BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004056
         (1682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276914.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   729   0.0  
emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]   729   0.0  
ref|XP_004162536.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   710   0.0  
ref|XP_004146749.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   710   0.0  
ref|XP_003535893.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   697   0.0  

>ref|XP_002276914.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
            protein-like [Vitis vinifera]
          Length = 577

 Score =  729 bits (1882), Expect = 0.0
 Identities = 362/471 (76%), Positives = 397/471 (84%)
 Frame = -1

Query: 1604 TASSMEYEVSEESRLARERHEKAVQELLMKRRAHALAVPTNDSAVRARLRRLGEPITLFG 1425
            + S++EYE+SEESR  RER EKA QE LMKRRA ALAVPTND AVR RLRRLGEPITLFG
Sbjct: 107  SGSAVEYEISEESRQFRERQEKAKQEFLMKRRASALAVPTNDMAVRTRLRRLGEPITLFG 166

Query: 1424 EKEMERRDRLRMIMVKLDNEGQLDRLLKXXXXXXXXXXXXXXXXXXGPQTYPFYTEGSKE 1245
            E+EMERRDRLRMIM KLD EGQL++L+K                      YPFYTEGSK 
Sbjct: 167  EREMERRDRLRMIMAKLDAEGQLEKLMKAHEEEEAAAPVAMEEVEEETLQYPFYTEGSKS 226

Query: 1244 LLEARIDIAKYSIMMXXXXXXXXXXXRDDPDEDLDAETNKVLKQAGGLVLDSSEIGDDRP 1065
            LLEAR++IAKYSI             RDDPDEDLDAE + VLK+AG LVLD SEIGDDRP
Sbjct: 227  LLEARVEIAKYSIKRAASRLYRARRKRDDPDEDLDAEMDWVLKEAGSLVLDCSEIGDDRP 286

Query: 1064 LTGCSFSHDGSLLATCAISGVTKLWSMPQVSKVASLKGHTERATDVAFSPVHNYLATASA 885
            L+GCSFSHDG LLA CA+SGV K+WSMPQV+KV++LKGHTERATDVAFSP  N+LATASA
Sbjct: 287  LSGCSFSHDGKLLAACALSGVAKIWSMPQVNKVSALKGHTERATDVAFSPALNHLATASA 346

Query: 884  DCTAILWDSEGSILKKFEGHLDRLARVAFHPSGKYLGTASYDKTWRLWDIDTGVELLLQE 705
            D TA LW+SEGS+LK FEGHLDRLAR+AFHPSGKYLGTAS+DKTWRLWD++TG ELLLQE
Sbjct: 347  DRTARLWNSEGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDVETGEELLLQE 406

Query: 704  GHSRSVYGISFHRDGSLAASCGLDALARVWDLRTGRSIMALEGHVKPVLGVSFSPNGYHL 525
            GHSRSVYGISFHRDGSLAASCGLDAL RVWDLR+GRSI+ALEGHVKPVLG+ FSPNGYHL
Sbjct: 407  GHSRSVYGISFHRDGSLAASCGLDALGRVWDLRSGRSILALEGHVKPVLGICFSPNGYHL 466

Query: 524  ATGGEDNTCRIWDLRKKKSLYTIPAHSNLISQVKFEPEEGYFLATASYDMTAKVWSSRDF 345
            ATG EDNTCRIWDLRKKKSLY IPAHSNL+SQVKFEP+EGYFL TASYDMTAKVWS+RDF
Sbjct: 467  ATGAEDNTCRIWDLRKKKSLYVIPAHSNLVSQVKFEPQEGYFLVTASYDMTAKVWSARDF 526

Query: 344  KPIKTLSGHEAKVTALDIVGGGQCIATVAHDRTIKLWSSRSDEEENTMDID 192
            KP+KTLSGHEAKVT+LDI   G CIATV+HDRTIKLWSS   E+E  MDID
Sbjct: 527  KPVKTLSGHEAKVTSLDITEDGHCIATVSHDRTIKLWSSAEIEKEKAMDID 577


>emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]
          Length = 1088

 Score =  729 bits (1882), Expect = 0.0
 Identities = 362/471 (76%), Positives = 397/471 (84%)
 Frame = -1

Query: 1604 TASSMEYEVSEESRLARERHEKAVQELLMKRRAHALAVPTNDSAVRARLRRLGEPITLFG 1425
            + S++EYE+SEESR  RER EKA QE LMKRRA ALAVPTND AVR RLRRLGEPITLFG
Sbjct: 618  SGSAVEYEISEESRQFRERQEKAKQEFLMKRRASALAVPTNDMAVRTRLRRLGEPITLFG 677

Query: 1424 EKEMERRDRLRMIMVKLDNEGQLDRLLKXXXXXXXXXXXXXXXXXXGPQTYPFYTEGSKE 1245
            E+EMERRDRLRMIM KLD EGQL++L+K                      YPFYTEGSK 
Sbjct: 678  EREMERRDRLRMIMAKLDAEGQLEKLMKAHEEEEAAAPVAMEEVEEETLQYPFYTEGSKS 737

Query: 1244 LLEARIDIAKYSIMMXXXXXXXXXXXRDDPDEDLDAETNKVLKQAGGLVLDSSEIGDDRP 1065
            LLEAR++IAKYSI             RDDPDEDLDAE + VLK+AG LVLD SEIGDDRP
Sbjct: 738  LLEARVEIAKYSIKRAASRLYRARRKRDDPDEDLDAEMDWVLKEAGSLVLDCSEIGDDRP 797

Query: 1064 LTGCSFSHDGSLLATCAISGVTKLWSMPQVSKVASLKGHTERATDVAFSPVHNYLATASA 885
            L+GCSFSHDG LLA CA+SGV K+WSMPQV+KV++LKGHTERATDVAFSP  N+LATASA
Sbjct: 798  LSGCSFSHDGKLLAACALSGVAKIWSMPQVNKVSALKGHTERATDVAFSPALNHLATASA 857

Query: 884  DCTAILWDSEGSILKKFEGHLDRLARVAFHPSGKYLGTASYDKTWRLWDIDTGVELLLQE 705
            D TA LW+SEGS+LK FEGHLDRLAR+AFHPSGKYLGTAS+DKTWRLWD++TG ELLLQE
Sbjct: 858  DRTARLWNSEGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDVETGEELLLQE 917

Query: 704  GHSRSVYGISFHRDGSLAASCGLDALARVWDLRTGRSIMALEGHVKPVLGVSFSPNGYHL 525
            GHSRSVYGISFHRDGSLAASCGLDAL RVWDLR+GRSI+ALEGHVKPVLG+ FSPNGYHL
Sbjct: 918  GHSRSVYGISFHRDGSLAASCGLDALGRVWDLRSGRSILALEGHVKPVLGICFSPNGYHL 977

Query: 524  ATGGEDNTCRIWDLRKKKSLYTIPAHSNLISQVKFEPEEGYFLATASYDMTAKVWSSRDF 345
            ATG EDNTCRIWDLRKKKSLY IPAHSNL+SQVKFEP+EGYFL TASYDMTAKVWS+RDF
Sbjct: 978  ATGAEDNTCRIWDLRKKKSLYVIPAHSNLVSQVKFEPQEGYFLVTASYDMTAKVWSARDF 1037

Query: 344  KPIKTLSGHEAKVTALDIVGGGQCIATVAHDRTIKLWSSRSDEEENTMDID 192
            KP+KTLSGHEAKVT+LDI   G CIATV+HDRTIKLWSS   E+E  MDID
Sbjct: 1038 KPVKTLSGHEAKVTSLDITEDGHCIATVSHDRTIKLWSSAEIEKEKAMDID 1088


>ref|XP_004162536.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
            protein-like [Cucumis sativus]
          Length = 568

 Score =  710 bits (1833), Expect = 0.0
 Identities = 354/476 (74%), Positives = 397/476 (83%), Gaps = 2/476 (0%)
 Frame = -1

Query: 1613 PKRTA--SSMEYEVSEESRLARERHEKAVQELLMKRRAHALAVPTNDSAVRARLRRLGEP 1440
            P RTA  S+ EYE+SEESR ARERHEKA+QE LMKRRA ALAVPTND AVRARLRRLGEP
Sbjct: 94   PSRTAPGSTAEYEISEESRQARERHEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEP 153

Query: 1439 ITLFGEKEMERRDRLRMIMVKLDNEGQLDRLLKXXXXXXXXXXXXXXXXXXGPQTYPFYT 1260
            ITLFGE+EMERRDRLR IM +LD EGQL++L+K                      YPFYT
Sbjct: 154  ITLFGEREMERRDRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYT 213

Query: 1259 EGSKELLEARIDIAKYSIMMXXXXXXXXXXXRDDPDEDLDAETNKVLKQAGGLVLDSSEI 1080
            EGSK LL+ARIDIAKYSI+            RDDPDED++AE +  L+QA  LVLD SEI
Sbjct: 214  EGSKALLDARIDIAKYSILRASSRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEI 273

Query: 1079 GDDRPLTGCSFSHDGSLLATCAISGVTKLWSMPQVSKVASLKGHTERATDVAFSPVHNYL 900
            GDDRPL+GCSFS DG  LAT ++SGV KLWSMPQV KV++ KGHTER TDV FSPV+  L
Sbjct: 274  GDDRPLSGCSFSSDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECL 333

Query: 899  ATASADCTAILWDSEGSILKKFEGHLDRLARVAFHPSGKYLGTASYDKTWRLWDIDTGVE 720
            ATASAD TA LW +EGS+LK FEGHLDRLAR+AFHPSGKYLGT S+DKTWRLWD++TGVE
Sbjct: 334  ATASADRTARLWSAEGSLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVE 393

Query: 719  LLLQEGHSRSVYGISFHRDGSLAASCGLDALARVWDLRTGRSIMALEGHVKPVLGVSFSP 540
            LLLQEGHSRSVYGI+FH DGSL +SCGLDALARVWDLRTGRS++ALEGHVKPVLGVSFSP
Sbjct: 394  LLLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSP 453

Query: 539  NGYHLATGGEDNTCRIWDLRKKKSLYTIPAHSNLISQVKFEPEEGYFLATASYDMTAKVW 360
            NGYHLATGGEDNTCRIWDLRKKKSLY IPAHSNL+SQVK+EP+EGYFL TAS+DMTAK+W
Sbjct: 454  NGYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIW 513

Query: 359  SSRDFKPIKTLSGHEAKVTALDIVGGGQCIATVAHDRTIKLWSSRSDEEENTMDID 192
            S+RDFKP+KTLSGHEAKVT+LDI+  GQCIATV+HDRTIKLWS  S ++  TMD+D
Sbjct: 514  SARDFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWSVNS-KDIQTMDVD 568


>ref|XP_004146749.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
            protein-like [Cucumis sativus]
          Length = 569

 Score =  710 bits (1833), Expect = 0.0
 Identities = 354/476 (74%), Positives = 397/476 (83%), Gaps = 2/476 (0%)
 Frame = -1

Query: 1613 PKRTA--SSMEYEVSEESRLARERHEKAVQELLMKRRAHALAVPTNDSAVRARLRRLGEP 1440
            P RTA  S+ EYE+SEESR ARERHEKA+QE LMKRRA ALAVPTND AVRARLRRLGEP
Sbjct: 95   PSRTAPGSTAEYEISEESRQARERHEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEP 154

Query: 1439 ITLFGEKEMERRDRLRMIMVKLDNEGQLDRLLKXXXXXXXXXXXXXXXXXXGPQTYPFYT 1260
            ITLFGE+EMERRDRLR IM +LD EGQL++L+K                      YPFYT
Sbjct: 155  ITLFGEREMERRDRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYT 214

Query: 1259 EGSKELLEARIDIAKYSIMMXXXXXXXXXXXRDDPDEDLDAETNKVLKQAGGLVLDSSEI 1080
            EGSK LL+ARIDIAKYSI+            RDDPDED++AE +  L+QA  LVLD SEI
Sbjct: 215  EGSKALLDARIDIAKYSILRASSRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEI 274

Query: 1079 GDDRPLTGCSFSHDGSLLATCAISGVTKLWSMPQVSKVASLKGHTERATDVAFSPVHNYL 900
            GDDRPL+GCSFS DG  LAT ++SGV KLWSMPQV KV++ KGHTER TDV FSPV+  L
Sbjct: 275  GDDRPLSGCSFSSDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECL 334

Query: 899  ATASADCTAILWDSEGSILKKFEGHLDRLARVAFHPSGKYLGTASYDKTWRLWDIDTGVE 720
            ATASAD TA LW +EGS+LK FEGHLDRLAR+AFHPSGKYLGT S+DKTWRLWD++TGVE
Sbjct: 335  ATASADRTARLWSAEGSLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVE 394

Query: 719  LLLQEGHSRSVYGISFHRDGSLAASCGLDALARVWDLRTGRSIMALEGHVKPVLGVSFSP 540
            LLLQEGHSRSVYGI+FH DGSL +SCGLDALARVWDLRTGRS++ALEGHVKPVLGVSFSP
Sbjct: 395  LLLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSP 454

Query: 539  NGYHLATGGEDNTCRIWDLRKKKSLYTIPAHSNLISQVKFEPEEGYFLATASYDMTAKVW 360
            NGYHLATGGEDNTCRIWDLRKKKSLY IPAHSNL+SQVK+EP+EGYFL TAS+DMTAK+W
Sbjct: 455  NGYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIW 514

Query: 359  SSRDFKPIKTLSGHEAKVTALDIVGGGQCIATVAHDRTIKLWSSRSDEEENTMDID 192
            S+RDFKP+KTLSGHEAKVT+LDI+  GQCIATV+HDRTIKLWS  S ++  TMD+D
Sbjct: 515  SARDFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWSVNS-KDIQTMDVD 569


>ref|XP_003535893.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
            protein-like [Glycine max]
          Length = 570

 Score =  697 bits (1798), Expect = 0.0
 Identities = 348/466 (74%), Positives = 392/466 (84%)
 Frame = -1

Query: 1589 EYEVSEESRLARERHEKAVQELLMKRRAHALAVPTNDSAVRARLRRLGEPITLFGEKEME 1410
            EYE+SEESRL RER EKA+QEL+MKRRA ALAVPTND AVRARLR LGEPITLFGE+EME
Sbjct: 108  EYEISEESRLVRERQEKAMQELMMKRRAAALAVPTNDMAVRARLRHLGEPITLFGEREME 167

Query: 1409 RRDRLRMIMVKLDNEGQLDRLLKXXXXXXXXXXXXXXXXXXGPQTYPFYTEGSKELLEAR 1230
            RRDRLRMIM KLD EGQL++L+K                    Q YPFYTEGSK LL+AR
Sbjct: 168  RRDRLRMIMAKLDAEGQLEKLMKAHEEEEAAASASIDEAEEELQ-YPFYTEGSKALLDAR 226

Query: 1229 IDIAKYSIMMXXXXXXXXXXXRDDPDEDLDAETNKVLKQAGGLVLDSSEIGDDRPLTGCS 1050
            I IAKYS+             RDDPDED+DAE N  LKQAG L L+ SEIGDDRPL+GCS
Sbjct: 227  IYIAKYSLTRAALRIQRAQRRRDDPDEDMDAEMNWALKQAGNLSLEFSEIGDDRPLSGCS 286

Query: 1049 FSHDGSLLATCAISGVTKLWSMPQVSKVASLKGHTERATDVAFSPVHNYLATASADCTAI 870
            FS DG  LATC+++G +KLWSMP++ K +S KGHTERATDVA+SPVH++LATASAD TA 
Sbjct: 287  FSRDGKWLATCSLTGASKLWSMPKIKKHSSFKGHTERATDVAYSPVHDHLATASADRTAK 346

Query: 869  LWDSEGSILKKFEGHLDRLARVAFHPSGKYLGTASYDKTWRLWDIDTGVELLLQEGHSRS 690
             W+ +GS+LK FEGHLDRLAR+AFHPSGKYLGTAS+DKTWRLWDI+TG ELLLQEGHSRS
Sbjct: 347  YWN-QGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDIETGDELLLQEGHSRS 405

Query: 689  VYGISFHRDGSLAASCGLDALARVWDLRTGRSIMALEGHVKPVLGVSFSPNGYHLATGGE 510
            VYG++FH DGSLAASCGLD+LARVWDLRTGRSI+ALEGHVKPVLG+SFSPNGYHLATGGE
Sbjct: 406  VYGLAFHNDGSLAASCGLDSLARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGE 465

Query: 509  DNTCRIWDLRKKKSLYTIPAHSNLISQVKFEPEEGYFLATASYDMTAKVWSSRDFKPIKT 330
            DNTCRIWDLRKKKS YTIPAHSNLISQVKFEP+EGYFL TASYDMTAKVWS RDFKP+KT
Sbjct: 466  DNTCRIWDLRKKKSFYTIPAHSNLISQVKFEPQEGYFLVTASYDMTAKVWSGRDFKPVKT 525

Query: 329  LSGHEAKVTALDIVGGGQCIATVAHDRTIKLWSSRSDEEENTMDID 192
            LSGHEAKVT++D++G G  I TV+HDRTIKLWSS + +E+  MD+D
Sbjct: 526  LSGHEAKVTSVDVLGDGGYIVTVSHDRTIKLWSSNTTDEQ-AMDVD 570