BLASTX nr result
ID: Coptis24_contig00004033
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004033 (1262 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003528752.1| PREDICTED: chlorophyll a-b binding protein 7... 427 e-117 ref|XP_003528751.1| PREDICTED: chlorophyll a-b binding protein 7... 427 e-117 sp|P13869.1|CB12_PETHY RecName: Full=Chlorophyll a-b binding pro... 425 e-116 ref|XP_003548019.1| PREDICTED: chlorophyll a-b binding protein 7... 425 e-116 ref|XP_003548018.1| PREDICTED: chlorophyll a-b binding protein 7... 425 e-116 >ref|XP_003528752.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like isoform 2 [Glycine max] Length = 281 Score = 427 bits (1097), Expect = e-117 Identities = 198/242 (81%), Positives = 208/242 (85%) Frame = +3 Query: 213 ATKASFLVGRKLKQTKFVASAGPSTLSVRAAAAESDRPLWFPGSTPPPWLDGSLPGDFGF 392 +TKASFL GRKLK F A G + + A AE DRPLWFPGSTPPPWLDGSLPGDFGF Sbjct: 40 STKASFLSGRKLKVNSFTAPVGARSSTTVCAVAEPDRPLWFPGSTPPPWLDGSLPGDFGF 99 Query: 393 DPLGLGSDPETLRWNAQSELVHCRWAMLGAAGIFIPELLTKFGVLNTPSWYSAGEQEYFT 572 DPLGLGSDPE+LRWN Q+ELVHCRWAMLGAAGIFIPE LTK G+LNTPSWY+AGE EYFT Sbjct: 100 DPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFT 159 Query: 573 DTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGFG 752 DTTTLF+VE+ FIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLG+G Sbjct: 160 DTTTLFVVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG 219 Query: 753 SGSAXXXXXXXXXXXXNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFQAFT 932 SGS NGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIF AFT Sbjct: 220 SGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFT 279 Query: 933 PK 938 PK Sbjct: 280 PK 281 >ref|XP_003528751.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like isoform 1 [Glycine max] Length = 270 Score = 427 bits (1097), Expect = e-117 Identities = 198/242 (81%), Positives = 208/242 (85%) Frame = +3 Query: 213 ATKASFLVGRKLKQTKFVASAGPSTLSVRAAAAESDRPLWFPGSTPPPWLDGSLPGDFGF 392 +TKASFL GRKLK F A G + + A AE DRPLWFPGSTPPPWLDGSLPGDFGF Sbjct: 29 STKASFLSGRKLKVNSFTAPVGARSSTTVCAVAEPDRPLWFPGSTPPPWLDGSLPGDFGF 88 Query: 393 DPLGLGSDPETLRWNAQSELVHCRWAMLGAAGIFIPELLTKFGVLNTPSWYSAGEQEYFT 572 DPLGLGSDPE+LRWN Q+ELVHCRWAMLGAAGIFIPE LTK G+LNTPSWY+AGE EYFT Sbjct: 89 DPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFT 148 Query: 573 DTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGFG 752 DTTTLF+VE+ FIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLG+G Sbjct: 149 DTTTLFVVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG 208 Query: 753 SGSAXXXXXXXXXXXXNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFQAFT 932 SGS NGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIF AFT Sbjct: 209 SGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFT 268 Query: 933 PK 938 PK Sbjct: 269 PK 270 >sp|P13869.1|CB12_PETHY RecName: Full=Chlorophyll a-b binding protein, chloroplastic; AltName: Full=LHCI type II CAB; Flags: Precursor gi|169214|gb|AAA33711.1| chlorophyll binding protein precursor [Petunia x hybrida] gi|226259|prf||1503272A chlorophyll binding protein Length = 270 Score = 425 bits (1092), Expect = e-116 Identities = 195/242 (80%), Positives = 214/242 (88%) Frame = +3 Query: 213 ATKASFLVGRKLKQTKFVASAGPSTLSVRAAAAESDRPLWFPGSTPPPWLDGSLPGDFGF 392 ATKASFL G++L+ +KF+A G +++V A AA+ DRPLWFPGSTPP WLDGSLPGDFGF Sbjct: 29 ATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGF 88 Query: 393 DPLGLGSDPETLRWNAQSELVHCRWAMLGAAGIFIPELLTKFGVLNTPSWYSAGEQEYFT 572 DPLGLGSDPE+L+WNAQ+ELVH RWAMLGAAGIFIPE LTK GVLNTPSWY+AGEQEYFT Sbjct: 89 DPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFT 148 Query: 573 DTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGFG 752 DTTTLF++E++ IGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLG+G Sbjct: 149 DTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG 208 Query: 753 SGSAXXXXXXXXXXXXNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFQAFT 932 SGS NGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIF AF+ Sbjct: 209 SGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268 Query: 933 PK 938 PK Sbjct: 269 PK 270 >ref|XP_003548019.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like isoform 2 [Glycine max] Length = 281 Score = 425 bits (1092), Expect = e-116 Identities = 198/242 (81%), Positives = 207/242 (85%) Frame = +3 Query: 213 ATKASFLVGRKLKQTKFVASAGPSTLSVRAAAAESDRPLWFPGSTPPPWLDGSLPGDFGF 392 +TKASFL GRKLK F A G + + A AE DRPLWFPGSTPPPWLDGSLPGDFGF Sbjct: 40 STKASFLSGRKLKVNNFTAPVGARSSTTVCAVAEPDRPLWFPGSTPPPWLDGSLPGDFGF 99 Query: 393 DPLGLGSDPETLRWNAQSELVHCRWAMLGAAGIFIPELLTKFGVLNTPSWYSAGEQEYFT 572 DPLGL SDPE+LRWN Q+ELVHCRWAMLGAAGIFIPE LTK G+LNTPSWY+AGE EYFT Sbjct: 100 DPLGLASDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFT 159 Query: 573 DTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGFG 752 DTTTLFIVE+ FIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLG+G Sbjct: 160 DTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG 219 Query: 753 SGSAXXXXXXXXXXXXNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFQAFT 932 SGS NGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIF AFT Sbjct: 220 SGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFT 279 Query: 933 PK 938 PK Sbjct: 280 PK 281 >ref|XP_003548018.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like isoform 1 [Glycine max] gi|255645717|gb|ACU23352.1| unknown [Glycine max] Length = 270 Score = 425 bits (1092), Expect = e-116 Identities = 198/242 (81%), Positives = 207/242 (85%) Frame = +3 Query: 213 ATKASFLVGRKLKQTKFVASAGPSTLSVRAAAAESDRPLWFPGSTPPPWLDGSLPGDFGF 392 +TKASFL GRKLK F A G + + A AE DRPLWFPGSTPPPWLDGSLPGDFGF Sbjct: 29 STKASFLSGRKLKVNNFTAPVGARSSTTVCAVAEPDRPLWFPGSTPPPWLDGSLPGDFGF 88 Query: 393 DPLGLGSDPETLRWNAQSELVHCRWAMLGAAGIFIPELLTKFGVLNTPSWYSAGEQEYFT 572 DPLGL SDPE+LRWN Q+ELVHCRWAMLGAAGIFIPE LTK G+LNTPSWY+AGE EYFT Sbjct: 89 DPLGLASDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFT 148 Query: 573 DTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGFG 752 DTTTLFIVE+ FIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLG+G Sbjct: 149 DTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWG 208 Query: 753 SGSAXXXXXXXXXXXXNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFQAFT 932 SGS NGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIF AFT Sbjct: 209 SGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFT 268 Query: 933 PK 938 PK Sbjct: 269 PK 270