEHGHGGVSDALPCL 136

Query: 662 HALAATGTPAILRLPESTAAWAKKALDIGPQGIMFPMIESSKSAKKAVSFCRFPPGGVRG 483
           HALAAT TPAI+RLPES   WAKKALD+GPQGIMFPMI+S K A+KAVS+CRFPP GVRG
Sbjct: 137 HALAATRTPAIIRLPESCPTWAKKALDLGPQGIMFPMIDSPKLARKAVSYCRFPPAGVRG 196

Query: 482 SAHTLVRASNYGINDGYLANYEEELLIMCQVESEEGVKKIEEIAAVDGVDCIQMGPLDLS 303
           SAHT+VRAS+YGI+ GYL+NYEEELLIMCQVESEE VKKIE+IAAVDGVDCIQMGP+DLS
Sbjct: 197 SAHTVVRASSYGIDAGYLSNYEEELLIMCQVESEEAVKKIEDIAAVDGVDCIQMGPMDLS 256

Query: 302 ASLGYLWDPGNKKVRQVVREAEKGVL--EKKNGGGAYLGGFAMPHDGAEQLRMRGYHMVS 129
           AS+GYLWDPGNKKVR++++ AEKGVL  +KK   GAYL GFAMPHD  + LR RGYHMVS
Sbjct: 257 ASMGYLWDPGNKKVREMMKVAEKGVLGTKKKPREGAYLAGFAMPHDSPDDLRSRGYHMVS 316

Query: 128 GAVDLGLFRSAVVEDVKRFKMNLMNGS 48
           GAVD+GLFRSA VEDVK+FKM L   S
Sbjct: 317 GAVDVGLFRSAAVEDVKKFKMGLKEAS 343


>ref|XP_002534296.1| 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, putative [Ricinus
           communis] gi|223525555|gb|EEF28088.1|
           2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase,
           putative [Ricinus communis]
          Length = 357

 Score =  422 bits (1085), Expect = e-116
 Identities = 216/324 (66%), Positives = 257/324 (79%), Gaps = 7/324 (2%)
 Frame = -2

Query: 953 NLPCSEPISLLSLSTHFSKPLNPRSKSIKSTDLSLPENPTLPKT------LKSRLANGET 792
           N     P ++++ +T   K L P  KS  S+D+    + T P +      LKSRL NGET
Sbjct: 35  NFKTLNPNTIITTTTF--KTLTPL-KSSTSSDVDPTSSSTTPISAASSFSLKSRLRNGET 91

Query: 791 LYGLFLLSFSPTLAEIAGLAGYDFVVVDMEHGPGGISDALPCLHALAATGTPAILRLPES 612
           LYG+FLLSFSPTLAEI+GLAGYDF VVDMEHGPGGI++AL CL ALA+T TPAI+RLPE+
Sbjct: 92  LYGIFLLSFSPTLAEISGLAGYDFAVVDMEHGPGGITEALNCLRALASTQTPAIIRLPET 151

Query: 611 TAAWAKKALDIGPQGIMFPMIESSKSAKKAVSFCRFPPGGVRGSAHTLVRASNYGINDGY 432
              WAKKALD+GPQGIMFPM+ES K AKKAVS+CRFPP G+RGSAHT+VRAS+YGI++GY
Sbjct: 152 CPTWAKKALDLGPQGIMFPMVESPKMAKKAVSYCRFPPEGIRGSAHTVVRASSYGIDEGY 211

Query: 431 LANYEEELLIMCQVESEEGVKKIEEIAAVDGVDCIQMGPLDLSASLGYLWDPGNKKVRQV 252
           L+NY +ELLIMCQVESEEGVKK +EIAAVDGVDCIQMGPLDLSAS+GYLWDPG+KKVR++
Sbjct: 212 LSNYGDELLIMCQVESEEGVKKADEIAAVDGVDCIQMGPLDLSASMGYLWDPGHKKVREM 271

Query: 251 VREAEKGVL-EKKNGGGAYLGGFAMPHDGAEQLRMRGYHMVSGAVDLGLFRSAVVEDVKR 75
           +R AEK VL  KK GGGAYL GF+MPHDG   L+ RGY+MV+G VD+GLFRSA V+DVK+
Sbjct: 272 MRAAEKAVLGSKKGGGGAYLAGFSMPHDGPIDLKSRGYNMVAGTVDVGLFRSAAVDDVKK 331

Query: 74  FKMNLMNGSXXXXXXXXXXXXKYW 3
           FKM+L+ GS            KYW
Sbjct: 332 FKMSLVQGSDDEEEHDKDADEKYW 355


>ref|XP_004146130.1| PREDICTED: 2-keto-3-deoxy-L-rhamnonate aldolase-like [Cucumis
            sativus] gi|449495022|ref|XP_004159712.1| PREDICTED:
            2-keto-3-deoxy-L-rhamnonate aldolase-like [Cucumis
            sativus]
          Length = 363

 Score =  414 bits (1065), Expect = e-113
 Identities = 218/331 (65%), Positives = 261/331 (78%), Gaps = 26/331 (7%)
 Frame = -2

Query: 962  PYINLPCSEPISL-LSLSTHFSKPLN-----PRSKSIKS---TDLSLPENP--------- 837
            P+I+     PIS  LS ST FSK L+     P+S S ++      S P NP         
Sbjct: 12   PFISSSKLHPISKSLSFSTPFSKSLSFSTPFPKSSSFRTLLPVSSSNPSNPSPIDSSDSF 71

Query: 836  --TLP---KTLKSRLANGETLYGLFLLSFSPTLAEIAGLAGYDFVVVDMEHGPGGISDAL 672
              TLP   +TLKSRL NG+TLYG+FLLSFSP+LAEIAG +GYDFVVVDMEHG GGISDAL
Sbjct: 72   ADTLPAVNRTLKSRLRNGDTLYGIFLLSFSPSLAEIAGFSGYDFVVVDMEHGYGGISDAL 131

Query: 671  PCLHALAATGTPAILRLPESTAAWAKKALDIGPQGIMFPMIESSKSAKKAVSFCRFPPGG 492
            PCLHALAA  TPAILR+PE++A WAKKALD+GPQGIMFPMI+SSK AKKAVS+CRFPP G
Sbjct: 132  PCLHALAAAQTPAILRIPENSATWAKKALDLGPQGIMFPMIDSSKEAKKAVSYCRFPPAG 191

Query: 491  VRGSAHTLVRASNYGINDGYLANYEEELLIMCQVESEEGVKKIEEIAAVDGVDCIQMGPL 312
            VRGSAH +VRAS YGI++GYL NYE+ELLIMCQVESE+ VKKI+EI  VDGVDCIQMGPL
Sbjct: 192  VRGSAHPVVRASKYGIDEGYLTNYEDELLIMCQVESEQAVKKIDEIMEVDGVDCIQMGPL 251

Query: 311  DLSASLGYLWDPGNKKVRQVVREAEKGVLEK--KNG-GGAYLGGFAMPHDGAEQLRMRGY 141
            D+S S+GYLWDPG+KKV++++R+AE  VLE   +NG  G++L GF+MPHDG   ++ RGY
Sbjct: 252  DMSGSMGYLWDPGHKKVKELMRKAEMAVLESQIENGEKGSFLCGFSMPHDGPIDMKRRGY 311

Query: 140  HMVSGAVDLGLFRSAVVEDVKRFKMNLMNGS 48
             M+SGAVDLGLFRSA VEDV++F+M+ M+ S
Sbjct: 312  QMISGAVDLGLFRSAAVEDVRKFRMSEMDSS 342


>ref|XP_002304576.1| predicted protein [Populus trichocarpa] gi|222842008|gb|EEE79555.1|
           predicted protein [Populus trichocarpa]
          Length = 248

 Score =  413 bits (1061), Expect = e-113
 Identities = 201/252 (79%), Positives = 228/252 (90%)
 Frame = -2

Query: 824 TLKSRLANGETLYGLFLLSFSPTLAEIAGLAGYDFVVVDMEHGPGGISDALPCLHALAAT 645
           +LKSRL NGETLYG+FLLSFSPT+AEIAGLAGYDF VVDMEHGPGGI+DAL CL ALAAT
Sbjct: 1   SLKSRLQNGETLYGIFLLSFSPTIAEIAGLAGYDFAVVDMEHGPGGITDALHCLRALAAT 60

Query: 644 GTPAILRLPESTAAWAKKALDIGPQGIMFPMIESSKSAKKAVSFCRFPPGGVRGSAHTLV 465
            TPAILRLPES+  WAKKALD+GPQGIMFPMIES K AKKAVS+CRFPP G+RGSAHT+V
Sbjct: 61  RTPAILRLPESSPTWAKKALDLGPQGIMFPMIESPKMAKKAVSYCRFPPEGIRGSAHTVV 120

Query: 464 RASNYGINDGYLANYEEELLIMCQVESEEGVKKIEEIAAVDGVDCIQMGPLDLSASLGYL 285
           RAS+YGI++GYL+NY EELLIMCQVESEEGVKK EEI+AVDGVDC+QMGPLDLSAS+GYL
Sbjct: 121 RASDYGIDEGYLSNYAEELLIMCQVESEEGVKKAEEISAVDGVDCVQMGPLDLSASMGYL 180

Query: 284 WDPGNKKVRQVVREAEKGVLEKKNGGGAYLGGFAMPHDGAEQLRMRGYHMVSGAVDLGLF 105
           WDPG+KKVR+++R +EKGVL+    GGAYLGGFAMPHDG   L+ RGY MVSG VD+GLF
Sbjct: 181 WDPGHKKVREMMRVSEKGVLK----GGAYLGGFAMPHDGPIDLKARGYRMVSGTVDVGLF 236

Query: 104 RSAVVEDVKRFK 69
           RSA V+DV++FK
Sbjct: 237 RSAAVDDVRKFK 248


>ref|XP_002872535.1| HpcH/HpaI aldolase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297318372|gb|EFH48794.1| HpcH/HpaI aldolase
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 358

 Score =  409 bits (1050), Expect = e-112
 Identities = 199/260 (76%), Positives = 229/260 (88%), Gaps = 1/260 (0%)
 Frame = -2

Query: 824 TLKSRLANGETLYGLFLLSFSPTLAEIAGLAGYDFVVVDMEHGPGGISDALPCLHALAAT 645
           +LKSRL  GETLYGLFLLSFSPTLAEIA  AGYD+VVVDMEHGPGGI +AL C+ AL A 
Sbjct: 79  SLKSRLRGGETLYGLFLLSFSPTLAEIAAHAGYDYVVVDMEHGPGGIPEALDCIRALNAA 138

Query: 644 GTPAILRLPESTAAWAKKALDIGPQGIMFPMIESSKSAKKAVSFCRFPPGGVRGSAHTLV 465
           GT AILRLPE+++ WAKKALD+GPQGIMFPMIES K A KAVS+CRFPP G+RGSAHT+V
Sbjct: 139 GTSAILRLPENSSTWAKKALDLGPQGIMFPMIESRKDATKAVSYCRFPPDGIRGSAHTVV 198

Query: 464 RASNYGINDGYLANYEEELLIMCQVESEEGVKKIEEIAAVDGVDCIQMGPLDLSASLGYL 285
           RASNYGI++GYL+NY EE+LIMCQVES EGVKK +EIAAVDGVDC+QMGPLDLSASLGYL
Sbjct: 199 RASNYGIDEGYLSNYAEEILIMCQVESSEGVKKADEIAAVDGVDCVQMGPLDLSASLGYL 258

Query: 284 WDPGNKKVRQVVREAEKGVLEKKNG-GGAYLGGFAMPHDGAEQLRMRGYHMVSGAVDLGL 108
           WDPG+KKVR+++++AEK VL      GGAYL GFAMPHDGA ++R RGYHMV+GAVD+GL
Sbjct: 259 WDPGHKKVREMMKKAEKSVLTSDPAKGGAYLSGFAMPHDGAVEIRGRGYHMVAGAVDVGL 318

Query: 107 FRSAVVEDVKRFKMNLMNGS 48
           FR+A VEDV+RFKM L+N S
Sbjct: 319 FRNAAVEDVRRFKMGLVNES 338


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