BLASTX nr result
ID: Coptis24_contig00004065
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004065 (1374 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524578.1| nucleic acid binding protein, putative [Rici... 184 6e-44 ref|XP_002320551.1| predicted protein [Populus trichocarpa] gi|2... 182 2e-43 gb|ACB59355.1| peroxisome biogenesis factor 13 [Nicotiana tabacum] 177 6e-42 ref|XP_003537925.1| PREDICTED: uncharacterized protein LOC100820... 174 4e-41 ref|XP_003543576.1| PREDICTED: uncharacterized protein LOC100775... 174 5e-41 >ref|XP_002524578.1| nucleic acid binding protein, putative [Ricinus communis] gi|223536131|gb|EEF37786.1| nucleic acid binding protein, putative [Ricinus communis] Length = 313 Score = 184 bits (466), Expect = 6e-44 Identities = 84/128 (65%), Positives = 100/128 (78%) Frame = +1 Query: 565 PYGEQDXXXXXXXXXXXXXXWLSFLQMMQGVVSFFGRIAILIDQNTQAFHMFMSALLQLF 744 PYG+QD W+SFL++MQGVV+FFGRI+ILIDQNTQAFHMFM+A+LQLF Sbjct: 185 PYGDQDPNNPYGAPSSPPGFWISFLRVMQGVVNFFGRISILIDQNTQAFHMFMTAMLQLF 244 Query: 745 DRSGVLYGELARFALRLLGVRTKPRKVHPRGPEGLPGHHNTPGGQNYIEGPKAAPTGSWE 924 DR+G+LYGELARF LRLLG++TKPRKV GP+GLP HN G QNYIEGPK AP+G W+ Sbjct: 245 DRTGLLYGELARFVLRLLGIKTKPRKVQGPGPDGLPAPHNPHGNQNYIEGPKGAPSGGWD 304 Query: 925 GVWGDGAA 948 VWGD + Sbjct: 305 NVWGDNGS 312 Score = 99.8 bits (247), Expect = 2e-18 Identities = 52/78 (66%), Positives = 59/78 (75%), Gaps = 5/78 (6%) Frame = +1 Query: 103 KPWE-GARASSGPAPFKPPTPGSTSDVVEASGTAKPGEVV--AQRNPSVTGA-ALTRPVP 270 KPWE +SSGP PFKPPTPGSTSDVVEASGTA+PGE+V A R +V L RPVP Sbjct: 29 KPWERSGTSSSGPTPFKPPTPGSTSDVVEASGTARPGEIVPAANRTTAVNNTNTLGRPVP 88 Query: 271 SRPWE-QNYGNSYGGVNA 321 +RPWE Q YG+SYGG N+ Sbjct: 89 TRPWEQQTYGSSYGGYNS 106 >ref|XP_002320551.1| predicted protein [Populus trichocarpa] gi|222861324|gb|EEE98866.1| predicted protein [Populus trichocarpa] Length = 138 Score = 182 bits (461), Expect = 2e-43 Identities = 86/128 (67%), Positives = 100/128 (78%) Frame = +1 Query: 565 PYGEQDXXXXXXXXXXXXXXWLSFLQMMQGVVSFFGRIAILIDQNTQAFHMFMSALLQLF 744 P G+QD W+SFLQ+MQGVV+ FGRI+ LIDQNTQAFHMFMSALLQLF Sbjct: 10 PCGDQDPNNPFGAPPSPPSFWVSFLQVMQGVVNVFGRISFLIDQNTQAFHMFMSALLQLF 69 Query: 745 DRSGVLYGELARFALRLLGVRTKPRKVHPRGPEGLPGHHNTPGGQNYIEGPKAAPTGSWE 924 DRSG+LYGELARFALRLLG+++KPRKV GP+G P HN G QNYIEGPKAAP+G+W+ Sbjct: 70 DRSGLLYGELARFALRLLGIKSKPRKVQGPGPDGFPVPHNPRGNQNYIEGPKAAPSGAWD 129 Query: 925 GVWGDGAA 948 VWGDG + Sbjct: 130 NVWGDGTS 137 >gb|ACB59355.1| peroxisome biogenesis factor 13 [Nicotiana tabacum] Length = 299 Score = 177 bits (449), Expect = 6e-42 Identities = 82/126 (65%), Positives = 97/126 (76%) Frame = +1 Query: 568 YGEQDXXXXXXXXXXXXXXWLSFLQMMQGVVSFFGRIAILIDQNTQAFHMFMSALLQLFD 747 +G+QD W+SF+ +MQGVV+FFGR+A+LIDQNTQAFHM MSA+LQLFD Sbjct: 173 FGDQDPNNPFGAPSSPPGFWVSFMHVMQGVVTFFGRVAMLIDQNTQAFHMSMSAMLQLFD 232 Query: 748 RSGVLYGELARFALRLLGVRTKPRKVHPRGPEGLPGHHNTPGGQNYIEGPKAAPTGSWEG 927 RSG+LYGELARF LRLLGV+TKP KVHP GP LPG H+ G QN+IEGPKAAP+ W+ Sbjct: 233 RSGMLYGELARFVLRLLGVKTKPNKVHPPGPGALPGPHHPHGNQNFIEGPKAAPSAGWDN 292 Query: 928 VWGDGA 945 VWGD A Sbjct: 293 VWGDNA 298 Score = 98.2 bits (243), Expect = 4e-18 Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 2/74 (2%) Frame = +1 Query: 103 KPWEGARASSGPAPFKPPTPGSTSDVVEASGTAKPGEVV--AQRNPSVTGAALTRPVPSR 276 KPWE A +SSGP PFKPP+ G+TSDVVEASGTA+PGE+V A RN +V + L RPVP R Sbjct: 16 KPWERAGSSSGPTPFKPPSSGNTSDVVEASGTARPGEIVSTANRNTTVNNSTLARPVPPR 75 Query: 277 PWEQNYGNSYGGVN 318 PWEQ GG N Sbjct: 76 PWEQQQTYGSGGYN 89 >ref|XP_003537925.1| PREDICTED: uncharacterized protein LOC100820349 [Glycine max] Length = 280 Score = 174 bits (442), Expect = 4e-41 Identities = 82/131 (62%), Positives = 102/131 (77%), Gaps = 2/131 (1%) Frame = +1 Query: 565 PYGEQDXXXXXXXXXXXXXXWLSFLQMMQGVVSFFGRIAILIDQNTQAFHMFMSALLQLF 744 PYG +D W+SF+++MQGVV+FFGRI++LIDQNTQAFHMFM+ALLQLF Sbjct: 150 PYGAEDPNNPYGVPSSPPGFWISFMRVMQGVVNFFGRISMLIDQNTQAFHMFMTALLQLF 209 Query: 745 DRSGVLYGELARFALRLLGVRTKPRKVHPRGPEG--LPGHHNTPGGQNYIEGPKAAPTGS 918 DRSGVLYGELARF LRLLG+RTKP+K++P GP+G LPG HN+ QN+IEG K AP+GS Sbjct: 210 DRSGVLYGELARFVLRLLGIRTKPKKINPPGPDGLPLPGQHNSSVNQNFIEGTKPAPSGS 269 Query: 919 WEGVWGDGAAR 951 W+ VW + A + Sbjct: 270 WDNVWENDAKK 280 Score = 100 bits (250), Expect = 7e-19 Identities = 50/73 (68%), Positives = 59/73 (80%), Gaps = 3/73 (4%) Frame = +1 Query: 103 KPWEGARASSGPAPFKPPTPGSTSDVVEASGTAKPGEVV--AQRNPSVTGAALTRPVPSR 276 KPWE A +SSGPAPFKPP+ GSTSDVVEASGTAKPGE+V + + +V AL RP+P+R Sbjct: 10 KPWEKAASSSGPAPFKPPSAGSTSDVVEASGTAKPGEIVPASDKTATVNRNALGRPLPTR 69 Query: 277 PWEQNYGN-SYGG 312 PWEQN G+ SYGG Sbjct: 70 PWEQNNGSTSYGG 82 >ref|XP_003543576.1| PREDICTED: uncharacterized protein LOC100775500 [Glycine max] Length = 301 Score = 174 bits (441), Expect = 5e-41 Identities = 85/135 (62%), Positives = 99/135 (73%), Gaps = 8/135 (5%) Frame = +1 Query: 565 PYGEQDXXXXXXXXXXXXXXWLSFLQMMQGVVSFFGRIAILIDQNTQAFHMFMSALLQLF 744 PYGEQD W+S L++MQGVV+FFGRI+ILIDQNTQAFH+FM+ALLQLF Sbjct: 165 PYGEQDPNNPYGAPPSPPGFWISALRVMQGVVNFFGRISILIDQNTQAFHLFMTALLQLF 224 Query: 745 DRSGVLYGELARFALRLLGVRTKPRKVHPRGPEGL--------PGHHNTPGGQNYIEGPK 900 DRSG+LYGELARF LRLLG++TK +KVHP GP G PG HN G NYIE PK Sbjct: 225 DRSGMLYGELARFVLRLLGIKTKSKKVHPPGPNGQPLPGPGPGPGPHNPSGNVNYIEAPK 284 Query: 901 AAPTGSWEGVWGDGA 945 AAP+GSW+ VWG+ A Sbjct: 285 AAPSGSWDNVWGNDA 299 Score = 105 bits (263), Expect = 2e-20 Identities = 52/73 (71%), Positives = 60/73 (82%), Gaps = 3/73 (4%) Frame = +1 Query: 103 KPWEGARASSGPAPFKPPTPGSTSDVVEASGTAKPGEVV--AQRNPSVTGAALTRPVPSR 276 KPWE A +SSGPAPFKPP+ G+TSDVVEASGTAKPGE+V + R+ +V L RPVP+R Sbjct: 15 KPWEQAGSSSGPAPFKPPSAGNTSDVVEASGTAKPGEIVSSSDRSAAVNRNTLGRPVPTR 74 Query: 277 PWEQNYGNS-YGG 312 PWEQNYGNS YGG Sbjct: 75 PWEQNYGNSTYGG 87