BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004021
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR96002.1| retrotransposon-like protein [Musa acuminata]           98   7e-19
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]    88   2e-17
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]          92   6e-17
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]            89   4e-16
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]    87   1e-15

>gb|AAR96002.1| retrotransposon-like protein [Musa acuminata]
          Length = 521

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 43/55 (78%), Positives = 51/55 (92%)
 Frame = +1

Query: 1   RVFVHIPKDERSKFNDKAKQCIFLGYGDEKFGYKLYDPINKKVIRSRDVVFLEDQ 165
           + FVHIPKDERSK ++KAK CIFLGYG E+FGY+L+DP+NKK+IRSRDVVFLEDQ
Sbjct: 380 KAFVHIPKDERSKLDNKAKACIFLGYGHEEFGYRLWDPVNKKIIRSRDVVFLEDQ 434


>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
          Length = 1207

 Score = 87.8 bits (216), Expect(2) = 2e-17
 Identities = 35/57 (61%), Positives = 47/57 (82%)
 Frame = +1

Query: 1   RVFVHIPKDERSKFNDKAKQCIFLGYGDEKFGYKLYDPINKKVIRSRDVVFLEDQTI 171
           + FVHIPKDERSK + K + C+F+GYG ++ GY+ YDP+ KK++RSRDVVF+ED TI
Sbjct: 534 KAFVHIPKDERSKLDAKTRPCVFIGYGQDELGYRFYDPVQKKLVRSRDVVFMEDHTI 590



 Score = 25.8 bits (55), Expect(2) = 2e-17
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
 Frame = +2

Query: 272 TIADF*ESEKLQA-FTNDLVDSEP----EIPTVERAEG---------IENAENHEFEVHD 409
           TI D  ++  +++  + DL+D +P     +PT    E          +E     E E HD
Sbjct: 589 TIQDIEKTNPMESQHSGDLIDLDPAPLTNLPTQVEDEAHDDQHDMGDVETPTQVEDEAHD 648

Query: 410 ENPITHDGIEPIGIGDADEVHEPPP 484
           +     D   P  +   D+VHE  P
Sbjct: 649 DQHDMGDVETPTQVEVDDDVHEQSP 673


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 37/57 (64%), Positives = 50/57 (87%)
 Frame = +1

Query: 1   RVFVHIPKDERSKFNDKAKQCIFLGYGDEKFGYKLYDPINKKVIRSRDVVFLEDQTI 171
           + FVH+P+DERSK + K +QCIF+GYG ++FGY+LYDP+ KK++RSRDVVF E+QTI
Sbjct: 649 KAFVHVPRDERSKLDSKTRQCIFIGYGFDEFGYRLYDPVEKKLVRSRDVVFFENQTI 705


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 35/57 (61%), Positives = 48/57 (84%)
 Frame = +1

Query: 1   RVFVHIPKDERSKFNDKAKQCIFLGYGDEKFGYKLYDPINKKVIRSRDVVFLEDQTI 171
           + +VH+PKDERSK + K ++C+F+GYG +  GYK YDP+ KK++RSRDVVF+EDQTI
Sbjct: 651 KAYVHVPKDERSKLDVKTRECVFIGYGQDMLGYKFYDPVEKKLVRSRDVVFVEDQTI 707


>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
          Length = 1317

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 35/57 (61%), Positives = 47/57 (82%)
 Frame = +1

Query: 1   RVFVHIPKDERSKFNDKAKQCIFLGYGDEKFGYKLYDPINKKVIRSRDVVFLEDQTI 171
           + FVHIPKDERSK + K + C+F+GYG ++ GY+ YDP+ KK++RSRDVVF+ED TI
Sbjct: 602 KAFVHIPKDERSKLDVKTRPCVFIGYGQDELGYRFYDPVQKKLVRSRDVVFMEDHTI 658