BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004065
         (1374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524578.1| nucleic acid binding protein, putative [Rici...   184   6e-44
ref|XP_002320551.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-43
gb|ACB59355.1| peroxisome biogenesis factor 13 [Nicotiana tabacum]    177   6e-42
ref|XP_003537925.1| PREDICTED: uncharacterized protein LOC100820...   174   4e-41
ref|XP_003543576.1| PREDICTED: uncharacterized protein LOC100775...   174   5e-41

>ref|XP_002524578.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536131|gb|EEF37786.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 313

 Score =  184 bits (466), Expect = 6e-44
 Identities = 84/128 (65%), Positives = 100/128 (78%)
 Frame = +1

Query: 565 PYGEQDXXXXXXXXXXXXXXWLSFLQMMQGVVSFFGRIAILIDQNTQAFHMFMSALLQLF 744
           PYG+QD              W+SFL++MQGVV+FFGRI+ILIDQNTQAFHMFM+A+LQLF
Sbjct: 185 PYGDQDPNNPYGAPSSPPGFWISFLRVMQGVVNFFGRISILIDQNTQAFHMFMTAMLQLF 244

Query: 745 DRSGVLYGELARFALRLLGVRTKPRKVHPRGPEGLPGHHNTPGGQNYIEGPKAAPTGSWE 924
           DR+G+LYGELARF LRLLG++TKPRKV   GP+GLP  HN  G QNYIEGPK AP+G W+
Sbjct: 245 DRTGLLYGELARFVLRLLGIKTKPRKVQGPGPDGLPAPHNPHGNQNYIEGPKGAPSGGWD 304

Query: 925 GVWGDGAA 948
            VWGD  +
Sbjct: 305 NVWGDNGS 312



 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 52/78 (66%), Positives = 59/78 (75%), Gaps = 5/78 (6%)
 Frame = +1

Query: 103 KPWE-GARASSGPAPFKPPTPGSTSDVVEASGTAKPGEVV--AQRNPSVTGA-ALTRPVP 270
           KPWE    +SSGP PFKPPTPGSTSDVVEASGTA+PGE+V  A R  +V     L RPVP
Sbjct: 29  KPWERSGTSSSGPTPFKPPTPGSTSDVVEASGTARPGEIVPAANRTTAVNNTNTLGRPVP 88

Query: 271 SRPWE-QNYGNSYGGVNA 321
           +RPWE Q YG+SYGG N+
Sbjct: 89  TRPWEQQTYGSSYGGYNS 106


>ref|XP_002320551.1| predicted protein [Populus trichocarpa] gi|222861324|gb|EEE98866.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  182 bits (461), Expect = 2e-43
 Identities = 86/128 (67%), Positives = 100/128 (78%)
 Frame = +1

Query: 565 PYGEQDXXXXXXXXXXXXXXWLSFLQMMQGVVSFFGRIAILIDQNTQAFHMFMSALLQLF 744
           P G+QD              W+SFLQ+MQGVV+ FGRI+ LIDQNTQAFHMFMSALLQLF
Sbjct: 10  PCGDQDPNNPFGAPPSPPSFWVSFLQVMQGVVNVFGRISFLIDQNTQAFHMFMSALLQLF 69

Query: 745 DRSGVLYGELARFALRLLGVRTKPRKVHPRGPEGLPGHHNTPGGQNYIEGPKAAPTGSWE 924
           DRSG+LYGELARFALRLLG+++KPRKV   GP+G P  HN  G QNYIEGPKAAP+G+W+
Sbjct: 70  DRSGLLYGELARFALRLLGIKSKPRKVQGPGPDGFPVPHNPRGNQNYIEGPKAAPSGAWD 129

Query: 925 GVWGDGAA 948
            VWGDG +
Sbjct: 130 NVWGDGTS 137


>gb|ACB59355.1| peroxisome biogenesis factor 13 [Nicotiana tabacum]
          Length = 299

 Score =  177 bits (449), Expect = 6e-42
 Identities = 82/126 (65%), Positives = 97/126 (76%)
 Frame = +1

Query: 568 YGEQDXXXXXXXXXXXXXXWLSFLQMMQGVVSFFGRIAILIDQNTQAFHMFMSALLQLFD 747
           +G+QD              W+SF+ +MQGVV+FFGR+A+LIDQNTQAFHM MSA+LQLFD
Sbjct: 173 FGDQDPNNPFGAPSSPPGFWVSFMHVMQGVVTFFGRVAMLIDQNTQAFHMSMSAMLQLFD 232

Query: 748 RSGVLYGELARFALRLLGVRTKPRKVHPRGPEGLPGHHNTPGGQNYIEGPKAAPTGSWEG 927
           RSG+LYGELARF LRLLGV+TKP KVHP GP  LPG H+  G QN+IEGPKAAP+  W+ 
Sbjct: 233 RSGMLYGELARFVLRLLGVKTKPNKVHPPGPGALPGPHHPHGNQNFIEGPKAAPSAGWDN 292

Query: 928 VWGDGA 945
           VWGD A
Sbjct: 293 VWGDNA 298



 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
 Frame = +1

Query: 103 KPWEGARASSGPAPFKPPTPGSTSDVVEASGTAKPGEVV--AQRNPSVTGAALTRPVPSR 276
           KPWE A +SSGP PFKPP+ G+TSDVVEASGTA+PGE+V  A RN +V  + L RPVP R
Sbjct: 16  KPWERAGSSSGPTPFKPPSSGNTSDVVEASGTARPGEIVSTANRNTTVNNSTLARPVPPR 75

Query: 277 PWEQNYGNSYGGVN 318
           PWEQ      GG N
Sbjct: 76  PWEQQQTYGSGGYN 89


>ref|XP_003537925.1| PREDICTED: uncharacterized protein LOC100820349 [Glycine max]
          Length = 280

 Score =  174 bits (442), Expect = 4e-41
 Identities = 82/131 (62%), Positives = 102/131 (77%), Gaps = 2/131 (1%)
 Frame = +1

Query: 565 PYGEQDXXXXXXXXXXXXXXWLSFLQMMQGVVSFFGRIAILIDQNTQAFHMFMSALLQLF 744
           PYG +D              W+SF+++MQGVV+FFGRI++LIDQNTQAFHMFM+ALLQLF
Sbjct: 150 PYGAEDPNNPYGVPSSPPGFWISFMRVMQGVVNFFGRISMLIDQNTQAFHMFMTALLQLF 209

Query: 745 DRSGVLYGELARFALRLLGVRTKPRKVHPRGPEG--LPGHHNTPGGQNYIEGPKAAPTGS 918
           DRSGVLYGELARF LRLLG+RTKP+K++P GP+G  LPG HN+   QN+IEG K AP+GS
Sbjct: 210 DRSGVLYGELARFVLRLLGIRTKPKKINPPGPDGLPLPGQHNSSVNQNFIEGTKPAPSGS 269

Query: 919 WEGVWGDGAAR 951
           W+ VW + A +
Sbjct: 270 WDNVWENDAKK 280



 Score =  100 bits (250), Expect = 7e-19
 Identities = 50/73 (68%), Positives = 59/73 (80%), Gaps = 3/73 (4%)
 Frame = +1

Query: 103 KPWEGARASSGPAPFKPPTPGSTSDVVEASGTAKPGEVV--AQRNPSVTGAALTRPVPSR 276
           KPWE A +SSGPAPFKPP+ GSTSDVVEASGTAKPGE+V  + +  +V   AL RP+P+R
Sbjct: 10  KPWEKAASSSGPAPFKPPSAGSTSDVVEASGTAKPGEIVPASDKTATVNRNALGRPLPTR 69

Query: 277 PWEQNYGN-SYGG 312
           PWEQN G+ SYGG
Sbjct: 70  PWEQNNGSTSYGG 82


>ref|XP_003543576.1| PREDICTED: uncharacterized protein LOC100775500 [Glycine max]
          Length = 301

 Score =  174 bits (441), Expect = 5e-41
 Identities = 85/135 (62%), Positives = 99/135 (73%), Gaps = 8/135 (5%)
 Frame = +1

Query: 565 PYGEQDXXXXXXXXXXXXXXWLSFLQMMQGVVSFFGRIAILIDQNTQAFHMFMSALLQLF 744
           PYGEQD              W+S L++MQGVV+FFGRI+ILIDQNTQAFH+FM+ALLQLF
Sbjct: 165 PYGEQDPNNPYGAPPSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLF 224

Query: 745 DRSGVLYGELARFALRLLGVRTKPRKVHPRGPEGL--------PGHHNTPGGQNYIEGPK 900
           DRSG+LYGELARF LRLLG++TK +KVHP GP G         PG HN  G  NYIE PK
Sbjct: 225 DRSGMLYGELARFVLRLLGIKTKSKKVHPPGPNGQPLPGPGPGPGPHNPSGNVNYIEAPK 284

Query: 901 AAPTGSWEGVWGDGA 945
           AAP+GSW+ VWG+ A
Sbjct: 285 AAPSGSWDNVWGNDA 299



 Score =  105 bits (263), Expect = 2e-20
 Identities = 52/73 (71%), Positives = 60/73 (82%), Gaps = 3/73 (4%)
 Frame = +1

Query: 103 KPWEGARASSGPAPFKPPTPGSTSDVVEASGTAKPGEVV--AQRNPSVTGAALTRPVPSR 276
           KPWE A +SSGPAPFKPP+ G+TSDVVEASGTAKPGE+V  + R+ +V    L RPVP+R
Sbjct: 15  KPWEQAGSSSGPAPFKPPSAGNTSDVVEASGTAKPGEIVSSSDRSAAVNRNTLGRPVPTR 74

Query: 277 PWEQNYGNS-YGG 312
           PWEQNYGNS YGG
Sbjct: 75  PWEQNYGNSTYGG 87