BLASTX nr result
ID: Coptis24_contig00004030
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004030 (228 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002515525.1| dead box ATP-dependent RNA helicase, putativ... 115 5e-24 ref|XP_002337696.1| predicted protein [Populus trichocarpa] gi|2... 115 5e-24 ref|XP_002324856.1| predicted protein [Populus trichocarpa] gi|2... 115 5e-24 ref|XP_002309623.1| predicted protein [Populus trichocarpa] gi|2... 115 5e-24 gb|ABK93079.1| unknown [Populus trichocarpa] 115 5e-24 >ref|XP_002515525.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] gi|223545469|gb|EEF46974.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] Length = 275 Score = 115 bits (287), Expect = 5e-24 Identities = 55/59 (93%), Positives = 58/59 (98%) Frame = -3 Query: 178 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSAGQVVVLVLCHTRELAYQI 2 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP++GQV+ LVLCHTRELAYQI Sbjct: 73 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIALVLCHTRELAYQI 131 >ref|XP_002337696.1| predicted protein [Populus trichocarpa] gi|222869567|gb|EEF06698.1| predicted protein [Populus trichocarpa] Length = 247 Score = 115 bits (287), Expect = 5e-24 Identities = 55/59 (93%), Positives = 58/59 (98%) Frame = -3 Query: 178 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSAGQVVVLVLCHTRELAYQI 2 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP++GQV+ LVLCHTRELAYQI Sbjct: 73 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIALVLCHTRELAYQI 131 >ref|XP_002324856.1| predicted protein [Populus trichocarpa] gi|222866290|gb|EEF03421.1| predicted protein [Populus trichocarpa] Length = 428 Score = 115 bits (287), Expect = 5e-24 Identities = 55/59 (93%), Positives = 58/59 (98%) Frame = -3 Query: 178 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSAGQVVVLVLCHTRELAYQI 2 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP++GQV+ LVLCHTRELAYQI Sbjct: 73 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIALVLCHTRELAYQI 131 >ref|XP_002309623.1| predicted protein [Populus trichocarpa] gi|222855599|gb|EEE93146.1| predicted protein [Populus trichocarpa] Length = 428 Score = 115 bits (287), Expect = 5e-24 Identities = 55/59 (93%), Positives = 58/59 (98%) Frame = -3 Query: 178 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSAGQVVVLVLCHTRELAYQI 2 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP++GQV+ LVLCHTRELAYQI Sbjct: 73 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIALVLCHTRELAYQI 131 >gb|ABK93079.1| unknown [Populus trichocarpa] Length = 428 Score = 115 bits (287), Expect = 5e-24 Identities = 55/59 (93%), Positives = 58/59 (98%) Frame = -3 Query: 178 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSAGQVVVLVLCHTRELAYQI 2 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP++GQV+ LVLCHTRELAYQI Sbjct: 73 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIALVLCHTRELAYQI 131