BLASTX nr result

ID: Coptis24_contig00004006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004006
         (864 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269120.1| PREDICTED: uncharacterized protein LOC100259...   122   8e-26
emb|CAN68526.1| hypothetical protein VITISV_018084 [Vitis vinifera]   122   8e-26
ref|XP_003544041.1| PREDICTED: uncharacterized protein LOC100792...   117   3e-24
ref|XP_003541932.1| PREDICTED: uncharacterized protein LOC100820...   117   3e-24
ref|XP_004144253.1| PREDICTED: uncharacterized protein LOC101219...   109   7e-22

>ref|XP_002269120.1| PREDICTED: uncharacterized protein LOC100259118 [Vitis vinifera]
          Length = 293

 Score =  122 bits (307), Expect = 8e-26
 Identities = 83/221 (37%), Positives = 113/221 (51%), Gaps = 9/221 (4%)
 Frame = -3

Query: 760 INFGTQFRQTGRKYNGMYGDRSGGGEGIEFSAQ-NDESGVIXXXXXXXXXXXXXXXXXXX 584
           + FG + +++ R +   YG  +GG       A+  DESGV                    
Sbjct: 27  MRFGGRPQRSARNHEN-YGAWNGGDWQFGAEAKVEDESGVCSPPLWKTSPSGSPNGGNSP 85

Query: 583 LQSHTYNHHHYRLLSPTSRSQAIARGKEELMQMVKNMPETTYELSLKDLVEHSRIQGVGH 404
           L    ++ +HYR LSP SR QAIA+G+ ELM+MV+NMPE+ YELSLKDLVE   +Q    
Sbjct: 86  LHRR-HHQNHYRSLSPASRMQAIAQGQRELMEMVRNMPESCYELSLKDLVERPVVQAPQD 144

Query: 403 TTVVE----DTELXXXXXXXXXXXXXXXXXXXAILRSGSMDNGPFLLKMFIPIFLGRKKK 236
               +    D                       + RSGS+DNG FLLKM  P+    KKK
Sbjct: 145 PFPEKRNFGDEIATSREKKKVKDRKKKNDTKPKMGRSGSLDNGGFLLKMVFPVSFRLKKK 204

Query: 235 KSLITGTCAKVSPRPT----EGEKVDKDWWKKRLSGVGETD 125
           K+  T TC+KVSP+P       + VDK+WWKK+++  GE+D
Sbjct: 205 KNSATNTCSKVSPKPLASDGSAKSVDKEWWKKKVTVSGESD 245


>emb|CAN68526.1| hypothetical protein VITISV_018084 [Vitis vinifera]
          Length = 318

 Score =  122 bits (307), Expect = 8e-26
 Identities = 83/221 (37%), Positives = 113/221 (51%), Gaps = 9/221 (4%)
 Frame = -3

Query: 760 INFGTQFRQTGRKYNGMYGDRSGGGEGIEFSAQ-NDESGVIXXXXXXXXXXXXXXXXXXX 584
           + FG + +++ R +   YG  +GG       A+  DESGV                    
Sbjct: 52  MRFGGRPQRSARNHEN-YGAWNGGDWQFGAEAKVEDESGVCSPPLWKTSPSGSPNGGNSP 110

Query: 583 LQSHTYNHHHYRLLSPTSRSQAIARGKEELMQMVKNMPETTYELSLKDLVEHSRIQGVGH 404
           L    ++ +HYR LSP SR QAIA+G+ ELM+MV+NMPE+ YELSLKDLVE   +Q    
Sbjct: 111 LHRR-HHQNHYRSLSPASRMQAIAQGQRELMEMVRNMPESCYELSLKDLVERPVVQAPQD 169

Query: 403 TTVVE----DTELXXXXXXXXXXXXXXXXXXXAILRSGSMDNGPFLLKMFIPIFLGRKKK 236
               +    D                       + RSGS+DNG FLLKM  P+    KKK
Sbjct: 170 PFPEKRNFGDEIATSREKKKVKDRKKKNDTKPKMGRSGSLDNGGFLLKMVFPVSFRLKKK 229

Query: 235 KSLITGTCAKVSPRPT----EGEKVDKDWWKKRLSGVGETD 125
           K+  T TC+KVSP+P       + VDK+WWKK+++  GE+D
Sbjct: 230 KNSATNTCSKVSPKPLASDGSAKSVDKEWWKKKVTVSGESD 270


>ref|XP_003544041.1| PREDICTED: uncharacterized protein LOC100792746 [Glycine max]
          Length = 367

 Score =  117 bits (294), Expect = 3e-24
 Identities = 71/155 (45%), Positives = 94/155 (60%), Gaps = 6/155 (3%)
 Frame = -3

Query: 580 QSHTYNHHHYRLLSPTSRSQAIARGKEELMQMVKNMPETTYELSLKDLVEHSRIQGVGHT 401
           +S  +  ++YR LSP S++QAIARG+ ELM+MVKNMPE++YELSLKDLVEH R++     
Sbjct: 30  KSPHHRKNYYRCLSPASKTQAIARGQRELMEMVKNMPESSYELSLKDLVEHPRVEVAQEK 89

Query: 400 TVVEDTELXXXXXXXXXXXXXXXXXXXAILRSGSMDNGPFLLKMFIPIFLGRKKK---KS 230
              E  +L                    + RSG++D+G F LKM  PI LG KKK   +S
Sbjct: 90  GAEERKKL--GNKNVGNRKKVDMNKKGQVKRSGNIDSGGFYLKMVFPISLGFKKKTKNES 147

Query: 229 LITGTCAKVSPRP--TEGEK-VDKDWWKKRLSGVG 134
           L+     KVSPR   ++G K +DK+WWKK LS  G
Sbjct: 148 LVNSGSNKVSPRTSVSDGSKSLDKEWWKKSLSASG 182


>ref|XP_003541932.1| PREDICTED: uncharacterized protein LOC100820562 [Glycine max]
          Length = 293

 Score =  117 bits (294), Expect = 3e-24
 Identities = 69/150 (46%), Positives = 92/150 (61%), Gaps = 8/150 (5%)
 Frame = -3

Query: 559 HHYRLLSPTSRSQAIARGKEELMQMVKNMPETTYELSLKDLVEHSRIQGVGHTTVVEDTE 380
           +HYR LSP S++QAIARG+ ELM+MVK+MPE++YELSLKDLVEH R++ V      E+ +
Sbjct: 92  NHYRCLSPASKTQAIARGQRELMEMVKSMPESSYELSLKDLVEHPRVE-VAQEKGAEERK 150

Query: 379 LXXXXXXXXXXXXXXXXXXXAILRSGSMDNGPFLLKMFIPIFLGRKKK---KSLITGTCA 209
                                + RSG++D+G F LKM  PI LG KKK   +SL+     
Sbjct: 151 NLGDKNVDSRKKVDMNIKKGQVKRSGNIDSGGFYLKMVFPISLGSKKKTKNESLVNSGSN 210

Query: 208 KVSPRPTEGE----KVDKDWWKKR-LSGVG 134
           KVSPR +  +     +DK+WWKK+ LSG G
Sbjct: 211 KVSPRTSVSDHGSKSLDKEWWKKKSLSGSG 240


>ref|XP_004144253.1| PREDICTED: uncharacterized protein LOC101219576 [Cucumis sativus]
          Length = 267

 Score =  109 bits (273), Expect = 7e-22
 Identities = 70/160 (43%), Positives = 93/160 (58%), Gaps = 12/160 (7%)
 Frame = -3

Query: 568 YNHHHYRLLSPTSRSQAIARGKEELMQMVKNMPETTYELSLKDLVEH----SRIQGVGHT 401
           ++ H  R LSPTSR+QAIARG++ELM+MV+NMPE++YELSLKDLVEH    S+ Q  G  
Sbjct: 65  HHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQDGDV 124

Query: 400 TVVEDTELXXXXXXXXXXXXXXXXXXXAILRSGSMDNGPFLLKMFIPIFLGR---KKKKS 230
             +   +                     + RS S+D+G F LKMF P+  G+   KKK +
Sbjct: 125 ASLTRDDSSSETSFRRDPSKNRGETRALVTRSRSVDSGGFYLKMFFPLPFGQVSAKKKNN 184

Query: 229 LITGT----CAKVSPRPTEGEKVDKDWWKKRLS-GVGETD 125
           L T +     ++VSP+P     VDKDWW+KR S   GE D
Sbjct: 185 LRTDSGLSGSSRVSPKP---PPVDKDWWRKRSSVSGGEND 221


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