BLASTX nr result

ID: Coptis24_contig00004030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004030
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515525.1| dead box ATP-dependent RNA helicase, putativ...   115   5e-24
ref|XP_002337696.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_002324856.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_002309623.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
gb|ABK93079.1| unknown [Populus trichocarpa]                          115   5e-24

>ref|XP_002515525.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223545469|gb|EEF46974.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 275

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/59 (93%), Positives = 58/59 (98%)
 Frame = -3

Query: 178 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSAGQVVVLVLCHTRELAYQI 2
           VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP++GQV+ LVLCHTRELAYQI
Sbjct: 73  VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIALVLCHTRELAYQI 131


>ref|XP_002337696.1| predicted protein [Populus trichocarpa] gi|222869567|gb|EEF06698.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/59 (93%), Positives = 58/59 (98%)
 Frame = -3

Query: 178 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSAGQVVVLVLCHTRELAYQI 2
           VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP++GQV+ LVLCHTRELAYQI
Sbjct: 73  VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIALVLCHTRELAYQI 131


>ref|XP_002324856.1| predicted protein [Populus trichocarpa] gi|222866290|gb|EEF03421.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/59 (93%), Positives = 58/59 (98%)
 Frame = -3

Query: 178 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSAGQVVVLVLCHTRELAYQI 2
           VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP++GQV+ LVLCHTRELAYQI
Sbjct: 73  VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIALVLCHTRELAYQI 131


>ref|XP_002309623.1| predicted protein [Populus trichocarpa] gi|222855599|gb|EEE93146.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/59 (93%), Positives = 58/59 (98%)
 Frame = -3

Query: 178 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSAGQVVVLVLCHTRELAYQI 2
           VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP++GQV+ LVLCHTRELAYQI
Sbjct: 73  VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIALVLCHTRELAYQI 131


>gb|ABK93079.1| unknown [Populus trichocarpa]
          Length = 428

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/59 (93%), Positives = 58/59 (98%)
 Frame = -3

Query: 178 VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSAGQVVVLVLCHTRELAYQI 2
           VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP++GQV+ LVLCHTRELAYQI
Sbjct: 73  VQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIALVLCHTRELAYQI 131


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