BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004057
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30062.3| unnamed protein product [Vitis vinifera]              143   1e-32
ref|XP_002276914.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   143   1e-32
emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]   143   1e-32
ref|XP_002308919.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
ref|XP_004162536.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   142   4e-32

>emb|CBI30062.3| unnamed protein product [Vitis vinifera]
          Length = 385

 Score =  143 bits (361), Expect = 1e-32
 Identities = 71/87 (81%), Positives = 76/87 (87%), Gaps = 8/87 (9%)
 Frame = -3

Query: 237 AFHPSG----TASYDKTWRLWDIDTGVELLLQEGHSRSVYGISFHRDGSLAASCGLDALA 70
           AFHPSG    TAS+DKTWRLWD++TG ELLLQEGHSRSVYGISFHRDGSLAASCGLDAL 
Sbjct: 182 AFHPSGKYLGTASFDKTWRLWDVETGEELLLQEGHSRSVYGISFHRDGSLAASCGLDALG 241

Query: 69  RVWDLR----IMALEGHVKPVLGVSFS 1
           RVWDLR    I+ALEGHVKPVLG+ FS
Sbjct: 242 RVWDLRSGRSILALEGHVKPVLGICFS 268


>ref|XP_002276914.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
           protein-like [Vitis vinifera]
          Length = 577

 Score =  143 bits (361), Expect = 1e-32
 Identities = 71/87 (81%), Positives = 76/87 (87%), Gaps = 8/87 (9%)
 Frame = -3

Query: 237 AFHPSG----TASYDKTWRLWDIDTGVELLLQEGHSRSVYGISFHRDGSLAASCGLDALA 70
           AFHPSG    TAS+DKTWRLWD++TG ELLLQEGHSRSVYGISFHRDGSLAASCGLDAL 
Sbjct: 374 AFHPSGKYLGTASFDKTWRLWDVETGEELLLQEGHSRSVYGISFHRDGSLAASCGLDALG 433

Query: 69  RVWDLR----IMALEGHVKPVLGVSFS 1
           RVWDLR    I+ALEGHVKPVLG+ FS
Sbjct: 434 RVWDLRSGRSILALEGHVKPVLGICFS 460


>emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]
          Length = 1088

 Score =  143 bits (361), Expect = 1e-32
 Identities = 71/87 (81%), Positives = 76/87 (87%), Gaps = 8/87 (9%)
 Frame = -3

Query: 237  AFHPSG----TASYDKTWRLWDIDTGVELLLQEGHSRSVYGISFHRDGSLAASCGLDALA 70
            AFHPSG    TAS+DKTWRLWD++TG ELLLQEGHSRSVYGISFHRDGSLAASCGLDAL 
Sbjct: 885  AFHPSGKYLGTASFDKTWRLWDVETGEELLLQEGHSRSVYGISFHRDGSLAASCGLDALG 944

Query: 69   RVWDLR----IMALEGHVKPVLGVSFS 1
            RVWDLR    I+ALEGHVKPVLG+ FS
Sbjct: 945  RVWDLRSGRSILALEGHVKPVLGICFS 971


>ref|XP_002308919.1| predicted protein [Populus trichocarpa] gi|222854895|gb|EEE92442.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/87 (80%), Positives = 76/87 (87%), Gaps = 8/87 (9%)
 Frame = -3

Query: 237 AFHPSG----TASYDKTWRLWDIDTGVELLLQEGHSRSVYGISFHRDGSLAASCGLDALA 70
           AFHPSG    T S+DKTWRLWDID+GVELLLQEGHSRS+YGI+FH DGSLAASCGLDALA
Sbjct: 346 AFHPSGKYLGTTSFDKTWRLWDIDSGVELLLQEGHSRSIYGIAFHHDGSLAASCGLDALA 405

Query: 69  RVWDLR----IMALEGHVKPVLGVSFS 1
           RVWDLR    IMA EGHVKP+LG+SFS
Sbjct: 406 RVWDLRTGRSIMAFEGHVKPLLGISFS 432


>ref|XP_004162536.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
           protein-like [Cucumis sativus]
          Length = 568

 Score =  142 bits (357), Expect = 4e-32
 Identities = 69/87 (79%), Positives = 76/87 (87%), Gaps = 8/87 (9%)
 Frame = -3

Query: 237 AFHPSG----TASYDKTWRLWDIDTGVELLLQEGHSRSVYGISFHRDGSLAASCGLDALA 70
           AFHPSG    T S+DKTWRLWD++TGVELLLQEGHSRSVYGI+FH DGSL +SCGLDALA
Sbjct: 366 AFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSCGLDALA 425

Query: 69  RVWDLR----IMALEGHVKPVLGVSFS 1
           RVWDLR    ++ALEGHVKPVLGVSFS
Sbjct: 426 RVWDLRTGRSVLALEGHVKPVLGVSFS 452