BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004050
         (1152 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 ...   288   2e-75
ref|XP_002531766.1| transcription factor, putative [Ricinus comm...   286   9e-75
ref|XP_003536791.1| PREDICTED: high mobility group B protein 15-...   272   1e-70
ref|XP_002330570.1| high mobility group family [Populus trichoca...   271   2e-70
ref|XP_003555635.1| PREDICTED: high mobility group B protein 15-...   268   2e-69

>ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 [Vitis vinifera]
           gi|296090037|emb|CBI39856.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  288 bits (737), Expect = 2e-75
 Identities = 156/310 (50%), Positives = 197/310 (63%), Gaps = 10/310 (3%)
 Frame = +1

Query: 64  YEQVVQNGQLFMDTVQDLHKSQGSKFMVPIMGGXXXXXXXXXXXXXXXXXXXXXXXXXAL 243
           Y++VVQ+  LF  T++D H+S G+KFMVP  GG                         AL
Sbjct: 47  YQEVVQSADLFWQTLKDFHRSFGTKFMVPTTGGK------------------------AL 82

Query: 244 DLHRLFVEVTARGGLEKVIRDRQWKEIIAVFNFPSTITNASFVLRKYYINLLHHYEQVYY 423
           DLHRLFVEVT+RGGLEKVIRDR+WKE+  VF FP+TIT+ASFVLRKYY++LLHHYEQVYY
Sbjct: 83  DLHRLFVEVTSRGGLEKVIRDRKWKEVTTVFKFPTTITSASFVLRKYYLSLLHHYEQVYY 142

Query: 424 FRKQGPPSVQLQ---------AATPPCEEKNSNAPQLPENSELWTGRWVTGAIDGKFDNG 576
           FRKQ  P              +AT P  + ++    LP +  L  G  VTG IDGKFDNG
Sbjct: 143 FRKQSFPISMADPLNSSPINGSATTPVFQDSATTNDLPVSPRLQPGCLVTGTIDGKFDNG 202

Query: 577 YLVTVSFGSEKLKGVLYHAPVEPQKLG-NAIXXXXXXXXXXXXXXXXXXDPFHPKPNRSG 753
           YLV+V+ GS+ LKGVLYH P     +  ++                   DP  PK ++SG
Sbjct: 203 YLVSVNLGSDVLKGVLYHIPNNESHMSRSSNASAVPPPRNWKRSQLALRDPSRPKRSQSG 262

Query: 754 YNFFYSEHYARLKSLHHGQEKTLSTKISHLWSKLTEGEKQVYQEKGAIDKQRYEHEMTEY 933
           YNFF++E+YARLK L+ GQE+ +S KI  LW++LT+ EKQVYQEKG IDK+RY+ EM EY
Sbjct: 263 YNFFFAENYARLKPLYSGQERAISKKIGFLWNRLTDAEKQVYQEKGMIDKERYKTEMLEY 322

Query: 934 RKSSGSAKPK 963
           R S+  +KP+
Sbjct: 323 R-SAYDSKPQ 331


>ref|XP_002531766.1| transcription factor, putative [Ricinus communis]
           gi|223528602|gb|EEF30622.1| transcription factor,
           putative [Ricinus communis]
          Length = 313

 Score =  286 bits (731), Expect = 9e-75
 Identities = 151/298 (50%), Positives = 187/298 (62%), Gaps = 5/298 (1%)
 Frame = +1

Query: 64  YEQVVQNGQLFMDTVQDLHKSQGSKFMVPIMGGXXXXXXXXXXXXXXXXXXXXXXXXXAL 243
           +E VVQ+  LF + ++  HKS G+KFMVP +GG                         AL
Sbjct: 37  FEDVVQSSDLFWEKLKSFHKSFGTKFMVPTVGGK------------------------AL 72

Query: 244 DLHRLFVEVTARGGLEKVIRDRQWKEIIAVFNFPSTITNASFVLRKYYINLLHHYEQVYY 423
           DLH LFVEVT+RGGLEKV+RDR+WKE+IA FNFPSTIT+ASFVLRKYY++LL+H+EQVY 
Sbjct: 73  DLHHLFVEVTSRGGLEKVVRDRKWKEVIAAFNFPSTITSASFVLRKYYLSLLYHFEQVYQ 132

Query: 424 FRKQGP-----PSVQLQAATPPCEEKNSNAPQLPENSELWTGRWVTGAIDGKFDNGYLVT 588
           F KQ P       V           +     Q P +S+L  G  V G IDGKFDNGYL+T
Sbjct: 133 FHKQVPSVSVSDDVNGNLVNGSATVEGVTVNQFPGSSQLQLGSSVNGTIDGKFDNGYLIT 192

Query: 589 VSFGSEKLKGVLYHAPVEPQKLGNAIXXXXXXXXXXXXXXXXXXDPFHPKPNRSGYNFFY 768
           V+ GSE+LKGVLYH P E     ++                   DP  PK +RSGYNFF+
Sbjct: 193 VTLGSEQLKGVLYHIPNEFYMSQSSHNSDLPPRRHRKRSRLLLRDPSRPKSHRSGYNFFF 252

Query: 769 SEHYARLKSLHHGQEKTLSTKISHLWSKLTEGEKQVYQEKGAIDKQRYEHEMTEYRKS 942
           +EHYA+LK LH+GQEK +S KI  LW+ LTE EK++YQEKG  DK+RY++EM EYR S
Sbjct: 253 AEHYAQLKPLHYGQEKVISKKIGLLWNNLTEAEKEIYQEKGLKDKERYKNEMLEYRSS 310


>ref|XP_003536791.1| PREDICTED: high mobility group B protein 15-like [Glycine max]
          Length = 425

 Score =  272 bits (696), Expect = 1e-70
 Identities = 153/332 (46%), Positives = 196/332 (59%), Gaps = 35/332 (10%)
 Frame = +1

Query: 49  YSLTSYEQVVQNGQLFMDTVQDLHKSQGSKFMVPIMGGXXXXXXXXXXXXXXXXXXXXXX 228
           +SL  YE+VV N QLFM T++ LH + G+KFM+PI+GG                      
Sbjct: 27  FSLAKYEEVVDNPQLFMFTLEKLHAAMGTKFMIPIVGGRE-------------------- 66

Query: 229 XXXALDLHRLFVEVTARGGLEKVIRDRQWKEIIAVFNFPSTITNASFVLRKYYINLLHHY 408
               LDLHRLFVEVT+RGG+ K+IR+R+WK++ +VFNFPST TNASFVLRKYY +LL+HY
Sbjct: 67  ----LDLHRLFVEVTSRGGIAKIIRERKWKDVTSVFNFPSTATNASFVLRKYYASLLYHY 122

Query: 409 EQVYYFRKQ-----GPPSVQLQAATP------------------PCEEKNSNAPQLPE-N 516
           EQ+Y+F+ +      P ++Q Q+  P                    ++ N NA +LPE  
Sbjct: 123 EQIYFFKAREWDPTAPDALQNQSTLPVPPPKMQFPQPLSEIQPAVFQQSNINAAKLPEAM 182

Query: 517 SELWTGRWVTGAIDGKFDNGYLVTVSFGSEKLKGVLYHAPVEP----------QKLGNA- 663
           +    G  V G IDGKF++GYLVTV+ GSEKLKGVLY AP  P           K  NA 
Sbjct: 183 AASSAGSPVIGVIDGKFESGYLVTVTIGSEKLKGVLYQAPQNPVLVASHHSASAKNNNAS 242

Query: 664 IXXXXXXXXXXXXXXXXXXDPFHPKPNRSGYNFFYSEHYARLKSLHHGQEKTLSTKISHL 843
                              DP HPKPNRSGYNFF++E +ARLK LHHG+++ +S  I  L
Sbjct: 243 ASLGVHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKLLHHGKDREISRMIGEL 302

Query: 844 WSKLTEGEKQVYQEKGAIDKQRYEHEMTEYRK 939
           W+KL E EK VYQEK   DK+RY  EM +YR+
Sbjct: 303 WNKLKESEKTVYQEKAMKDKERYRAEMEDYRE 334


>ref|XP_002330570.1| high mobility group family [Populus trichocarpa]
           gi|222872128|gb|EEF09259.1| high mobility group family
           [Populus trichocarpa]
          Length = 316

 Score =  271 bits (694), Expect = 2e-70
 Identities = 145/300 (48%), Positives = 184/300 (61%), Gaps = 7/300 (2%)
 Frame = +1

Query: 64  YEQVVQNGQLFMDTVQDLHKSQGSKFMVPIMGGXXXXXXXXXXXXXXXXXXXXXXXXXAL 243
           YE + Q+  LF + ++  H+S G+KFMVP +GG                         AL
Sbjct: 38  YEDIAQSSDLFWEKLKAFHQSFGTKFMVPTVGGK------------------------AL 73

Query: 244 DLHRLFVEVTARGGLEKVIRDRQWKEIIAVFNFPSTITNASFVLRKYYINLLHHYEQVYY 423
           DLH LFVEVT+RGG+EKVI DR+WKE+I  FNFP+TIT+ASFVLRK+Y++LL+H+EQVY+
Sbjct: 74  DLHHLFVEVTSRGGIEKVITDRKWKEVITAFNFPTTITSASFVLRKHYLSLLYHFEQVYH 133

Query: 424 FRKQGPPSVQLQAAT-------PPCEEKNSNAPQLPENSELWTGRWVTGAIDGKFDNGYL 582
           F KQ P      A             E+ +   Q   + +L  G  V+G IDGKFDNGYL
Sbjct: 134 FNKQIPLVSGTDAMNGRSLVNGSATLEEGAITNQFSSSQQLQIGCSVSGIIDGKFDNGYL 193

Query: 583 VTVSFGSEKLKGVLYHAPVEPQKLGNAIXXXXXXXXXXXXXXXXXXDPFHPKPNRSGYNF 762
           VTV+ G+ +LKGVLYH P    +  ++                   DP  PK NRSGYNF
Sbjct: 194 VTVNLGTNQLKGVLYHIPHTFHESQDSRSSDLPPRRRRKRSRLALRDPSQPKSNRSGYNF 253

Query: 763 FYSEHYARLKSLHHGQEKTLSTKISHLWSKLTEGEKQVYQEKGAIDKQRYEHEMTEYRKS 942
           F++EHYA+LK LHHGQEK +S KI  LW+ LTE EKQVYQEKG  DK++Y +EM EYR S
Sbjct: 254 FFTEHYAQLKPLHHGQEKVISKKIGLLWNNLTEAEKQVYQEKGLRDKEKYRNEMLEYRSS 313


>ref|XP_003555635.1| PREDICTED: high mobility group B protein 15-like [Glycine max]
          Length = 419

 Score =  268 bits (685), Expect = 2e-69
 Identities = 150/330 (45%), Positives = 194/330 (58%), Gaps = 35/330 (10%)
 Frame = +1

Query: 55  LTSYEQVVQNGQLFMDTVQDLHKSQGSKFMVPIMGGXXXXXXXXXXXXXXXXXXXXXXXX 234
           L  YE+VV N QLFM T++ LH + G+KFM+PI+GG                        
Sbjct: 28  LAKYEEVVDNPQLFMFTLEKLHAAMGTKFMIPIVGGRE---------------------- 65

Query: 235 XALDLHRLFVEVTARGGLEKVIRDRQWKEIIAVFNFPSTITNASFVLRKYYINLLHHYEQ 414
             LDLHRLFVEV++RGG+ K+IR+R+WK++ +VFNFPST TNASFVLRKYY++LL+HYEQ
Sbjct: 66  --LDLHRLFVEVSSRGGIAKIIRERKWKDVTSVFNFPSTATNASFVLRKYYVSLLYHYEQ 123

Query: 415 VYYFRKQ------------------GPPSVQLQ---AATPPC--EEKNSNAPQLPE-NSE 522
           +Y+F+ +                   PP +Q Q   + T P   +  N NA +LPE  + 
Sbjct: 124 IYFFKAREWDPIAPDVSQNQSTLPVPPPKMQFQQPLSETQPAVFQLSNVNAAKLPEAMAA 183

Query: 523 LWTGRWVTGAIDGKFDNGYLVTVSFGSEKLKGVLYHAPVEPQKLGN-----------AIX 669
              G  V G IDGKF++GYLVTV+ GSEKLKGVLY AP  P    +           +  
Sbjct: 184 SSAGSPVIGVIDGKFESGYLVTVTIGSEKLKGVLYQAPQNPVLTASHHSASANNNNASAS 243

Query: 670 XXXXXXXXXXXXXXXXXDPFHPKPNRSGYNFFYSEHYARLKSLHHGQEKTLSTKISHLWS 849
                            DP HPKPNRSGYNFF++E +ARLK LHHG+++ +S  I  LW+
Sbjct: 244 LGVHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKLLHHGKDREISRMIGELWN 303

Query: 850 KLTEGEKQVYQEKGAIDKQRYEHEMTEYRK 939
           KL E EK VYQEK   DK+RY  EM +YR+
Sbjct: 304 KLKESEKTVYQEKAMKDKERYRVEMEDYRE 333