BLASTX nr result

ID: Coptis24_contig00004042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004042
         (1744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28133.3| unnamed protein product [Vitis vinifera]              599   e-169
ref|XP_002284920.2| PREDICTED: uncharacterized sodium-dependent ...   597   e-168
ref|XP_004149855.1| PREDICTED: sodium/pyruvate cotransporter BAS...   590   e-166
ref|NP_850089.1| Sodium bile acid symporter-like protein [Arabid...   587   e-165
gb|AAM18095.1|AF498303_1 putative sodium-dependent bile acid sym...   586   e-165

>emb|CBI28133.3| unnamed protein product [Vitis vinifera]
          Length = 417

 Score =  599 bits (1545), Expect = e-169
 Identities = 310/420 (73%), Positives = 353/420 (84%), Gaps = 14/420 (3%)
 Frame = -3

Query: 1616 SSMSRLVHKKCNWKGYSTSCNRPTCCFYTTRLPT--------NLADMRRNVVKCSLQNPI 1461
            +SMSR V K C  + +      P+ C    R+ T        +L +  RN+   ++QN  
Sbjct: 2    ASMSRFVLKDCKLQPFDALYG-PSSCSLARRIHTRVEVRGGCSLPEKGRNL---AIQNKQ 57

Query: 1460 H----AFSSP--IVQTSRSHQVLCKAEADLSGNVPSSTPSGLSQYENIIETLTTLFPLWV 1299
            H    A S P  I+Q SR+  +LCKA A++SG+VP +TP+G+SQYE IIETLTTLFP+WV
Sbjct: 58   HSSIVALSGPSSIIQASRNSHILCKAAANVSGDVPGNTPAGMSQYERIIETLTTLFPVWV 117

Query: 1298 ILGTIIGIYKPSAVTWLQTDLFTVGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQY 1119
            ILGT+IGIYKP+AVTWL+TDLFT+ LGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQY
Sbjct: 118  ILGTVIGIYKPAAVTWLETDLFTICLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQY 177

Query: 1118 IIKPILGFLIAMSMKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIG 939
            +IKP+LGF I M++KLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIG
Sbjct: 178  LIKPMLGFFIVMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIG 237

Query: 938  AIIMTPLLTKLLAGQLVPVDAAGLALSTFQVVLLPTIVGVLANEYFPKFTSKIIAVTPLI 759
            AI+MTPLLTKLLAGQLVPVDAAGLA+STFQVVL+PT++GVL+NE+FPKFTSKI+ VTPL+
Sbjct: 238  AIVMTPLLTKLLAGQLVPVDAAGLAISTFQVVLVPTVIGVLSNEFFPKFTSKIVTVTPLV 297

Query: 758  GVILTTLLCASPIGQVADVLKTQGVQLIIPVALLHAAAFALGYFFSKISFGESTSRTISI 579
            GVILTTLLCASPIG+V+DVLKTQG QLI+PVA+LHAAAFALGY+ SKISFGESTSRTISI
Sbjct: 298  GVILTTLLCASPIGKVSDVLKTQGAQLILPVAILHAAAFALGYWVSKISFGESTSRTISI 357

Query: 578  ECGMQSSALGFLLAQKHFTNXXXXXXXXXXXVCMALGGSALAVFWRNRPISADDKDDFKE 399
            ECGMQSSALGFLLAQKHFTN           VCMALGGSALAVFWRN+PI  DDKDDFKE
Sbjct: 358  ECGMQSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSALAVFWRNQPIPVDDKDDFKE 417


>ref|XP_002284920.2| PREDICTED: uncharacterized sodium-dependent transporter yocS [Vitis
            vinifera]
          Length = 414

 Score =  597 bits (1540), Expect = e-168
 Identities = 309/418 (73%), Positives = 351/418 (83%), Gaps = 14/418 (3%)
 Frame = -3

Query: 1610 MSRLVHKKCNWKGYSTSCNRPTCCFYTTRLPT--------NLADMRRNVVKCSLQNPIH- 1458
            MSR V K C  + +      P+ C    R+ T        +L +  RN+   ++QN  H 
Sbjct: 1    MSRFVLKDCKLQPFDALYG-PSSCSLARRIHTRVEVRGGCSLPEKGRNL---AIQNKQHS 56

Query: 1457 ---AFSSP--IVQTSRSHQVLCKAEADLSGNVPSSTPSGLSQYENIIETLTTLFPLWVIL 1293
               A S P  I+Q SR+  +LCKA A++SG+VP +TP+G+SQYE IIETLTTLFP+WVIL
Sbjct: 57   SIVALSGPSSIIQASRNSHILCKAAANVSGDVPGNTPAGMSQYERIIETLTTLFPVWVIL 116

Query: 1292 GTIIGIYKPSAVTWLQTDLFTVGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYII 1113
            GT+IGIYKP+AVTWL+TDLFT+ LGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQY+I
Sbjct: 117  GTVIGIYKPAAVTWLETDLFTICLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQYLI 176

Query: 1112 KPILGFLIAMSMKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAI 933
            KP+LGF I M++KLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAI
Sbjct: 177  KPMLGFFIVMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIGAI 236

Query: 932  IMTPLLTKLLAGQLVPVDAAGLALSTFQVVLLPTIVGVLANEYFPKFTSKIIAVTPLIGV 753
            +MTPLLTKLLAGQLVPVDAAGLA+STFQVVL+PT++GVL+NE+FPKFTSKI+ VTPL+GV
Sbjct: 237  VMTPLLTKLLAGQLVPVDAAGLAISTFQVVLVPTVIGVLSNEFFPKFTSKIVTVTPLVGV 296

Query: 752  ILTTLLCASPIGQVADVLKTQGVQLIIPVALLHAAAFALGYFFSKISFGESTSRTISIEC 573
            ILTTLLCASPIG+V+DVLKTQG QLI+PVA+LHAAAFALGY+ SKISFGESTSRTISIEC
Sbjct: 297  ILTTLLCASPIGKVSDVLKTQGAQLILPVAILHAAAFALGYWVSKISFGESTSRTISIEC 356

Query: 572  GMQSSALGFLLAQKHFTNXXXXXXXXXXXVCMALGGSALAVFWRNRPISADDKDDFKE 399
            GMQSSALGFLLAQKHFTN           VCMALGGSALAVFWRN+PI  DDKDDFKE
Sbjct: 357  GMQSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSALAVFWRNQPIPVDDKDDFKE 414


>ref|XP_004149855.1| PREDICTED: sodium/pyruvate cotransporter BASS2, chloroplastic-like
            [Cucumis sativus] gi|449518037|ref|XP_004166050.1|
            PREDICTED: sodium/pyruvate cotransporter BASS2,
            chloroplastic-like [Cucumis sativus]
          Length = 420

 Score =  590 bits (1522), Expect = e-166
 Identities = 310/420 (73%), Positives = 350/420 (83%), Gaps = 14/420 (3%)
 Frame = -3

Query: 1616 SSMSRLVHKKCNWKGYSTSCNRPTCCFYTTRLPTNL--------ADMRRN---VVKCSLQ 1470
            +S+S+L    C  + +    NR    F   +L ++L        +D RR    V +  L 
Sbjct: 2    ASISKLAFNDCRMQRFDALHNR-NFHFSPGKLQSHLDVRGKLCLSDSRRRSLVVAQSMLL 60

Query: 1469 NPIHAFSSP--IVQTSRSHQVLCKAEADLSGN-VPSSTPSGLSQYENIIETLTTLFPLWV 1299
             P+ + +SP  +  TSR  Q+LC+A +D+SG  VP  +P G+S YE +IETLTTLFP+WV
Sbjct: 61   KPLVSSASPCAVRVTSRKLQILCEAASDVSGEIVPGDSPDGMSTYERVIETLTTLFPVWV 120

Query: 1298 ILGTIIGIYKPSAVTWLQTDLFTVGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQY 1119
            ILGTI+GIYKP+AVTWL+TDLFTVGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQY
Sbjct: 121  ILGTILGIYKPAAVTWLETDLFTVGLGFLMLSMGLTLTFEDFRRCLRNPWTVGVGFLAQY 180

Query: 1118 IIKPILGFLIAMSMKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIG 939
            +IKP+LGF+IAM++KLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIG
Sbjct: 181  LIKPMLGFVIAMTLKLSAPLATGLILVSCCPGGQASNVATYISKGNVALSVLMTTCSTIG 240

Query: 938  AIIMTPLLTKLLAGQLVPVDAAGLALSTFQVVLLPTIVGVLANEYFPKFTSKIIAVTPLI 759
            AIIMTPLLTK+LAGQLVPVDAAGLA+STFQVVL+PT+VGVLANE+FPKFTSKII VTPLI
Sbjct: 241  AIIMTPLLTKILAGQLVPVDAAGLAISTFQVVLVPTVVGVLANEFFPKFTSKIITVTPLI 300

Query: 758  GVILTTLLCASPIGQVADVLKTQGVQLIIPVALLHAAAFALGYFFSKISFGESTSRTISI 579
            GVILTTLLCASPIGQVADVLKTQG QL++PVA+LH AAFALGY+ SK+SFGESTSRTISI
Sbjct: 301  GVILTTLLCASPIGQVADVLKTQGAQLLLPVAILHGAAFALGYWLSKLSFGESTSRTISI 360

Query: 578  ECGMQSSALGFLLAQKHFTNXXXXXXXXXXXVCMALGGSALAVFWRNRPISADDKDDFKE 399
            ECGMQSSALGFLLAQKHFTN           VCMALGGSALAVFWRN PI ADDKDDFKE
Sbjct: 361  ECGMQSSALGFLLAQKHFTNPLVAVPSAVSVVCMALGGSALAVFWRNMPIPADDKDDFKE 420


>ref|NP_850089.1| Sodium bile acid symporter-like protein [Arabidopsis thaliana]
            gi|122178084|sp|Q1EBV7.1|BASS2_ARATH RecName:
            Full=Sodium/pyruvate cotransporter BASS2, chloroplastic;
            AltName: Full=Bile acid transporter 1; AltName: Full=Bile
            acid-sodium symporter family protein 2; Flags: Precursor
            gi|109134135|gb|ABG25066.1| At2g26900 [Arabidopsis
            thaliana] gi|330252811|gb|AEC07905.1| Sodium bile acid
            symporter-like protein [Arabidopsis thaliana]
          Length = 409

 Score =  587 bits (1514), Expect = e-165
 Identities = 307/387 (79%), Positives = 335/387 (86%), Gaps = 9/387 (2%)
 Frame = -3

Query: 1532 TTRLPTNL-----ADMRRNVVKCSLQN--PIHAFSSPI--VQTSRSHQVLCKAEADLSGN 1380
            TTR  T+L       +  + +   +QN  PI    SP+  ++ + S +V+CKA A +SG+
Sbjct: 27   TTRTQTHLDFPKLVSVSNSGISLRIQNSKPI----SPVFALEATSSRRVVCKAAAGVSGD 82

Query: 1379 VPSSTPSGLSQYENIIETLTTLFPLWVILGTIIGIYKPSAVTWLQTDLFTVGLGFLMLSM 1200
            +P STP  LSQYE IIE LTTLFPLWVILGT++GI+KPS VTWL+TDLFT+GLGFLMLSM
Sbjct: 83   LPESTPKELSQYEKIIELLTTLFPLWVILGTLVGIFKPSLVTWLETDLFTLGLGFLMLSM 142

Query: 1199 GLTLTFEDFRRCLRNPWTVGVGFLAQYIIKPILGFLIAMSMKLSAPLATGLILVSCCPGG 1020
            GLTLTFEDFRRCLRNPWTVGVGFLAQY+IKPILGFLIAM++KLSAPLATGLILVSCCPGG
Sbjct: 143  GLTLTFEDFRRCLRNPWTVGVGFLAQYMIKPILGFLIAMTLKLSAPLATGLILVSCCPGG 202

Query: 1019 QASNVATYISKGNVALSVLMTTCSTIGAIIMTPLLTKLLAGQLVPVDAAGLALSTFQVVL 840
            QASNVATYISKGNVALSVLMTTCSTIGAIIMTPLLTKLLAGQLVPVDAAGLALSTFQVVL
Sbjct: 203  QASNVATYISKGNVALSVLMTTCSTIGAIIMTPLLTKLLAGQLVPVDAAGLALSTFQVVL 262

Query: 839  LPTIVGVLANEYFPKFTSKIIAVTPLIGVILTTLLCASPIGQVADVLKTQGVQLIIPVAL 660
            +PTI+GVLANE+FPKFTSKII VTPLIGVILTTLLCASPIGQVADVLKTQG QLI+PVAL
Sbjct: 263  VPTIIGVLANEFFPKFTSKIITVTPLIGVILTTLLCASPIGQVADVLKTQGAQLILPVAL 322

Query: 659  LHAAAFALGYFFSKISFGESTSRTISIECGMQSSALGFLLAQKHFTNXXXXXXXXXXXVC 480
            LHAAAFA+GY+ SK SFGESTSRTISIECGMQSSALGFLLAQKHFTN           VC
Sbjct: 323  LHAAAFAIGYWISKFSFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAVPSAVSVVC 382

Query: 479  MALGGSALAVFWRNRPISADDKDDFKE 399
            MALGGS LAVFWRN PI ADDKDDFKE
Sbjct: 383  MALGGSGLAVFWRNLPIPADDKDDFKE 409


>gb|AAM18095.1|AF498303_1 putative sodium-dependent bile acid symporter [Arabidopsis thaliana]
          Length = 409

 Score =  586 bits (1510), Expect = e-165
 Identities = 306/387 (79%), Positives = 335/387 (86%), Gaps = 9/387 (2%)
 Frame = -3

Query: 1532 TTRLPTNL-----ADMRRNVVKCSLQN--PIHAFSSPI--VQTSRSHQVLCKAEADLSGN 1380
            TTR  T+L       +  + +   +QN  PI    SP+  ++ + S +V+CKA A +SG+
Sbjct: 27   TTRTQTHLDFPKLVSVSNSGISLRIQNSKPI----SPVFALEATSSRRVVCKAAAGVSGD 82

Query: 1379 VPSSTPSGLSQYENIIETLTTLFPLWVILGTIIGIYKPSAVTWLQTDLFTVGLGFLMLSM 1200
            +P STP  LSQYE IIE LTTLFPLWVILGT++GI+KPS VTWL+TDLF++GLGFLMLSM
Sbjct: 83   LPESTPKELSQYEKIIELLTTLFPLWVILGTLVGIFKPSLVTWLETDLFSLGLGFLMLSM 142

Query: 1199 GLTLTFEDFRRCLRNPWTVGVGFLAQYIIKPILGFLIAMSMKLSAPLATGLILVSCCPGG 1020
            GLTLTFEDFRRCLRNPWTVGVGFLAQY+IKPILGFLIAM++KLSAPLATGLILVSCCPGG
Sbjct: 143  GLTLTFEDFRRCLRNPWTVGVGFLAQYMIKPILGFLIAMTLKLSAPLATGLILVSCCPGG 202

Query: 1019 QASNVATYISKGNVALSVLMTTCSTIGAIIMTPLLTKLLAGQLVPVDAAGLALSTFQVVL 840
            QASNVATYISKGNVALSVLMTTCSTIGAIIMTPLLTKLLAGQLVPVDAAGLALSTFQVVL
Sbjct: 203  QASNVATYISKGNVALSVLMTTCSTIGAIIMTPLLTKLLAGQLVPVDAAGLALSTFQVVL 262

Query: 839  LPTIVGVLANEYFPKFTSKIIAVTPLIGVILTTLLCASPIGQVADVLKTQGVQLIIPVAL 660
            +PTI+GVLANE+FPKFTSKII VTPLIGVILTTLLCASPIGQVADVLKTQG QLI+PVAL
Sbjct: 263  VPTIIGVLANEFFPKFTSKIITVTPLIGVILTTLLCASPIGQVADVLKTQGAQLILPVAL 322

Query: 659  LHAAAFALGYFFSKISFGESTSRTISIECGMQSSALGFLLAQKHFTNXXXXXXXXXXXVC 480
            LHAAAFA+GY+ SK SFGESTSRTISIECGMQSSALGFLLAQKHFTN           VC
Sbjct: 323  LHAAAFAIGYWISKFSFGESTSRTISIECGMQSSALGFLLAQKHFTNPLVAVPSAVSVVC 382

Query: 479  MALGGSALAVFWRNRPISADDKDDFKE 399
            MALGGS LAVFWRN PI ADDKDDFKE
Sbjct: 383  MALGGSGLAVFWRNLPIPADDKDDFKE 409


Top