BLASTX nr result

ID: Coptis24_contig00004026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004026
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ83283.1| unknown [Medicago truncatula] gi|217072378|gb|ACJ...   102   6e-20
ref|NP_001237666.1| uncharacterized protein LOC100527548 [Glycin...    88   2e-15
emb|CAN74781.1| hypothetical protein VITISV_025062 [Vitis vinifera]    87   3e-15
ref|XP_002283255.1| PREDICTED: RING finger protein 126 [Vitis vi...    86   5e-15
gb|AFK38133.1| unknown [Lotus japonicus]                               85   1e-14

>gb|ACJ83283.1| unknown [Medicago truncatula] gi|217072378|gb|ACJ84549.1| unknown
           [Medicago truncatula] gi|388521239|gb|AFK48681.1|
           unknown [Medicago truncatula]
          Length = 161

 Score =  102 bits (254), Expect = 6e-20
 Identities = 59/165 (35%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
 Frame = +1

Query: 118 MAGMLPGVELAXXXXXXXXXXXXXXXXXYESSYSRELSVHQKIEPSTNMDETXXXXXXXX 297
           MAG LPGV L+                 Y  SY +E         +T +DET        
Sbjct: 1   MAGRLPGVGLSPRKRSEHYHNRHEHYATYRDSYLKESLDAPWTSMTTTLDETAFKAKQRL 60

Query: 298 XXXXXSFSAPSRFSKRLPSKGEKSFSHLTHVKETHTSTRRQGKQSFQL--DRKNSQREVC 471
                 F + SR S+  P K  K F      K+     R+  + S+ L  ++   +R++C
Sbjct: 61  QKKLGHFFSSSRSSEHNPKKEGKEFQ-----KKDAGLGRKLLESSWLLRGNKFKKERKIC 115

Query: 472 SICLEDFQAEQQIMNLPCCHKYHSDCLLPWLTTNSHCPYCRTNVN 606
           ++CLEDF  ++++MNL C HKYHS CLLPWL T+ HCPYCRT V+
Sbjct: 116 AVCLEDFLQDEEVMNLSCSHKYHSACLLPWLETHPHCPYCRTIVD 160


>ref|NP_001237666.1| uncharacterized protein LOC100527548 [Glycine max]
           gi|255632588|gb|ACU16644.1| unknown [Glycine max]
          Length = 166

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 58/166 (34%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
 Frame = +1

Query: 118 MAGMLPGVELAXXXXXXXXXXXXXXXXXY--ESSYSRELSVHQKIEPSTNMDETXXXXXX 291
           MAG LPGV L                     +S +  E S+     P T +DET      
Sbjct: 1   MAGRLPGVGLLARKRTEQNHRYEHQHHATCRQSYHLGESSLEPPWIPLTVLDETALKARQ 60

Query: 292 XXXXXXXSFSAPSRFSKRLPSKGEKSFSHLTHVKETHTSTRRQGKQSFQL--DRKNSQRE 465
                   F +  R S+    +G+ + S  ++ K+     R+  + S+ L  ++    R+
Sbjct: 61  RLHKKLGHFFSSYRSSENPRKEGKVNQS--SYEKKDGGIGRKLLESSWLLRGNKFKKDRK 118

Query: 466 VCSICLEDFQAEQQIMNLPCCHKYHSDCLLPWLTTNSHCPYCRTNV 603
           VC++CLED   EQQ+MNL C HKYHS CLLPWL  + HCPYCRT V
Sbjct: 119 VCAVCLEDLGQEQQVMNLSCSHKYHSACLLPWLAAHPHCPYCRTPV 164


>emb|CAN74781.1| hypothetical protein VITISV_025062 [Vitis vinifera]
          Length = 164

 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 57/165 (34%), Positives = 76/165 (46%), Gaps = 3/165 (1%)
 Frame = +1

Query: 118 MAGMLPGVELAXXXXXXXXXXXXXXXXXYESSYSRELSVHQKIEPSTNMDETXXXXXXXX 297
           MAG LPGV +                   E    RE   H     +  M ET        
Sbjct: 1   MAGTLPGVGVGSRRMSHHRHRQDDPLVFREPPPLRERLQHST---TVTMGETALMARQRL 57

Query: 298 XXXXXSFSAPSRFSKRLPSKGEKSFSHLTHVKE-THTSTRRQGKQ-SFQLDR-KNSQREV 468
                 + A SR SK+  + G +  +H    K  + T +   G+    QL+    S  E+
Sbjct: 58  DRKLAHYRASSRSSKQ-GANGSRESNHKERTKRNSSTGSXILGRPWKLQLNTGSKSNGEM 116

Query: 469 CSICLEDFQAEQQIMNLPCCHKYHSDCLLPWLTTNSHCPYCRTNV 603
           CS+CLEDF+ EQQ+M L C HKYHS+CL+PWL ++ HCP CR  V
Sbjct: 117 CSVCLEDFEGEQQMMELSCSHKYHSNCLMPWLASHPHCPTCRNPV 161


>ref|XP_002283255.1| PREDICTED: RING finger protein 126 [Vitis vinifera]
          Length = 164

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 3/165 (1%)
 Frame = +1

Query: 118 MAGMLPGVELAXXXXXXXXXXXXXXXXXYESSYSRELSVHQKIEPSTNMDETXXXXXXXX 297
           MAG LPGV +                   E    RE   H     +  M ET        
Sbjct: 1   MAGTLPGVGVGSRRMSHHRHRQDDPLVFREPPPLRERLQHST---TVTMGETALMARQRL 57

Query: 298 XXXXXSFSAPSRFSKRLPSKGEKSFSHLTHVKETHTSTRRQGKQSFQLDRKNSQR---EV 468
                 + A SR SK+  + G +  +H    K   +   +   + ++L      +   E+
Sbjct: 58  DRKLAHYRASSRSSKQ-GANGSRESNHKERTKRNSSIGSKILGRPWKLQLNTGSKSNGEM 116

Query: 469 CSICLEDFQAEQQIMNLPCCHKYHSDCLLPWLTTNSHCPYCRTNV 603
           CS+CLEDF+ EQQ+M L C HKYHS+CL+PWL ++ HCP CR  V
Sbjct: 117 CSVCLEDFEGEQQMMELSCSHKYHSNCLMPWLASHPHCPTCRNPV 161


>gb|AFK38133.1| unknown [Lotus japonicus]
          Length = 152

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 33/49 (67%), Positives = 41/49 (83%)
 Frame = +1

Query: 457 QREVCSICLEDFQAEQQIMNLPCCHKYHSDCLLPWLTTNSHCPYCRTNV 603
           +R+VC++CLEDFQ +QQ+MNL C HKYHS CLLPWL  + HCP CRT+V
Sbjct: 103 ERKVCAVCLEDFQQKQQVMNLSCSHKYHSACLLPWLEAHPHCPCCRTSV 151


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