BLASTX nr result

ID: Coptis24_contig00004058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004058
         (1249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324179.1| predicted protein [Populus trichocarpa] gi|2...   288   3e-75
emb|CBI15138.3| unnamed protein product [Vitis vinifera]              283   8e-74
ref|XP_002281074.1| PREDICTED: uncharacterized protein LOC100251...   283   8e-74
emb|CBI15137.3| unnamed protein product [Vitis vinifera]              275   1e-71
ref|XP_002514669.1| conserved hypothetical protein [Ricinus comm...   272   1e-70

>ref|XP_002324179.1| predicted protein [Populus trichocarpa] gi|222865613|gb|EEF02744.1|
           predicted protein [Populus trichocarpa]
          Length = 298

 Score =  288 bits (736), Expect = 3e-75
 Identities = 147/285 (51%), Positives = 192/285 (67%)
 Frame = +2

Query: 98  RLWRPAAQRNLKNQWLKLVSHKQKWVSASSNGRSHATSLVNSYLSIRYLPLMELGVLSDM 277
           RLWRPA QRNL+NQW KL S++ +WVS+SS GRSHATSLVN+YLS+RY+P MELGVLSDM
Sbjct: 29  RLWRPATQRNLRNQWSKLASYRLQWVSSSSTGRSHATSLVNTYLSLRYIPSMELGVLSDM 88

Query: 278 RNIKEMASFKLAQQQETYTKKLISSYKDMXXXXXXXXXXXXXXXXXXXXXXXXXSMRCFM 457
            ++++ AS KL +QQE Y +KL+SSY+D+                         SMRC++
Sbjct: 89  LDLRKKASSKLLKQQELYRRKLLSSYRDL-------------VAVVTYMVNTSRSMRCYV 135

Query: 458 KGPIGSPLMQYSSHSEDNRNDLGDGGGIPVFTFWSVPYHEKLAQEFVKMFASXXXXXXXX 637
           KG   SPL+Q+S  SED +ND GDGGGIPVF FWS+   E+LA E V MF S        
Sbjct: 136 KGTSSSPLVQFSCSSED-KNDAGDGGGIPVFAFWSISSFEQLADELVLMFISELSLKRAL 194

Query: 638 XXXXFSITGEKQKTEKISWADELYQGEFEDLISSGLYCEETCQPLPPRIYDQESDFPVTV 817
               F+I+ E  +  +  W +ELY GEF+DL    L+ E+TC P+PPR+ + +SD P  +
Sbjct: 195 VVELFTISCEALEVNEFCWLNELYPGEFDDLRKCNLFSEDTCGPVPPRLMEGKSDMP-PL 253

Query: 818 RSNNRPDHEVLQVYLTTWLVEVNIETHRVEETLTTVGEEMHVSLS 952
           + N++P+HE LQVYLTTWL E+NI+THRV+E    + EEMHV LS
Sbjct: 254 KFNSQPNHENLQVYLTTWLEELNIDTHRVDEMFAILEEEMHVRLS 298


>emb|CBI15138.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score =  283 bits (723), Expect = 8e-74
 Identities = 149/285 (52%), Positives = 187/285 (65%), Gaps = 1/285 (0%)
 Frame = +2

Query: 98  RLWRPAAQRNLKNQWLKLVSHKQKWVSASSNGRSHATSLVNSYLSIRYLPLMELGVLSDM 277
           RLWRPAAQRNL+NQW KL S++Q+W S +S GRSHAT LVN+YLS+RY+P MELGVLSDM
Sbjct: 33  RLWRPAAQRNLRNQWSKLASYRQQWTSTASKGRSHATDLVNAYLSLRYMPAMELGVLSDM 92

Query: 278 RNIKEMASFKLAQQQETYTKKLISSYKDMXXXXXXXXXXXXXXXXXXXXXXXXXSMRCFM 457
            NI++ A  KL +QQ  +  KL+S+YKDM                         SMRCF+
Sbjct: 93  PNIRKKACMKLLKQQGLHGSKLLSAYKDM-------------VAVVTHMVNTSRSMRCFL 139

Query: 458 KGPIGSPLMQYSSHSEDNRNDLGDGGGIPVFTFWSVPYHEKLAQEFVKMFASXXXXXXXX 637
           KG   SPL+Q+SS SED  NDLGDGGG P F FW +   EKLA+E V+MF          
Sbjct: 140 KGTSSSPLVQFSSLSEDT-NDLGDGGGTPAFLFWPISSFEKLAEELVQMFILELNLKRLL 198

Query: 638 XXXXFSITGEK-QKTEKISWADELYQGEFEDLISSGLYCEETCQPLPPRIYDQESDFPVT 814
                SI+ E+  + ++  W+DELY GEF+DL    L+ +E  + +PP+I   ES  PV 
Sbjct: 199 VVELLSISCEEAPQDDRYCWSDELYPGEFDDLGICSLHSKEIGELIPPKIIGFESHSPV- 257

Query: 815 VRSNNRPDHEVLQVYLTTWLVEVNIETHRVEETLTTVGEEMHVSL 949
           +RSN +PDHE+LQVYLTTWL EVNI+THRV+E    +GEEMHV L
Sbjct: 258 IRSNQQPDHEILQVYLTTWLAEVNIDTHRVDEIFAVIGEEMHVGL 302


>ref|XP_002281074.1| PREDICTED: uncharacterized protein LOC100251942 [Vitis vinifera]
          Length = 341

 Score =  283 bits (723), Expect = 8e-74
 Identities = 149/285 (52%), Positives = 187/285 (65%), Gaps = 1/285 (0%)
 Frame = +2

Query: 98  RLWRPAAQRNLKNQWLKLVSHKQKWVSASSNGRSHATSLVNSYLSIRYLPLMELGVLSDM 277
           RLWRPAAQRNL+NQW KL S++Q+W S +S GRSHAT LVN+YLS+RY+P MELGVLSDM
Sbjct: 71  RLWRPAAQRNLRNQWSKLASYRQQWTSTASKGRSHATDLVNAYLSLRYMPAMELGVLSDM 130

Query: 278 RNIKEMASFKLAQQQETYTKKLISSYKDMXXXXXXXXXXXXXXXXXXXXXXXXXSMRCFM 457
            NI++ A  KL +QQ  +  KL+S+YKDM                         SMRCF+
Sbjct: 131 PNIRKKACMKLLKQQGLHGSKLLSAYKDM-------------VAVVTHMVNTSRSMRCFL 177

Query: 458 KGPIGSPLMQYSSHSEDNRNDLGDGGGIPVFTFWSVPYHEKLAQEFVKMFASXXXXXXXX 637
           KG   SPL+Q+SS SED  NDLGDGGG P F FW +   EKLA+E V+MF          
Sbjct: 178 KGTSSSPLVQFSSLSEDT-NDLGDGGGTPAFLFWPISSFEKLAEELVQMFILELNLKRLL 236

Query: 638 XXXXFSITGEK-QKTEKISWADELYQGEFEDLISSGLYCEETCQPLPPRIYDQESDFPVT 814
                SI+ E+  + ++  W+DELY GEF+DL    L+ +E  + +PP+I   ES  PV 
Sbjct: 237 VVELLSISCEEAPQDDRYCWSDELYPGEFDDLGICSLHSKEIGELIPPKIIGFESHSPV- 295

Query: 815 VRSNNRPDHEVLQVYLTTWLVEVNIETHRVEETLTTVGEEMHVSL 949
           +RSN +PDHE+LQVYLTTWL EVNI+THRV+E    +GEEMHV L
Sbjct: 296 IRSNQQPDHEILQVYLTTWLAEVNIDTHRVDEIFAVIGEEMHVGL 340


>emb|CBI15137.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score =  275 bits (704), Expect = 1e-71
 Identities = 147/285 (51%), Positives = 184/285 (64%), Gaps = 1/285 (0%)
 Frame = +2

Query: 101 LWRPAAQRNLKNQWLKLVSHKQKWVSASSNGRSHATSLVNSYLSIRYLPLMELGVLSDMR 280
           LWRPAAQRNL+NQW KL S++Q+W S +S GRSHAT LVNSYLS RY+P MELGVLSDM 
Sbjct: 34  LWRPAAQRNLRNQWSKLASYRQQWTSTASKGRSHATDLVNSYLSQRYMPAMELGVLSDMP 93

Query: 281 NIKEMASFKLAQQQETYTKKLISSYKDMXXXXXXXXXXXXXXXXXXXXXXXXXSMRCFMK 460
           NI++ A  KL +QQ  +  KL+S+YKDM                         SMRCF+K
Sbjct: 94  NIRKKACMKLLKQQGLHGSKLLSAYKDM-------------VAVVTHMVNTSRSMRCFLK 140

Query: 461 GPIGSPLMQYSSHSEDNRNDLGDGGGIPVFTFWSVPYHEKLAQEFVKMFASXXXXXXXXX 640
           G   SPL+Q+SS SED  NDLGDGGG P F FW +   EKLA+E V+MF           
Sbjct: 141 GTSSSPLVQFSSLSEDT-NDLGDGGGTPAFLFWPISSFEKLAEELVQMFILELNLKRLLV 199

Query: 641 XXXFSITGEK-QKTEKISWADELYQGEFEDLISSGLYCEETCQPLPPRIYDQESDFPVTV 817
               SI+ E+  + ++  W+DELY GEF+D     L+ +E  + +PP+I   ES   + +
Sbjct: 200 VELHSISCEEAPQKDRYCWSDELYPGEFDDWGICSLHSKEIGELIPPKIIGFES-HSLVI 258

Query: 818 RSNNRPDHEVLQVYLTTWLVEVNIETHRVEETLTTVGEEMHVSLS 952
           RSN +PDHE+LQVYLTTWL EVNI+THRV+E    +GEEMHV LS
Sbjct: 259 RSNQQPDHEILQVYLTTWLAEVNIDTHRVDEIFAVIGEEMHVGLS 303


>ref|XP_002514669.1| conserved hypothetical protein [Ricinus communis]
           gi|223546273|gb|EEF47775.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score =  272 bits (696), Expect = 1e-70
 Identities = 139/285 (48%), Positives = 188/285 (65%)
 Frame = +2

Query: 98  RLWRPAAQRNLKNQWLKLVSHKQKWVSASSNGRSHATSLVNSYLSIRYLPLMELGVLSDM 277
           RLWRPAAQRNL+NQW KL S + +W S SS  RSHATSLVN++LS +Y+P MELG+L++M
Sbjct: 16  RLWRPAAQRNLRNQWSKLASCRSEWFSCSSAARSHATSLVNAFLSQKYVPSMELGILNEM 75

Query: 278 RNIKEMASFKLAQQQETYTKKLISSYKDMXXXXXXXXXXXXXXXXXXXXXXXXXSMRCFM 457
            +I+  A  KL +QQE + +KL+SSYKDM                          MRC++
Sbjct: 76  PDIRNKACSKLFKQQELHQRKLLSSYKDMVAVVTRMVNVSRL-------------MRCYV 122

Query: 458 KGPIGSPLMQYSSHSEDNRNDLGDGGGIPVFTFWSVPYHEKLAQEFVKMFASXXXXXXXX 637
           KGP  SP++Q+S+ SE+N +D GDG GIPVF FWS+ Y E+LA+E V+MF S        
Sbjct: 123 KGPSSSPILQFSTSSENN-DDNGDGAGIPVFAFWSISYFEQLAEELVQMFTSELNLKRLL 181

Query: 638 XXXXFSITGEKQKTEKISWADELYQGEFEDLISSGLYCEETCQPLPPRIYDQESDFPVTV 817
                +++ E  +  ++ W+ ELY GEF DL    LY  ETC+P+PP +  ++ + P T+
Sbjct: 182 VAELLTLSCEGPQLNELCWSYELYPGEFNDLSICNLYSIETCKPVPPGLVGRKYEMP-TM 240

Query: 818 RSNNRPDHEVLQVYLTTWLVEVNIETHRVEETLTTVGEEMHVSLS 952
           +  N+P+ EVLQVYLTTWL EVNI+THRV+E    +G+EMHVSLS
Sbjct: 241 QFKNQPNREVLQVYLTTWLAEVNIDTHRVDEIFAIIGDEMHVSLS 285


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