BLASTX nr result
ID: Coptis24_contig00004050
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004050 (1152 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 ... 288 2e-75 ref|XP_002531766.1| transcription factor, putative [Ricinus comm... 286 9e-75 ref|XP_003536791.1| PREDICTED: high mobility group B protein 15-... 272 1e-70 ref|XP_002330570.1| high mobility group family [Populus trichoca... 271 2e-70 ref|XP_003555635.1| PREDICTED: high mobility group B protein 15-... 268 2e-69 >ref|XP_002264357.1| PREDICTED: high mobility group B protein 10 [Vitis vinifera] gi|296090037|emb|CBI39856.3| unnamed protein product [Vitis vinifera] Length = 331 Score = 288 bits (737), Expect = 2e-75 Identities = 156/310 (50%), Positives = 197/310 (63%), Gaps = 10/310 (3%) Frame = +1 Query: 64 YEQVVQNGQLFMDTVQDLHKSQGSKFMVPIMGGXXXXXXXXXXXXXXXXXXXXXXXXXAL 243 Y++VVQ+ LF T++D H+S G+KFMVP GG AL Sbjct: 47 YQEVVQSADLFWQTLKDFHRSFGTKFMVPTTGGK------------------------AL 82 Query: 244 DLHRLFVEVTARGGLEKVIRDRQWKEIIAVFNFPSTITNASFVLRKYYINLLHHYEQVYY 423 DLHRLFVEVT+RGGLEKVIRDR+WKE+ VF FP+TIT+ASFVLRKYY++LLHHYEQVYY Sbjct: 83 DLHRLFVEVTSRGGLEKVIRDRKWKEVTTVFKFPTTITSASFVLRKYYLSLLHHYEQVYY 142 Query: 424 FRKQGPPSVQLQ---------AATPPCEEKNSNAPQLPENSELWTGRWVTGAIDGKFDNG 576 FRKQ P +AT P + ++ LP + L G VTG IDGKFDNG Sbjct: 143 FRKQSFPISMADPLNSSPINGSATTPVFQDSATTNDLPVSPRLQPGCLVTGTIDGKFDNG 202 Query: 577 YLVTVSFGSEKLKGVLYHAPVEPQKLG-NAIXXXXXXXXXXXXXXXXXXDPFHPKPNRSG 753 YLV+V+ GS+ LKGVLYH P + ++ DP PK ++SG Sbjct: 203 YLVSVNLGSDVLKGVLYHIPNNESHMSRSSNASAVPPPRNWKRSQLALRDPSRPKRSQSG 262 Query: 754 YNFFYSEHYARLKSLHHGQEKTLSTKISHLWSKLTEGEKQVYQEKGAIDKQRYEHEMTEY 933 YNFF++E+YARLK L+ GQE+ +S KI LW++LT+ EKQVYQEKG IDK+RY+ EM EY Sbjct: 263 YNFFFAENYARLKPLYSGQERAISKKIGFLWNRLTDAEKQVYQEKGMIDKERYKTEMLEY 322 Query: 934 RKSSGSAKPK 963 R S+ +KP+ Sbjct: 323 R-SAYDSKPQ 331 >ref|XP_002531766.1| transcription factor, putative [Ricinus communis] gi|223528602|gb|EEF30622.1| transcription factor, putative [Ricinus communis] Length = 313 Score = 286 bits (731), Expect = 9e-75 Identities = 151/298 (50%), Positives = 187/298 (62%), Gaps = 5/298 (1%) Frame = +1 Query: 64 YEQVVQNGQLFMDTVQDLHKSQGSKFMVPIMGGXXXXXXXXXXXXXXXXXXXXXXXXXAL 243 +E VVQ+ LF + ++ HKS G+KFMVP +GG AL Sbjct: 37 FEDVVQSSDLFWEKLKSFHKSFGTKFMVPTVGGK------------------------AL 72 Query: 244 DLHRLFVEVTARGGLEKVIRDRQWKEIIAVFNFPSTITNASFVLRKYYINLLHHYEQVYY 423 DLH LFVEVT+RGGLEKV+RDR+WKE+IA FNFPSTIT+ASFVLRKYY++LL+H+EQVY Sbjct: 73 DLHHLFVEVTSRGGLEKVVRDRKWKEVIAAFNFPSTITSASFVLRKYYLSLLYHFEQVYQ 132 Query: 424 FRKQGP-----PSVQLQAATPPCEEKNSNAPQLPENSELWTGRWVTGAIDGKFDNGYLVT 588 F KQ P V + Q P +S+L G V G IDGKFDNGYL+T Sbjct: 133 FHKQVPSVSVSDDVNGNLVNGSATVEGVTVNQFPGSSQLQLGSSVNGTIDGKFDNGYLIT 192 Query: 589 VSFGSEKLKGVLYHAPVEPQKLGNAIXXXXXXXXXXXXXXXXXXDPFHPKPNRSGYNFFY 768 V+ GSE+LKGVLYH P E ++ DP PK +RSGYNFF+ Sbjct: 193 VTLGSEQLKGVLYHIPNEFYMSQSSHNSDLPPRRHRKRSRLLLRDPSRPKSHRSGYNFFF 252 Query: 769 SEHYARLKSLHHGQEKTLSTKISHLWSKLTEGEKQVYQEKGAIDKQRYEHEMTEYRKS 942 +EHYA+LK LH+GQEK +S KI LW+ LTE EK++YQEKG DK+RY++EM EYR S Sbjct: 253 AEHYAQLKPLHYGQEKVISKKIGLLWNNLTEAEKEIYQEKGLKDKERYKNEMLEYRSS 310 >ref|XP_003536791.1| PREDICTED: high mobility group B protein 15-like [Glycine max] Length = 425 Score = 272 bits (696), Expect = 1e-70 Identities = 153/332 (46%), Positives = 196/332 (59%), Gaps = 35/332 (10%) Frame = +1 Query: 49 YSLTSYEQVVQNGQLFMDTVQDLHKSQGSKFMVPIMGGXXXXXXXXXXXXXXXXXXXXXX 228 +SL YE+VV N QLFM T++ LH + G+KFM+PI+GG Sbjct: 27 FSLAKYEEVVDNPQLFMFTLEKLHAAMGTKFMIPIVGGRE-------------------- 66 Query: 229 XXXALDLHRLFVEVTARGGLEKVIRDRQWKEIIAVFNFPSTITNASFVLRKYYINLLHHY 408 LDLHRLFVEVT+RGG+ K+IR+R+WK++ +VFNFPST TNASFVLRKYY +LL+HY Sbjct: 67 ----LDLHRLFVEVTSRGGIAKIIRERKWKDVTSVFNFPSTATNASFVLRKYYASLLYHY 122 Query: 409 EQVYYFRKQ-----GPPSVQLQAATP------------------PCEEKNSNAPQLPE-N 516 EQ+Y+F+ + P ++Q Q+ P ++ N NA +LPE Sbjct: 123 EQIYFFKAREWDPTAPDALQNQSTLPVPPPKMQFPQPLSEIQPAVFQQSNINAAKLPEAM 182 Query: 517 SELWTGRWVTGAIDGKFDNGYLVTVSFGSEKLKGVLYHAPVEP----------QKLGNA- 663 + G V G IDGKF++GYLVTV+ GSEKLKGVLY AP P K NA Sbjct: 183 AASSAGSPVIGVIDGKFESGYLVTVTIGSEKLKGVLYQAPQNPVLVASHHSASAKNNNAS 242 Query: 664 IXXXXXXXXXXXXXXXXXXDPFHPKPNRSGYNFFYSEHYARLKSLHHGQEKTLSTKISHL 843 DP HPKPNRSGYNFF++E +ARLK LHHG+++ +S I L Sbjct: 243 ASLGVHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKLLHHGKDREISRMIGEL 302 Query: 844 WSKLTEGEKQVYQEKGAIDKQRYEHEMTEYRK 939 W+KL E EK VYQEK DK+RY EM +YR+ Sbjct: 303 WNKLKESEKTVYQEKAMKDKERYRAEMEDYRE 334 >ref|XP_002330570.1| high mobility group family [Populus trichocarpa] gi|222872128|gb|EEF09259.1| high mobility group family [Populus trichocarpa] Length = 316 Score = 271 bits (694), Expect = 2e-70 Identities = 145/300 (48%), Positives = 184/300 (61%), Gaps = 7/300 (2%) Frame = +1 Query: 64 YEQVVQNGQLFMDTVQDLHKSQGSKFMVPIMGGXXXXXXXXXXXXXXXXXXXXXXXXXAL 243 YE + Q+ LF + ++ H+S G+KFMVP +GG AL Sbjct: 38 YEDIAQSSDLFWEKLKAFHQSFGTKFMVPTVGGK------------------------AL 73 Query: 244 DLHRLFVEVTARGGLEKVIRDRQWKEIIAVFNFPSTITNASFVLRKYYINLLHHYEQVYY 423 DLH LFVEVT+RGG+EKVI DR+WKE+I FNFP+TIT+ASFVLRK+Y++LL+H+EQVY+ Sbjct: 74 DLHHLFVEVTSRGGIEKVITDRKWKEVITAFNFPTTITSASFVLRKHYLSLLYHFEQVYH 133 Query: 424 FRKQGPPSVQLQAAT-------PPCEEKNSNAPQLPENSELWTGRWVTGAIDGKFDNGYL 582 F KQ P A E+ + Q + +L G V+G IDGKFDNGYL Sbjct: 134 FNKQIPLVSGTDAMNGRSLVNGSATLEEGAITNQFSSSQQLQIGCSVSGIIDGKFDNGYL 193 Query: 583 VTVSFGSEKLKGVLYHAPVEPQKLGNAIXXXXXXXXXXXXXXXXXXDPFHPKPNRSGYNF 762 VTV+ G+ +LKGVLYH P + ++ DP PK NRSGYNF Sbjct: 194 VTVNLGTNQLKGVLYHIPHTFHESQDSRSSDLPPRRRRKRSRLALRDPSQPKSNRSGYNF 253 Query: 763 FYSEHYARLKSLHHGQEKTLSTKISHLWSKLTEGEKQVYQEKGAIDKQRYEHEMTEYRKS 942 F++EHYA+LK LHHGQEK +S KI LW+ LTE EKQVYQEKG DK++Y +EM EYR S Sbjct: 254 FFTEHYAQLKPLHHGQEKVISKKIGLLWNNLTEAEKQVYQEKGLRDKEKYRNEMLEYRSS 313 >ref|XP_003555635.1| PREDICTED: high mobility group B protein 15-like [Glycine max] Length = 419 Score = 268 bits (685), Expect = 2e-69 Identities = 150/330 (45%), Positives = 194/330 (58%), Gaps = 35/330 (10%) Frame = +1 Query: 55 LTSYEQVVQNGQLFMDTVQDLHKSQGSKFMVPIMGGXXXXXXXXXXXXXXXXXXXXXXXX 234 L YE+VV N QLFM T++ LH + G+KFM+PI+GG Sbjct: 28 LAKYEEVVDNPQLFMFTLEKLHAAMGTKFMIPIVGGRE---------------------- 65 Query: 235 XALDLHRLFVEVTARGGLEKVIRDRQWKEIIAVFNFPSTITNASFVLRKYYINLLHHYEQ 414 LDLHRLFVEV++RGG+ K+IR+R+WK++ +VFNFPST TNASFVLRKYY++LL+HYEQ Sbjct: 66 --LDLHRLFVEVSSRGGIAKIIRERKWKDVTSVFNFPSTATNASFVLRKYYVSLLYHYEQ 123 Query: 415 VYYFRKQ------------------GPPSVQLQ---AATPPC--EEKNSNAPQLPE-NSE 522 +Y+F+ + PP +Q Q + T P + N NA +LPE + Sbjct: 124 IYFFKAREWDPIAPDVSQNQSTLPVPPPKMQFQQPLSETQPAVFQLSNVNAAKLPEAMAA 183 Query: 523 LWTGRWVTGAIDGKFDNGYLVTVSFGSEKLKGVLYHAPVEPQKLGN-----------AIX 669 G V G IDGKF++GYLVTV+ GSEKLKGVLY AP P + + Sbjct: 184 SSAGSPVIGVIDGKFESGYLVTVTIGSEKLKGVLYQAPQNPVLTASHHSASANNNNASAS 243 Query: 670 XXXXXXXXXXXXXXXXXDPFHPKPNRSGYNFFYSEHYARLKSLHHGQEKTLSTKISHLWS 849 DP HPKPNRSGYNFF++E +ARLK LHHG+++ +S I LW+ Sbjct: 244 LGVHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKLLHHGKDREISRMIGELWN 303 Query: 850 KLTEGEKQVYQEKGAIDKQRYEHEMTEYRK 939 KL E EK VYQEK DK+RY EM +YR+ Sbjct: 304 KLKESEKTVYQEKAMKDKERYRVEMEDYRE 333