BLASTX nr result

ID: Coptis24_contig00004038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004038
         (1457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273425.1| PREDICTED: mRNA-decapping enzyme-like protei...   389   e-105
ref|XP_003540254.1| PREDICTED: mRNA-decapping enzyme-like protei...   384   e-104
ref|NP_001239626.1| uncharacterized protein LOC100783361 [Glycin...   382   e-103
ref|XP_003596866.1| mRNA-decapping enzyme-like protein [Medicago...   379   e-102
ref|XP_002313607.1| predicted protein [Populus trichocarpa] gi|2...   378   e-102

>ref|XP_002273425.1| PREDICTED: mRNA-decapping enzyme-like protein [Vitis vinifera]
            gi|296084878|emb|CBI28287.3| unnamed protein product
            [Vitis vinifera]
          Length = 369

 Score =  389 bits (998), Expect = e-105
 Identities = 217/369 (58%), Positives = 242/369 (65%), Gaps = 4/369 (1%)
 Frame = +1

Query: 109  GKLMPNLDQQSTKILNLTVLQRIDPFVEEILITAAHVTFYEFNIDLNQWSRKDVEGSLFV 288
            GKLMPNLDQQSTKILNLTVLQRIDPFVEEILITAAHVTFYEFNIDL+QWSRKDVEGSLFV
Sbjct: 5    GKLMPNLDQQSTKILNLTVLQRIDPFVEEILITAAHVTFYEFNIDLSQWSRKDVEGSLFV 64

Query: 289  VKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNPRECE 468
            VKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYN RECE
Sbjct: 65   VKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNARECE 124

Query: 469  DVANLFSRILNAYXXXXXXXXXXXXXXEFEELEAVPTMAVMEGPLEPTSSTSSAVANVPD 648
            +VANLF+RILNAY              EFEELEAVPTMAVM+GPLEP+SSTSS VA+VPD
Sbjct: 125  EVANLFTRILNAYSKVPPKTKVSSTKSEFEELEAVPTMAVMDGPLEPSSSTSSNVADVPD 184

Query: 649  DSPFVNFFSAAMNIGNTSNAVIPGQHQHPPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXA 828
            D  FVNFFS A+ IGN S+  + GQ     A                            +
Sbjct: 185  DPSFVNFFSEAVTIGNASSVAVTGQPYQSSATPPLPSCPPNAIPGTVPTLQLASPPQSTS 244

Query: 829  TPRMPLLDI--PDLSGNHAANLVKXXXXXXXXXXXXXLMVAQTSSSMTXXXXXXXXXXXX 1002
            T  +PLLD   P  + N   NLVK             +M   +S+  T            
Sbjct: 245  TSLIPLLDTSQPISTSNRTTNLVKPSSFFGPPSSSPLMMPPLSSAMPT-----APPLHPP 299

Query: 1003 VNLQRPYG--XXXXXXXXXXXXXXXXXXXXXXNYGPVISKDKVREALMRVLQKDEFIDMF 1176
            V LQRPYG                        NYGPVI++DKVREAL+ ++Q ++FIDM 
Sbjct: 300  VTLQRPYGAPMLQPFPPPTPPPSLTPTSMPAPNYGPVITRDKVREALLMLVQDNQFIDMV 359

Query: 1177 YQELLNAHY 1203
            ++ LLNAH+
Sbjct: 360  HRALLNAHH 368


>ref|XP_003540254.1| PREDICTED: mRNA-decapping enzyme-like protein-like [Glycine max]
          Length = 366

 Score =  384 bits (987), Expect = e-104
 Identities = 220/368 (59%), Positives = 245/368 (66%), Gaps = 4/368 (1%)
 Frame = +1

Query: 109  GKLMPNLDQQSTKILNLTVLQRIDPFVEEILITAAHVTFYEFNIDLNQWSRKDVEGSLFV 288
            GKLMPNLDQ STK+LNLTVLQRIDPFVEEILITAAHVTFYEFNIDL+QWSRKDVEGSLFV
Sbjct: 5    GKLMPNLDQHSTKLLNLTVLQRIDPFVEEILITAAHVTFYEFNIDLSQWSRKDVEGSLFV 64

Query: 289  VKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNPRECE 468
            VKRNTQPRFQFIVMNRRNT+NLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYN RECE
Sbjct: 65   VKRNTQPRFQFIVMNRRNTENLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNARECE 124

Query: 469  DVANLFSRILNAYXXXXXXXXXXXXXXEFEELEAVPTMAVMEGPLEPTSSTSSAVANVPD 648
            +VANLFSRILNAY              EFEELEAVPTMAV++GPLEP+SST+S VA+VPD
Sbjct: 125  EVANLFSRILNAYAKVPPKSKVSSTKSEFEELEAVPTMAVIDGPLEPSSSTTSNVADVPD 184

Query: 649  DSPFVNFFSAAMNIGNTSNAVIPGQHQHPPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXA 828
            D  FVNFFSAAM IGNTSNA I GQ     A                            +
Sbjct: 185  DPSFVNFFSAAMAIGNTSNAPINGQPCQSSATISSSSVPTNAATPTVPTLQIPTLSA--S 242

Query: 829  TPRMPLLDIPDL--SGNHAANLVKXXXXXXXXXXXXXLMVAQTSSSMTXXXXXXXXXXXX 1002
            TP +P LD  +L  S N  A LVK             +M+   SSS              
Sbjct: 243  TPLIPQLDAAELISSSNRTAKLVKPSFFVPPPSSA--MMIPPVSSSTPSAPPLHPA---- 296

Query: 1003 VNLQRPYGXXXXXXXXXXXXXXXXXXXXXXN--YGPVISKDKVREALMRVLQKDEFIDMF 1176
            VN+QRPYG                      +  YGPVIS++KVR+AL+ ++Q ++FIDM 
Sbjct: 297  VNVQRPYGAPLLQPFPPPNPPPSLAPAPSPSPSYGPVISREKVRDALLVLVQDNQFIDMV 356

Query: 1177 YQELLNAH 1200
            Y+ LLNAH
Sbjct: 357  YRALLNAH 364


>ref|NP_001239626.1| uncharacterized protein LOC100783361 [Glycine max]
            gi|255636473|gb|ACU18575.1| unknown [Glycine max]
            gi|255641041|gb|ACU20800.1| unknown [Glycine max]
          Length = 368

 Score =  382 bits (981), Expect = e-103
 Identities = 222/385 (57%), Positives = 243/385 (63%), Gaps = 21/385 (5%)
 Frame = +1

Query: 109  GKLMPNLDQQSTKILNLTVLQRIDPFVEEILITAAHVTFYEFNIDLNQWSRKDVEGSLFV 288
            GKLMPNLDQ STK+LNLTVLQRIDPFVEEILITAAHVTFYEFNIDL+QWSRKDVEGSLFV
Sbjct: 5    GKLMPNLDQHSTKLLNLTVLQRIDPFVEEILITAAHVTFYEFNIDLSQWSRKDVEGSLFV 64

Query: 289  VKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNPRECE 468
            VKRNTQPRFQFIVMNRRNT+NLVENLLGDFEYEVQ+PYLLYRNAAQEVNGIWFYN RECE
Sbjct: 65   VKRNTQPRFQFIVMNRRNTENLVENLLGDFEYEVQIPYLLYRNAAQEVNGIWFYNARECE 124

Query: 469  DVANLFSRILNAYXXXXXXXXXXXXXXEFEELEAVPTMAVMEGPLEPTSSTSSAVANVPD 648
            +VANLFSRILNAY              EFEELEAVPTMAVM+GPLEP+SST+S VA+VPD
Sbjct: 125  EVANLFSRILNAYAKVPPKSKVSSTKSEFEELEAVPTMAVMDGPLEPSSSTTSNVADVPD 184

Query: 649  DSPFVNFFSAAMNIGNTSNAVIPGQHQHPPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXA 828
            D  FVNFFSAAM IGNTSN  I GQ     AA                           A
Sbjct: 185  DPSFVNFFSAAMAIGNTSNTPITGQPYQSSAA-----------------ISSSSVPTHTA 227

Query: 829  TPRMPLLDIPDL-----------------SGNHAANLVKXXXXXXXXXXXXXLMVAQTSS 957
            TP +P L IP L                 S N  A LVK             +M+   SS
Sbjct: 228  TPTVPTLQIPSLSQSTPLIPPLDAVESICSSNRTAKLVK--PSFFVPPPSSAMMIPPVSS 285

Query: 958  SMTXXXXXXXXXXXXVNLQRPYG----XXXXXXXXXXXXXXXXXXXXXXNYGPVISKDKV 1125
            S              VN+ RPYG                          NYG VIS++KV
Sbjct: 286  S----TPTAPPLHPAVNVHRPYGAPLLQPFPPPNPPLSLAPAASPSSSPNYGSVISREKV 341

Query: 1126 REALMRVLQKDEFIDMFYQELLNAH 1200
            R+ALM ++Q ++FIDM Y+ LLNAH
Sbjct: 342  RDALMVLVQDNQFIDMVYRALLNAH 366


>ref|XP_003596866.1| mRNA-decapping enzyme-like protein [Medicago truncatula]
            gi|355485914|gb|AES67117.1| mRNA-decapping enzyme-like
            protein [Medicago truncatula]
          Length = 366

 Score =  379 bits (973), Expect = e-102
 Identities = 213/366 (58%), Positives = 240/366 (65%), Gaps = 2/366 (0%)
 Frame = +1

Query: 109  GKLMPNLDQQSTKILNLTVLQRIDPFVEEILITAAHVTFYEFNIDLNQWSRKDVEGSLFV 288
            GKLMPNLDQQSTK+LNLTVLQRIDPFVEEILITAAHVTFYEFNIDL+QWSRKDVEGSLFV
Sbjct: 5    GKLMPNLDQQSTKLLNLTVLQRIDPFVEEILITAAHVTFYEFNIDLSQWSRKDVEGSLFV 64

Query: 289  VKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNPRECE 468
            VKRNTQPRFQFIVMNRRNT+NLVENLLGDFEYE+QVPYLLYRNAAQEVNGIWFYN RECE
Sbjct: 65   VKRNTQPRFQFIVMNRRNTENLVENLLGDFEYEIQVPYLLYRNAAQEVNGIWFYNARECE 124

Query: 469  DVANLFSRILNAYXXXXXXXXXXXXXXEFEELEAVPTMAVMEGPLEPTSSTSSAVANVPD 648
            +VANLFSRILNAY              EFEELEAVPTMAVM+GPLEP+SS +S VA+VPD
Sbjct: 125  EVANLFSRILNAYAKVPPKLKVSSTKSEFEELEAVPTMAVMDGPLEPSSSITSNVADVPD 184

Query: 649  DSPFVNFFSAAMNIGNTSNAVIPGQHQHPPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXA 828
            D  F+NFFSAAM IGNTSNA I GQ  +  +A                           +
Sbjct: 185  DPSFINFFSAAMGIGNTSNAPITGQ-PYQSSATISSSGPTHAATPVVPLPTLQIPSLPTS 243

Query: 829  TPRMPLLDIPDL--SGNHAANLVKXXXXXXXXXXXXXLMVAQTSSSMTXXXXXXXXXXXX 1002
            TP  P  D P+   S + A NLVK             +M   +SS  T            
Sbjct: 244  TPFTPQHDAPESINSSSQATNLVKPSFFVPPLSSAAMMMPPVSSSIPTAPPLHPTG---- 299

Query: 1003 VNLQRPYGXXXXXXXXXXXXXXXXXXXXXXNYGPVISKDKVREALMRVLQKDEFIDMFYQ 1182
              +QRPYG                         P IS++KVR+AL+ ++Q ++FIDM Y+
Sbjct: 300  -TVQRPYGTPMLQPFPPPTPPPSLAPVSSPLPNPAISREKVRDALLVLVQDNQFIDMVYK 358

Query: 1183 ELLNAH 1200
             LLNAH
Sbjct: 359  ALLNAH 364


>ref|XP_002313607.1| predicted protein [Populus trichocarpa] gi|222850015|gb|EEE87562.1|
            predicted protein [Populus trichocarpa]
          Length = 369

 Score =  378 bits (971), Expect = e-102
 Identities = 214/371 (57%), Positives = 239/371 (64%), Gaps = 6/371 (1%)
 Frame = +1

Query: 109  GKLMPNLDQQSTKILNLTVLQRIDPFVEEILITAAHVTFYEFNIDLNQWSRKDVEGSLFV 288
            GKLMPN+DQQSTK+LNLTVLQRIDP VEEILITAAHVT Y+FNIDL QWSRKDVEGSLFV
Sbjct: 5    GKLMPNIDQQSTKLLNLTVLQRIDPLVEEILITAAHVTLYQFNIDLTQWSRKDVEGSLFV 64

Query: 289  VKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNPRECE 468
            VKRN QPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYN RECE
Sbjct: 65   VKRNMQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNARECE 124

Query: 469  DVANLFSRILNAY--XXXXXXXXXXXXXXEFEELEAVPTMAVMEGPLEPTSSTSSAVANV 642
            +VANLFSRILNAY                EFEELEAVPTMAVM+GPLEP+S+++S V++V
Sbjct: 125  EVANLFSRILNAYSKVPQKPKVSLSTTKSEFEELEAVPTMAVMDGPLEPSSASASVVSDV 184

Query: 643  PDDSPFVNFFSAAMNIGNTSNAVIPGQHQHPPAAXXXXXXXXXXXXXXXXXXXXXXXXXX 822
            PDD  FVNFFS AM IGN S A + GQ                                 
Sbjct: 185  PDDPAFVNFFSTAMTIGNASAAAVAGQSYQSSIPIPLHSQLTSVASSTMPTLQIPSTPLS 244

Query: 823  XATPRMPLLDIPDL--SGNHAANLVKXXXXXXXXXXXXXLMVAQTSSSMTXXXXXXXXXX 996
             + P MPLLD+ D+  S N  ANLVK              M+   SSSM           
Sbjct: 245  ASIPLMPLLDVSDVSSSNNRTANLVKPSFFVPPSSTR---MMPPVSSSM----PTAPPLN 297

Query: 997  XXVNLQRPYG--XXXXXXXXXXXXXXXXXXXXXXNYGPVISKDKVREALMRVLQKDEFID 1170
               +L RPYG                        N+GPVISKDKVR+AL+ ++Q D+FID
Sbjct: 298  PPTSLHRPYGAPLLQPFPPPTPPPSLTPASVPSPNHGPVISKDKVRDALLALVQDDQFID 357

Query: 1171 MFYQELLNAHY 1203
            M Y+ LLNAH+
Sbjct: 358  MVYRTLLNAHH 368


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