BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004062
         (1749 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80689.1| hypothetical protein VITISV_005501 [Vitis vinifera]   447   e-123
ref|XP_002285171.1| PREDICTED: double-stranded RNA-binding prote...   446   e-123
ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycin...   420   e-115
ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding prote...   420   e-115
ref|XP_004139447.1| PREDICTED: double-stranded RNA-binding prote...   419   e-115

>emb|CAN80689.1| hypothetical protein VITISV_005501 [Vitis vinifera]
          Length = 403

 Score =  447 bits (1149), Expect = e-123
 Identities = 251/427 (58%), Positives = 286/427 (66%), Gaps = 11/427 (2%)
 Frame = -1

Query: 1704 MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKATVNFNGEVFESPQFCTTLRQAEHSA 1525
            MYKNQLQELAQRSCFNLPSY+CIREGPDHAPRFKATVNFNGE+FESP +CTTLRQAEHSA
Sbjct: 1    MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPNYCTTLRQAEHSA 60

Query: 1524 AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEVSQRVGAALPQYTTVRSGLGHLPVFT 1345
            AEVALNSLSNRGPSHSLAARILDETGVYKNLLQE++QRVGA LPQYTT RSGLGHLPVFT
Sbjct: 61   AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 1344 CTVELAGITFTGEHXXXXXXXXXXXXXXAWSSLKQLAKXXXXXXXXXXXXXXXXQVTIAR 1165
             TVELAGITFTGE               AWSSLKQLAK                Q+TIAR
Sbjct: 121  GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKEAASSSSETENNDELEQITIAR 180

Query: 1164 ALLNYRLKEKMAMANYPNALSPFPKRFPMQHQRPSSAQPPPLTTSKILPLIRPKSVPRNR 985
            ALLNYRLKEKMA+AN P+    FPK+FP+Q+ R  S Q PP+ TSKILPLI  K+ PRNR
Sbjct: 181  ALLNYRLKEKMAIANSPSGTLSFPKKFPIQNSRLFSPQLPPVATSKILPLICQKTPPRNR 240

Query: 984  -PVVTVNHDSAQ---------PSRYVPPENRGIRPQKFPAVNATPYVPIRHFRAPYHGVA 835
             P  T N D  Q         PS+ +  + R +RPQ+FPA  A PYVPIR FR PYHG+A
Sbjct: 241  PPSPTANDDPRQQHQVKNPVPPSQPLALDVRAVRPQRFPAAGAVPYVPIRQFRTPYHGIA 300

Query: 834  PPVTMRTAVPVFSAPLFQSPANQPSHEMASSVRHVTPSVHIRQAVPVFSAPPIKVEKLQL 655
            PPVT+R AVPVFSAP    P+  P   + +    + P V +RQAVPVF+APP++ E    
Sbjct: 301  PPVTIRNAVPVFSAP----PSGLPPQVIRAPHMRIAPPVCVRQAVPVFAAPPVRKED--- 353

Query: 654  VTIPPEAESRVQMEATGNVPLVAAPQVCVEEPPALSVPQLP-KSAFPIEESSNYLQEPVT 478
                               PLV    V  E+P A S+P LP KS   +EE+ +     + 
Sbjct: 354  -------------------PLV----VRKEDPSAASLPSLPTKSPAHVEETGSATANDLQ 390

Query: 477  RAQVVSS 457
              + V S
Sbjct: 391  EFEAVKS 397


>ref|XP_002285171.1| PREDICTED: double-stranded RNA-binding protein 2-like [Vitis
            vinifera]
          Length = 413

 Score =  446 bits (1147), Expect = e-123
 Identities = 251/437 (57%), Positives = 285/437 (65%), Gaps = 21/437 (4%)
 Frame = -1

Query: 1704 MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKATVNFNGEVFESPQFCTTLRQAEHSA 1525
            MYKNQLQELAQRSCFNLPSY+CIREGPDHAPRFKATVNFNGE+FESP +CTTLRQAEHSA
Sbjct: 1    MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPNYCTTLRQAEHSA 60

Query: 1524 AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEVSQRVGAALPQYTTVRSGLGHLPVFT 1345
            AEVALNSLSNRGPSHSLAARILDETGVYKNLLQE++QRVGA LPQYTT RSGLGHLPVFT
Sbjct: 61   AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 1344 CTVELAGITFTGEHXXXXXXXXXXXXXXAWSSLKQLAKXXXXXXXXXXXXXXXXQVTIAR 1165
             TVELAGITFTGE               AWSSLKQLAK                Q+TIAR
Sbjct: 121  GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKEAANSSSETENNDELEQITIAR 180

Query: 1164 ALLNYRLKEKMAMANYPNALSPFPKRFPMQHQRPSSAQPPPLTTSKILPLIRPKSVPRNR 985
            ALLNYRLKEKMA+AN P+    FPK+FP+Q+ R  S Q PP+ TSKILPLI  K+ PRNR
Sbjct: 181  ALLNYRLKEKMAIANSPSGTLSFPKKFPIQNSRLFSPQLPPVATSKILPLICQKTPPRNR 240

Query: 984  PVVTVNHDSAQPSRY--------------VPPEN------RGIRPQKFPAVNATPYVPIR 865
            P     +D + PS                VPP        R +RPQ+FPA  A PYVPIR
Sbjct: 241  PPSPTANDGSMPSSQPRSRPTSTTSSENPVPPSQPLALDVRAVRPQRFPAAGAVPYVPIR 300

Query: 864  HFRAPYHGVAPPVTMRTAVPVFSAPLFQSPANQPSHEMASSVRHVTPSVHIRQAVPVFSA 685
             FR PYHG+APPVT+R AVPVFSAP    P+  P   + +    + P V +RQAVPVF+A
Sbjct: 301  QFRTPYHGIAPPVTIRNAVPVFSAP----PSGLPPQVIRAPHMRIAPPVCVRQAVPVFAA 356

Query: 684  PPIKVEKLQLVTIPPEAESRVQMEATGNVPLVAAPQVCVEEPPALSVPQLP-KSAFPIEE 508
            PP++ E                       PLV    V  E+P A S+P LP KS   +EE
Sbjct: 357  PPVRKED----------------------PLV----VRKEDPSAASLPSLPTKSPAHVEE 390

Query: 507  SSNYLQEPVTRAQVVSS 457
            + +     +   + V S
Sbjct: 391  TGSATANDLQEFEAVKS 407


>ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycine max]
            gi|255644888|gb|ACU22944.1| unknown [Glycine max]
          Length = 401

 Score =  420 bits (1080), Expect = e-115
 Identities = 234/364 (64%), Positives = 263/364 (72%), Gaps = 8/364 (2%)
 Frame = -1

Query: 1704 MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKATVNFNGEVFESPQFCTTLRQAEHSA 1525
            MYKNQLQELAQRSCFNLPSY+CIREGPDHAPRFKATVNFNGE+FESP +C+TLRQAEHSA
Sbjct: 1    MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 1524 AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEVSQRVGAALPQYTTVRSGLGHLPVFT 1345
            AEVALNSLSNR PSHSLAARILDETGVYKNLLQE++QRVGA LPQY T RSGLGHLPVFT
Sbjct: 61   AEVALNSLSNRAPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYFTFRSGLGHLPVFT 120

Query: 1344 CTVELAGITFTGEHXXXXXXXXXXXXXXAWSSLKQLAKXXXXXXXXXXXXXXXXQVTIAR 1165
             TVELAGI FTGE               AWSSLKQLAK                Q+TIAR
Sbjct: 121  GTVELAGIMFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETARSSTEPENNDELEQITIAR 180

Query: 1164 ALLNYRLKEKMAMANYPNALSPFPKRFPMQHQRPSSAQPPPLTTSKILPLIRPKSVPRNR 985
            ALLNYRLKEK++M+N  NA  PFPK+F +Q+ RP+S QPPP  TSKILPLI  K+ PR+R
Sbjct: 181  ALLNYRLKEKISMSN-SNAPVPFPKKFQIQNPRPTSPQPPPAATSKILPLICQKAAPRSR 239

Query: 984  PVVTVN------HDSAQPSRYVPPENRGIRPQKFPAVNATPYVPIRHFRAPYHGVAPPVT 823
             +V  +       +SA P     PE+RGIR  KFPA  A PYVPIR  R P  G+APPVT
Sbjct: 240  HLVGASPARASCDNSAMPQLSATPESRGIRRPKFPAAGAAPYVPIRQMR-PCQGMAPPVT 298

Query: 822  MRTAVPVFSAPLFQSPANQPSHEM--ASSVRHVTPSVHIRQAVPVFSAPPIKVEKLQLVT 649
            +RTA+PVFS P     A   SH++  A  VR V P V IRQAVPVF+ PP  + K + V 
Sbjct: 299  IRTAIPVFSPP---PAAAAVSHQVLRAPHVR-VAPPVTIRQAVPVFATPPPPIRKDEPVP 354

Query: 648  IPPE 637
            IP +
Sbjct: 355  IPKD 358


>ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 411

 Score =  420 bits (1079), Expect = e-115
 Identities = 233/383 (60%), Positives = 266/383 (69%), Gaps = 6/383 (1%)
 Frame = -1

Query: 1704 MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKATVNFNGEVFESPQFCTTLRQAEHSA 1525
            MYKNQLQELAQRSCFNLPSY+CIREGPDHAPRFKATVNFNGE+FESP +C+TLRQAEHSA
Sbjct: 1    MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 1524 AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEVSQRVGAALPQYTTVRSGLGHLPVFT 1345
            AEVALNSLSNR PSHSLAARILDETGVYKNLLQE++QRVGA LPQY T RSGLGHLPVFT
Sbjct: 61   AEVALNSLSNRAPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYFTFRSGLGHLPVFT 120

Query: 1344 CTVELAGITFTGEHXXXXXXXXXXXXXXAWSSLKQLAKXXXXXXXXXXXXXXXXQVTIAR 1165
             TVELAGI FTGE               AWSSLKQLAK                Q+TIAR
Sbjct: 121  GTVELAGIMFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETARSSTEPENNDELEQITIAR 180

Query: 1164 ALLNYRLKEKMAMANYPNALSPFPKRFPMQHQRPSSAQPPPLTTSKILPLIRPKSVPRNR 985
            ALLNYRLKEK++M+N  NA  PFPK+F +Q+ RP+S QPPP TTSKILPLI  K   R+R
Sbjct: 181  ALLNYRLKEKISMSN-SNAPVPFPKKFQIQNPRPTSPQPPPATTSKILPLICQKGAHRSR 239

Query: 984  ------PVVTVNHDSAQPSRYVPPENRGIRPQKFPAVNATPYVPIRHFRAPYHGVAPPVT 823
                  P    + +S  P     P++RGIR  KFPA  A PYVPIR  R P  G+APPVT
Sbjct: 240  HLVAASPAPASSDNSVMPQLPATPDSRGIRRPKFPAAGAAPYVPIRQMR-PCQGMAPPVT 298

Query: 822  MRTAVPVFSAPLFQSPANQPSHEMASSVRHVTPSVHIRQAVPVFSAPPIKVEKLQLVTIP 643
            +RTA+PVFS P   + A      + +    V P V IRQAVPVF+APP  V K + V IP
Sbjct: 299  IRTAIPVFSPPPPPAAAAVSHQVLRAPHVRVAPPVTIRQAVPVFAAPPPPVRKDEPVPIP 358

Query: 642  PEAESRVQMEATGNVPLVAAPQV 574
             +    V  +   + P ++AP +
Sbjct: 359  KDEPVAVPKD---DSPTISAPSL 378


>ref|XP_004139447.1| PREDICTED: double-stranded RNA-binding protein 2-like [Cucumis
            sativus]
          Length = 414

 Score =  419 bits (1078), Expect = e-115
 Identities = 231/390 (59%), Positives = 267/390 (68%), Gaps = 2/390 (0%)
 Frame = -1

Query: 1704 MYKNQLQELAQRSCFNLPSYSCIREGPDHAPRFKATVNFNGEVFESPQFCTTLRQAEHSA 1525
            MYKNQLQELAQRSCFNLPSY+CIREGPDHAPRFKATVNFNGE+FE PQ+C+TLRQAEHSA
Sbjct: 1    MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 1524 AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEVSQRVGAALPQYTTVRSGLGHLPVFT 1345
            AEVALN+LSNRGP HSLAARILDETGVYKNLLQE++QRVGA LPQYTT RSGLGHLPVFT
Sbjct: 61   AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 1344 CTVELAGITFTGEHXXXXXXXXXXXXXXAWSSLKQLAKXXXXXXXXXXXXXXXXQVTIAR 1165
              VELAGITFTGE               AWS+LKQLAK                Q+TIAR
Sbjct: 121  GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 1164 ALLNYRLKEKMAMANYPNALSPFPKRFPMQHQRPSSAQPPPLTTSKILPLIRPKSVPRNR 985
            ALLNYR KEK+AM+N PNA  PF K+  +Q  RP+S Q PP  TSKILPLI  K+ PR+R
Sbjct: 181  ALLNYRQKEKLAMSN-PNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSR 239

Query: 984  PVVTVNHDSAQPSRYVPPENRGIRPQKFPAVNATPYVPIRHFRAPYHGVAPPVTMRTAVP 805
               + N      S+    E  G RPQKF A  A  Y+P++ FR   HG+APPVT+RTA+P
Sbjct: 240  APFSANKIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMP 299

Query: 804  VFSAPLFQSPANQPSHEM--ASSVRHVTPSVHIRQAVPVFSAPPIKVEKLQLVTIPPEAE 631
            VFSAP    P+  P  ++     +R + P V IRQA+PVF+APP++ E       PP  +
Sbjct: 300  VFSAPPLPQPSKLPPQQVIRVPPIR-IAPPVSIRQAIPVFAAPPVRKEN------PPVVK 352

Query: 630  SRVQMEATGNVPLVAAPQVCVEEPPALSVP 541
                       P  AAP+   E+PPALS P
Sbjct: 353  KE-------ECPAPAAPK---EDPPALSAP 372