BLASTX nr result

ID: Coptis24_contig00004066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004066
         (1126 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525289.1| PREDICTED: uncharacterized oxidoreductase yk...   444   e-122
ref|XP_004141022.1| PREDICTED: uncharacterized oxidoreductase Yk...   442   e-122
ref|XP_003630708.1| Oxidoreductase, putative [Medicago truncatul...   442   e-122
ref|XP_002324452.1| predicted protein [Populus trichocarpa] gi|2...   440   e-121
ref|XP_003530536.1| PREDICTED: uncharacterized oxidoreductase yk...   439   e-121

>ref|XP_003525289.1| PREDICTED: uncharacterized oxidoreductase ykwC-like [Glycine max]
          Length = 310

 Score =  444 bits (1142), Expect = e-122
 Identities = 228/304 (75%), Positives = 252/304 (82%), Gaps = 1/304 (0%)
 Frame = -3

Query: 1043 MSTTTDLMNPTNTRVGWIGTGVMGRSMCSHLIKAGYPLTIFTRTQSKAQPLIDMGAQFVH 864
            M+     ++P+NTRVGWIGTGVMG+SMC+HLI+AGY LT+F RT SKAQPL+D+GA F  
Sbjct: 1    MAAAEPTISPSNTRVGWIGTGVMGQSMCAHLIRAGYTLTVFNRTPSKAQPLLDLGAYFAP 60

Query: 863  SPSDVAARSDVVFSIVGYPSDVRAVLIGPL-GALNGLREGGILVDMTTSDPSLAVEISSA 687
            SP  VAARSDVVFSIVGYPSDVR+VL+ P  GAL+ LR GG+LVDMTTS+PSLAVEI+ A
Sbjct: 61   SPHAVAARSDVVFSIVGYPSDVRSVLLHPSSGALSALRPGGVLVDMTTSEPSLAVEIADA 120

Query: 686  ADAKNCASVDAPVSGGDRGAKEGTLAIFAGGDELVVRRLEPLFSCLGKVNYMGGPGKGQF 507
            A AK C S+DAPVSGGDRGAK GTLAIFAGG+E  V+R+E LFS LGKVNYMGG GKGQF
Sbjct: 121  ATAKGCHSIDAPVSGGDRGAKNGTLAIFAGGEESTVKRMEALFSHLGKVNYMGGSGKGQF 180

Query: 506  TKLANQITIASTMVGLVEGMVYAHKAGLDVGLYLNAISTGAAGSKSLDLYGSRILGRDFE 327
             KLANQ+TIASTMVGLVEGMVYAHKAGLDVGLYL+AISTGAAGSKSLDLYG RIL RD E
Sbjct: 181  AKLANQVTIASTMVGLVEGMVYAHKAGLDVGLYLDAISTGAAGSKSLDLYGKRILNRDLE 240

Query: 326  AGFYVNHFVKDLGICLKECQNMXXXXXXXXXXXXXXXXXXAHGEGNLGTQALILSLERLN 147
             GF+VNHFVKDLGICLKECQNM                  AHGEGNLGTQALIL LERLN
Sbjct: 241  PGFFVNHFVKDLGICLKECQNMGIALPGLALAQQLYVSLRAHGEGNLGTQALILVLERLN 300

Query: 146  NVSL 135
            NV+L
Sbjct: 301  NVTL 304


>ref|XP_004141022.1| PREDICTED: uncharacterized oxidoreductase YkwC-like [Cucumis sativus]
            gi|449487969|ref|XP_004157891.1| PREDICTED:
            uncharacterized oxidoreductase YkwC-like [Cucumis
            sativus]
          Length = 310

 Score =  442 bits (1138), Expect = e-122
 Identities = 230/309 (74%), Positives = 255/309 (82%), Gaps = 1/309 (0%)
 Frame = -3

Query: 1043 MSTTTDLMNPTNTRVGWIGTGVMGRSMCSHLIKAGYPLTIFTRTQSKAQPLIDMGAQFVH 864
            MST+ D+++P+ TRVGWIGTGVMG SMCSH+IKAGY LT+F RT SKAQPL+D+GA    
Sbjct: 1    MSTSGDIVSPSTTRVGWIGTGVMGCSMCSHIIKAGYKLTVFNRTISKAQPLLDLGANLAT 60

Query: 863  SPSDVAARSDVVFSIVGYPSDVRAVLIGPL-GALNGLREGGILVDMTTSDPSLAVEISSA 687
            SP  VAA+SDVVFSIVGYPSDVR+VL+ P  GAL GLR GG+L+DMTTS+PSLA EI+++
Sbjct: 61   SPLAVAAQSDVVFSIVGYPSDVRSVLLDPSSGALAGLRPGGVLIDMTTSEPSLASEIAAS 120

Query: 686  ADAKNCASVDAPVSGGDRGAKEGTLAIFAGGDELVVRRLEPLFSCLGKVNYMGGPGKGQF 507
            A AK C ++DAPVSGGDRGAK  TLAIFAGGDE  V+RL PLFS LGKVNYMG  GKGQF
Sbjct: 121  ATAKGCGAIDAPVSGGDRGAKNATLAIFAGGDEDEVQRLSPLFSLLGKVNYMGESGKGQF 180

Query: 506  TKLANQITIASTMVGLVEGMVYAHKAGLDVGLYLNAISTGAAGSKSLDLYGSRILGRDFE 327
             KLANQITIASTMVGLVEGM+YA KAGLDVGL+LNAISTGAAGSKSLDLYGSRIL RDFE
Sbjct: 181  AKLANQITIASTMVGLVEGMIYAKKAGLDVGLFLNAISTGAAGSKSLDLYGSRILKRDFE 240

Query: 326  AGFYVNHFVKDLGICLKECQNMXXXXXXXXXXXXXXXXXXAHGEGNLGTQALILSLERLN 147
             GF+VNHFVKDLGICLKECQNM                  A+GEGNLGTQALILSLERLN
Sbjct: 241  PGFFVNHFVKDLGICLKECQNMGLALPGLALAQQLYVSLKAYGEGNLGTQALILSLERLN 300

Query: 146  NVSLESKPS 120
            NVSLE   S
Sbjct: 301  NVSLEGSGS 309


>ref|XP_003630708.1| Oxidoreductase, putative [Medicago truncatula]
            gi|355524730|gb|AET05184.1| Oxidoreductase, putative
            [Medicago truncatula]
          Length = 343

 Score =  442 bits (1137), Expect = e-122
 Identities = 229/307 (74%), Positives = 255/307 (83%), Gaps = 1/307 (0%)
 Frame = -3

Query: 1034 TTDLMNPTNTRVGWIGTGVMGRSMCSHLIKAGYPLTIFTRTQSKAQPLIDMGAQFVHSPS 855
            T++ + P+NTR+GWIGTGVMG+SMC+HLI++GY LT+F RT SKAQPL+D+GA    SP 
Sbjct: 3    TSEPITPSNTRLGWIGTGVMGQSMCAHLIRSGYTLTVFNRTPSKAQPLLDIGATLATSPH 62

Query: 854  DVAARSDVVFSIVGYPSDVRAVLIGP-LGALNGLREGGILVDMTTSDPSLAVEISSAADA 678
             VA++SDVVFSIVGYPSDVR+VL+ P  GAL GL+ GGILVDMTTSDPSLAVEI+ AA  
Sbjct: 63   AVASQSDVVFSIVGYPSDVRSVLLDPNTGALAGLKSGGILVDMTTSDPSLAVEIADAASV 122

Query: 677  KNCASVDAPVSGGDRGAKEGTLAIFAGGDELVVRRLEPLFSCLGKVNYMGGPGKGQFTKL 498
            K+C S+DAPVSGGDRGAK GTLAIFAGGDE +V++L PLFS LGKVNYMG  GKGQF KL
Sbjct: 123  KSCHSIDAPVSGGDRGAKNGTLAIFAGGDESIVKKLSPLFSSLGKVNYMGTSGKGQFVKL 182

Query: 497  ANQITIASTMVGLVEGMVYAHKAGLDVGLYLNAISTGAAGSKSLDLYGSRILGRDFEAGF 318
            ANQITIASTMVGLVEGMVYAHKAGLDVGLYL+AISTGAAGSKSL+LYG RIL RDFEAGF
Sbjct: 183  ANQITIASTMVGLVEGMVYAHKAGLDVGLYLDAISTGAAGSKSLELYGKRILKRDFEAGF 242

Query: 317  YVNHFVKDLGICLKECQNMXXXXXXXXXXXXXXXXXXAHGEGNLGTQALILSLERLNNVS 138
            YVNHFVKDLGICLKEC+ M                  AHGEGNLGTQALIL LERLNNVS
Sbjct: 243  YVNHFVKDLGICLKECEKMGIALPGLALAQQLYVSLKAHGEGNLGTQALILVLERLNNVS 302

Query: 137  LESKPSV 117
            L   PSV
Sbjct: 303  L--PPSV 307


>ref|XP_002324452.1| predicted protein [Populus trichocarpa] gi|222865886|gb|EEF03017.1|
            predicted protein [Populus trichocarpa]
          Length = 315

 Score =  440 bits (1131), Expect = e-121
 Identities = 226/305 (74%), Positives = 254/305 (83%), Gaps = 1/305 (0%)
 Frame = -3

Query: 1040 STTTDLMNPTNTRVGWIGTGVMGRSMCSHLIKAGYPLTIFTRTQSKAQPLIDMGAQFVHS 861
            +T  + ++P+NTRVGWIGTGVMGRSMC HLIKAGY +T+F RT SKAQPLIDMGA+   S
Sbjct: 11   TTNVEPISPSNTRVGWIGTGVMGRSMCGHLIKAGYKVTVFNRTLSKAQPLIDMGARLAQS 70

Query: 860  PSDVAARSDVVFSIVGYPSDVRAVLIGPL-GALNGLREGGILVDMTTSDPSLAVEISSAA 684
            P  VA++SDVVFSIVG+PSDVR+VL+    GAL GLR GG+LVDMTTS+PSLA EIS+AA
Sbjct: 71   PLAVASQSDVVFSIVGFPSDVRSVLLDSTSGALPGLRPGGVLVDMTTSEPSLAAEISAAA 130

Query: 683  DAKNCASVDAPVSGGDRGAKEGTLAIFAGGDELVVRRLEPLFSCLGKVNYMGGPGKGQFT 504
              K+C SVDAPVSGGDRGAK G+LAIFAGGD+ V+ RL PLF+ +G+VNYMG  GKGQF 
Sbjct: 131  TIKDCHSVDAPVSGGDRGAKNGSLAIFAGGDKTVIDRLSPLFALMGRVNYMGATGKGQFA 190

Query: 503  KLANQITIASTMVGLVEGMVYAHKAGLDVGLYLNAISTGAAGSKSLDLYGSRILGRDFEA 324
            KLANQITIASTMVGLVEG++YAHKAGL+V  YLNAISTGAAGSKSLDLYGSRIL RDFEA
Sbjct: 191  KLANQITIASTMVGLVEGIIYAHKAGLNVESYLNAISTGAAGSKSLDLYGSRILKRDFEA 250

Query: 323  GFYVNHFVKDLGICLKECQNMXXXXXXXXXXXXXXXXXXAHGEGNLGTQALILSLERLNN 144
            GFYVNHFVKDLGICLKECQNM                  AHGEGNLGTQALIL+LERLNN
Sbjct: 251  GFYVNHFVKDLGICLKECQNMGLALPGLALAQQLYLSLKAHGEGNLGTQALILALERLNN 310

Query: 143  VSLES 129
            VSLE+
Sbjct: 311  VSLEN 315


>ref|XP_003530536.1| PREDICTED: uncharacterized oxidoreductase ykwC-like [Glycine max]
          Length = 309

 Score =  439 bits (1128), Expect = e-121
 Identities = 224/304 (73%), Positives = 251/304 (82%), Gaps = 1/304 (0%)
 Frame = -3

Query: 1043 MSTTTDLMNPTNTRVGWIGTGVMGRSMCSHLIKAGYPLTIFTRTQSKAQPLIDMGAQFVH 864
            M+    +++ +NTRVGWIGTGVMG+SMC+HLI+AGY LT+F RT SKAQPL+D+GA F  
Sbjct: 1    MAAAEPIISSSNTRVGWIGTGVMGQSMCAHLIRAGYTLTVFNRTPSKAQPLLDLGAHFAP 60

Query: 863  SPSDVAARSDVVFSIVGYPSDVRAVLIGPL-GALNGLREGGILVDMTTSDPSLAVEISSA 687
            SP  VAA SDVVF+IVGYPSDVR+VL+ P  GAL+ LR GG+LVDMTTS+PSLA EI++A
Sbjct: 61   SPHAVAANSDVVFTIVGYPSDVRSVLLHPSSGALSALRPGGVLVDMTTSEPSLATEIAAA 120

Query: 686  ADAKNCASVDAPVSGGDRGAKEGTLAIFAGGDELVVRRLEPLFSCLGKVNYMGGPGKGQF 507
            A AK C S+DAPVSGGDRGAK GTLAIFAGG+E  V+RLEPLFS LGKV YMGG GKGQF
Sbjct: 121  AAAKGCHSIDAPVSGGDRGAKNGTLAIFAGGEEATVKRLEPLFSHLGKVKYMGGSGKGQF 180

Query: 506  TKLANQITIASTMVGLVEGMVYAHKAGLDVGLYLNAISTGAAGSKSLDLYGSRILGRDFE 327
             KLANQ+TIASTMVGLVEGMVYAHKAGLDVGLYL+AISTGAAGSKSLDLYG RIL RD +
Sbjct: 181  AKLANQVTIASTMVGLVEGMVYAHKAGLDVGLYLDAISTGAAGSKSLDLYGKRILNRDLD 240

Query: 326  AGFYVNHFVKDLGICLKECQNMXXXXXXXXXXXXXXXXXXAHGEGNLGTQALILSLERLN 147
             GF+VNHFVKDLGICLKECQNM                  AHGEGNLGTQALIL LERLN
Sbjct: 241  PGFFVNHFVKDLGICLKECQNMGIALPGLALAQQLYVSLRAHGEGNLGTQALILVLERLN 300

Query: 146  NVSL 135
            NV+L
Sbjct: 301  NVTL 304


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