BLASTX nr result
ID: Coptis24_contig00004003
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00004003
(1986 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283433.2| PREDICTED: protein TIC 55, chloroplastic-lik... 824 0.0
ref|XP_003603276.1| Rieske iron-sulfur protein Tic55 [Medicago t... 822 0.0
sp|O49931.1|TIC55_PEA RecName: Full=Protein TIC 55, chloroplasti... 815 0.0
ref|XP_002515391.1| chlorophyll a oxygenase, putative [Ricinus c... 801 0.0
ref|XP_003522345.1| PREDICTED: pheophorbide a oxygenase, chlorop... 799 0.0
>ref|XP_002283433.2| PREDICTED: protein TIC 55, chloroplastic-like [Vitis vinifera]
gi|296082166|emb|CBI21171.3| unnamed protein product
[Vitis vinifera]
Length = 544
Score = 824 bits (2128), Expect = 0.0
Identities = 401/565 (70%), Positives = 456/565 (80%), Gaps = 1/565 (0%)
Frame = -2
Query: 1898 MALLQPFISDPSHLKTLLPF-TPLALNHTNSTTRRRNANELFISSPTILGLKVKLKQVRT 1722
MALLQPF+S L LP TPL+L +S L KL
Sbjct: 1 MALLQPFLSHSPPLSFSLPKPTPLSL----------------VSLSQSLKPPHKLLTQTW 44
Query: 1721 RVSHQYSAVAQEFGGEVLTDEEKGEDYDVLLESNVDEKEKVENETVEYDWREEWYPLYLT 1542
R S + A+A+ G L GED VL++ + E+ + E EYDW+EEWYPLYLT
Sbjct: 45 RDSIRCCAIAEIRDGVSLG----GEDQGVLVDPSSQEEVRGERHVAEYDWKEEWYPLYLT 100
Query: 1541 QNLPDDAPLGLTVYDKQIVLYRDGNGDFQCYQDRCPHRLAKLSEGQLVDGRLECLYHGWQ 1362
+++P+DAP+GLTV+DKQ+VLYRDG QCY+DRCPHRLAKLSEGQLVDGRLECLYHGWQ
Sbjct: 101 KDIPEDAPMGLTVFDKQLVLYRDGKDLLQCYEDRCPHRLAKLSEGQLVDGRLECLYHGWQ 160
Query: 1361 FEGKGKCVKIPQLPSGAKIPRNACVKTYEVRDSQGVIWVWMSDKNPPNPEKLPWFENFAR 1182
FEG+GKCVKIPQLP+ AKIPR+ACVKTYEV+DSQGV+WVWMS + PPNP+KLPWFENFAR
Sbjct: 161 FEGEGKCVKIPQLPADAKIPRSACVKTYEVKDSQGVVWVWMSHRTPPNPDKLPWFENFAR 220
Query: 1181 PGFQDISTTHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQALLFKVVERSNRGF 1002
PGF+D ST HELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQ L FKV ER++RGF
Sbjct: 221 PGFRDTSTIHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQPLCFKVTERTDRGF 280
Query: 1001 AGLWGREKDQTMPNYLRFDAPCVLQNNREIVDKNGEKHYSSGLFLCRPSGQGKSMLIVRF 822
AG WGREKD+++ N+LRF+APCVLQNNREIVDKNGEKHY +GLFLCRPSGQGKSMLIVRF
Sbjct: 281 AGWWGREKDESLLNFLRFEAPCVLQNNREIVDKNGEKHYFTGLFLCRPSGQGKSMLIVRF 340
Query: 821 GGTRRSSPLAKLFPMWYFHQNAGKVFEQDMGFLSSQNEILVKEKLPTKELYINLRSSDTW 642
G T+R SP+AKLFP WYFHQNAGKVFEQDMGFLSSQNEIL+KEK+PTKELY+NLRSSDTW
Sbjct: 341 GSTKR-SPIAKLFPEWYFHQNAGKVFEQDMGFLSSQNEILMKEKVPTKELYLNLRSSDTW 399
Query: 641 VAEYRKWMDKVGHGMPYHFGHSTISLPTEPAVVEHAPAGLVAGISASLPAKGGIGTMHAP 462
VAEYR+WMDKVGHGMPYHFGHSTISLP +PAVVEHAPAGLVAG+SAS PAKGGIGTMHAP
Sbjct: 400 VAEYRRWMDKVGHGMPYHFGHSTISLPQQPAVVEHAPAGLVAGLSASSPAKGGIGTMHAP 459
Query: 461 NLANRYFRHVIHCKECSNVVKAFQTWKNXXXXXXXXXXXXXXXXXARQWKTLLVVSSALC 282
N ANRYFRHV+HCK C +VVKAFQ WKN RQWK LL+V +AL
Sbjct: 460 NPANRYFRHVVHCKGCRSVVKAFQAWKNVFFTLALASTALAILVTGRQWKALLLVGTALS 519
Query: 281 LAGVHACSSAIALNTTNFIRVHRRL 207
LAG++ACS+ +A+NTTNF+R+HRRL
Sbjct: 520 LAGMYACSTVVAMNTTNFVRIHRRL 544
>ref|XP_003603276.1| Rieske iron-sulfur protein Tic55 [Medicago truncatula]
gi|355492324|gb|AES73527.1| Rieske iron-sulfur protein
Tic55 [Medicago truncatula]
Length = 552
Score = 822 bits (2122), Expect = 0.0
Identities = 397/564 (70%), Positives = 448/564 (79%)
Frame = -2
Query: 1898 MALLQPFISDPSHLKTLLPFTPLALNHTNSTTRRRNANELFISSPTILGLKVKLKQVRTR 1719
MAL+ PF+ P+ LP +P T SS L L R +
Sbjct: 1 MALVNPFLL-PTKTHFALPVSPPPSKQILLWTSP--------SSSFSFNLNKGLSSSRRK 51
Query: 1718 VSHQYSAVAQEFGGEVLTDEEKGEDYDVLLESNVDEKEKVENETVEYDWREEWYPLYLTQ 1539
+ A A L D E ED VL+ + +++ + E E YDW+EEWYPLYLT+
Sbjct: 52 HAGYLPATADVKTASTLLDVE--EDQKVLVGPSSEQERRGERELAAYDWKEEWYPLYLTK 109
Query: 1538 NLPDDAPLGLTVYDKQIVLYRDGNGDFQCYQDRCPHRLAKLSEGQLVDGRLECLYHGWQF 1359
N+PDDAPLGLTV+DK +VL++DGN FQCY+DRCPHRLAKLSEGQL+DGRLECLYHGWQF
Sbjct: 110 NVPDDAPLGLTVFDKNLVLFKDGNDQFQCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQF 169
Query: 1358 EGKGKCVKIPQLPSGAKIPRNACVKTYEVRDSQGVIWVWMSDKNPPNPEKLPWFENFARP 1179
EG+GKCVKIPQLP+ AKIPR+ACVKTYEVRDSQGVIWVWMS K PPN K+PWFENFARP
Sbjct: 170 EGEGKCVKIPQLPADAKIPRSACVKTYEVRDSQGVIWVWMSPKVPPNVSKIPWFENFARP 229
Query: 1178 GFQDISTTHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQALLFKVVERSNRGFA 999
GFQD+STTHELPYDHSILLENLMDPAH+PISHDRTDW+AKREDAQ LLF+V ER++RGFA
Sbjct: 230 GFQDVSTTHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLLFEVTERTDRGFA 289
Query: 998 GLWGREKDQTMPNYLRFDAPCVLQNNREIVDKNGEKHYSSGLFLCRPSGQGKSMLIVRFG 819
G WGREKD T PN+LRF+APCVLQNNREIVDKNGE +Y SGLFLCRP+GQGKSMLIVRFG
Sbjct: 290 GWWGREKDGTKPNFLRFEAPCVLQNNREIVDKNGEINYFSGLFLCRPTGQGKSMLIVRFG 349
Query: 818 GTRRSSPLAKLFPMWYFHQNAGKVFEQDMGFLSSQNEILVKEKLPTKELYINLRSSDTWV 639
GT+R SP+ KLFP WYFHQNA KVFEQDMGFLSSQNEIL+KEK+PTKELY+NL+SSDTWV
Sbjct: 350 GTKR-SPIVKLFPQWYFHQNASKVFEQDMGFLSSQNEILLKEKVPTKELYLNLKSSDTWV 408
Query: 638 AEYRKWMDKVGHGMPYHFGHSTISLPTEPAVVEHAPAGLVAGISASLPAKGGIGTMHAPN 459
AEYRKWMDKVGHGMPYHFGH+TISLP EPAV+EHAPAGL+AG+SAS PAKGGIGTMHAPN
Sbjct: 409 AEYRKWMDKVGHGMPYHFGHNTISLPKEPAVIEHAPAGLIAGLSASSPAKGGIGTMHAPN 468
Query: 458 LANRYFRHVIHCKECSNVVKAFQTWKNXXXXXXXXXXXXXXXXXARQWKTLLVVSSALCL 279
LANRYFRHVIHCK C VKAFQTWKN RQWK +L+ S+ALC
Sbjct: 469 LANRYFRHVIHCKGCRTAVKAFQTWKNALSAVVVALAALAILVTGRQWKAILLASAALCS 528
Query: 278 AGVHACSSAIALNTTNFIRVHRRL 207
GV+ACS+A+ALNTTNFIR HRRL
Sbjct: 529 VGVYACSTAVALNTTNFIRTHRRL 552
>sp|O49931.1|TIC55_PEA RecName: Full=Protein TIC 55, chloroplastic; AltName: Full=Rieske
iron-sulfur protein TIC55; AltName: Full=Translocon at
the inner envelope membrane of chloroplasts 55;
Short=PsTIC55; Flags: Precursor
gi|2764524|emb|CAA04157.1| Rieske iron-sulfur protein
Tic55 [Pisum sativum]
Length = 553
Score = 815 bits (2106), Expect = 0.0
Identities = 386/498 (77%), Positives = 427/498 (85%)
Frame = -2
Query: 1700 AVAQEFGGEVLTDEEKGEDYDVLLESNVDEKEKVENETVEYDWREEWYPLYLTQNLPDDA 1521
A A + L D E ED VL+ + +++ K E E +YDW EEWYPLYLT+N+P DA
Sbjct: 59 AAAADVKDATLLDGE--EDQKVLVGPSSEQERKGEREVADYDWTEEWYPLYLTKNVPHDA 116
Query: 1520 PLGLTVYDKQIVLYRDGNGDFQCYQDRCPHRLAKLSEGQLVDGRLECLYHGWQFEGKGKC 1341
PLGL VYDK IVL+RDGN FQCY+DRCPHRLAKLSEGQL+DGRLECLYHGWQFEG+GKC
Sbjct: 117 PLGLKVYDKNIVLFRDGNDQFQCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 176
Query: 1340 VKIPQLPSGAKIPRNACVKTYEVRDSQGVIWVWMSDKNPPNPEKLPWFENFARPGFQDIS 1161
VKIPQLP+ AKIP++ACVKTYEVRDSQGV+WVWMS K PPN K+PWFENFARPGFQDIS
Sbjct: 177 VKIPQLPADAKIPKSACVKTYEVRDSQGVLWVWMSRKTPPNVSKIPWFENFARPGFQDIS 236
Query: 1160 TTHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQALLFKVVERSNRGFAGLWGRE 981
TTHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQAL F+V ER++RGFAG WGRE
Sbjct: 237 TTHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQALGFEVTERTDRGFAGWWGRE 296
Query: 980 KDQTMPNYLRFDAPCVLQNNREIVDKNGEKHYSSGLFLCRPSGQGKSMLIVRFGGTRRSS 801
KD + PN+LRF+APCVLQNNREIVDKNGE ++ SGLFLCRP+GQGKSMLIVRFG T+R S
Sbjct: 297 KDGSKPNFLRFEAPCVLQNNREIVDKNGEINHFSGLFLCRPTGQGKSMLIVRFGATKR-S 355
Query: 800 PLAKLFPMWYFHQNAGKVFEQDMGFLSSQNEILVKEKLPTKELYINLRSSDTWVAEYRKW 621
PL KLFP WYFHQNA KVFEQDMGFLSSQNEIL+KEK+PTKELY+NL+SSDTWVAEYRKW
Sbjct: 356 PLIKLFPEWYFHQNASKVFEQDMGFLSSQNEILLKEKVPTKELYLNLKSSDTWVAEYRKW 415
Query: 620 MDKVGHGMPYHFGHSTISLPTEPAVVEHAPAGLVAGISASLPAKGGIGTMHAPNLANRYF 441
MDKVGHGMPYHFGHSTISLP EPAVVEHAPAGLVAG+SAS PAKGGIGTMHAPNLANRYF
Sbjct: 416 MDKVGHGMPYHFGHSTISLPEEPAVVEHAPAGLVAGLSASSPAKGGIGTMHAPNLANRYF 475
Query: 440 RHVIHCKECSNVVKAFQTWKNXXXXXXXXXXXXXXXXXARQWKTLLVVSSALCLAGVHAC 261
RHVIHCK CS+ +KAFQ WKN RQWK LL+ S++LC GV+AC
Sbjct: 476 RHVIHCKGCSSAIKAFQIWKNVLSGVVVALAALAILVSGRQWKVLLLASASLCSVGVYAC 535
Query: 260 SSAIALNTTNFIRVHRRL 207
S+AIA+NTTNFIRVHRRL
Sbjct: 536 STAIAMNTTNFIRVHRRL 553
>ref|XP_002515391.1| chlorophyll a oxygenase, putative [Ricinus communis]
gi|223545335|gb|EEF46840.1| chlorophyll a oxygenase,
putative [Ricinus communis]
Length = 552
Score = 801 bits (2070), Expect = 0.0
Identities = 384/553 (69%), Positives = 452/553 (81%), Gaps = 6/553 (1%)
Frame = -2
Query: 1847 LPFTPLALNHTNSTTRRRNANELFISS----PTILG--LKVKLKQVRTRVSHQYSAVAQE 1686
LPF L L+HT + T+ + L +S PTI LK L ++ R + Y+A +
Sbjct: 3 LPFH-LFLSHTTAITKSFPLSPLSSTSKPTTPTIKTHLLKPILHTLKIRHTKCYAA-SST 60
Query: 1685 FGGEVLTDEEKGEDYDVLLESNVDEKEKVENETVEYDWREEWYPLYLTQNLPDDAPLGLT 1506
E + + +D+ VL+ + +E+ + E +YDW EEWYPLYLT+++PDDAPLGLT
Sbjct: 61 VHDESRSGVVEADDHMVLVGPSSEEERRGERVVADYDWTEEWYPLYLTKDVPDDAPLGLT 120
Query: 1505 VYDKQIVLYRDGNGDFQCYQDRCPHRLAKLSEGQLVDGRLECLYHGWQFEGKGKCVKIPQ 1326
V+DKQIVLY+DG G+ +CY+DRCPHRLAKLSEGQL+DGRLECLYHGWQFEG+GKCVKIPQ
Sbjct: 121 VFDKQIVLYKDGEGELRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQ 180
Query: 1325 LPSGAKIPRNACVKTYEVRDSQGVIWVWMSDKNPPNPEKLPWFENFARPGFQDISTTHEL 1146
LP+ AKIP++ACVKTYE+R+SQGV+WVWMS K PPN KLPWFENFARPGFQD STTHEL
Sbjct: 181 LPTNAKIPQSACVKTYEIRESQGVVWVWMSRKTPPNLNKLPWFENFARPGFQDTSTTHEL 240
Query: 1145 PYDHSILLENLMDPAHVPISHDRTDWSAKREDAQALLFKVVERSNRGFAGLWGREKDQTM 966
PYDHSILLENLMDPAH+PISHDRTDWSAKREDAQAL FKV ER++RGFAG WGR+KD +
Sbjct: 241 PYDHSILLENLMDPAHIPISHDRTDWSAKREDAQALRFKVTERTDRGFAGWWGRDKDPAL 300
Query: 965 PNYLRFDAPCVLQNNREIVDKNGEKHYSSGLFLCRPSGQGKSMLIVRFGGTRRSSPLAKL 786
N+LRF+APCVLQNNR+IVD+NG KHY +GLFLCRP+GQGK+MLIVRFGGT+RS +AK
Sbjct: 301 LNFLRFEAPCVLQNNRDIVDENGVKHYFTGLFLCRPTGQGKAMLIVRFGGTKRSH-IAKW 359
Query: 785 FPMWYFHQNAGKVFEQDMGFLSSQNEILVKEKLPTKELYINLRSSDTWVAEYRKWMDKVG 606
P WYFHQNA KVFEQDMGFLSSQNE+L+KEK+PTK LY+NL+SSDTWVAEYRKWMDKVG
Sbjct: 360 IPQWYFHQNASKVFEQDMGFLSSQNEVLMKEKVPTKNLYLNLKSSDTWVAEYRKWMDKVG 419
Query: 605 HGMPYHFGHSTISLPTEPAVVEHAPAGLVAGISASLPAKGGIGTMHAPNLANRYFRHVIH 426
HGMPYHFGHSTISLP PAVVEHAPAGLVAG+SAS PAKGGIGTMHAPNL+NRYFRHVIH
Sbjct: 420 HGMPYHFGHSTISLPEVPAVVEHAPAGLVAGVSASSPAKGGIGTMHAPNLSNRYFRHVIH 479
Query: 425 CKECSNVVKAFQTWKNXXXXXXXXXXXXXXXXXARQWKTLLVVSSALCLAGVHACSSAIA 246
C++CS+VVK F+ WKN RQWK L++S+ LCLAGV+AC++AIA
Sbjct: 480 CRKCSSVVKGFEAWKNALSAIALVSTALAILASGRQWKPFLLLSAGLCLAGVYACTTAIA 539
Query: 245 LNTTNFIRVHRRL 207
+NTTNFIR HRRL
Sbjct: 540 MNTTNFIRTHRRL 552
>ref|XP_003522345.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine max]
Length = 532
Score = 799 bits (2064), Expect = 0.0
Identities = 374/480 (77%), Positives = 415/480 (86%)
Frame = -2
Query: 1646 DYDVLLESNVDEKEKVENETVEYDWREEWYPLYLTQNLPDDAPLGLTVYDKQIVLYRDGN 1467
D+ VL+ +E+ K + YDW +EWYPLYLTQN+P+DAPLGL V+DKQ+VL++DGN
Sbjct: 59 DHAVLVGPTSEEERKGD-----YDWTQEWYPLYLTQNVPEDAPLGLRVFDKQLVLFKDGN 113
Query: 1466 GDFQCYQDRCPHRLAKLSEGQLVDGRLECLYHGWQFEGKGKCVKIPQLPSGAKIPRNACV 1287
G F+CY+DRCPHRLAKLSEGQL+DGRLECLYHGWQFEG+GKCVKIPQLP+ AKIPR ACV
Sbjct: 114 GQFRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRAACV 173
Query: 1286 KTYEVRDSQGVIWVWMSDKNPPNPEKLPWFENFARPGFQDISTTHELPYDHSILLENLMD 1107
KTYEVRDSQGVIWVWMS K PPN KLPWFENFARPGFQD+ST HELPYDHSILLENLMD
Sbjct: 174 KTYEVRDSQGVIWVWMSLKTPPNVSKLPWFENFARPGFQDVSTIHELPYDHSILLENLMD 233
Query: 1106 PAHVPISHDRTDWSAKREDAQALLFKVVERSNRGFAGLWGREKDQTMPNYLRFDAPCVLQ 927
PAH+PISHDRTDW+AKREDAQ L F+V ER++RGFAG WGREKD +MPN+LRF+APCVLQ
Sbjct: 234 PAHIPISHDRTDWTAKREDAQPLCFEVTERTDRGFAGWWGREKDGSMPNFLRFEAPCVLQ 293
Query: 926 NNREIVDKNGEKHYSSGLFLCRPSGQGKSMLIVRFGGTRRSSPLAKLFPMWYFHQNAGKV 747
NNREIVDKNGE +Y SGLFLCRP+GQGKSMLIVRFGGT+R SPLAK+FP WYFHQNA KV
Sbjct: 294 NNREIVDKNGEINYFSGLFLCRPTGQGKSMLIVRFGGTKR-SPLAKVFPKWYFHQNASKV 352
Query: 746 FEQDMGFLSSQNEILVKEKLPTKELYINLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTIS 567
FEQDMGFLSSQNEIL++EK+PTKELY+NL+SSDTWVAEYRKWMDK GHGMPYHFGHSTIS
Sbjct: 353 FEQDMGFLSSQNEILLREKVPTKELYLNLKSSDTWVAEYRKWMDKAGHGMPYHFGHSTIS 412
Query: 566 LPTEPAVVEHAPAGLVAGISASLPAKGGIGTMHAPNLANRYFRHVIHCKECSNVVKAFQT 387
LP EPAVVEHAPAGLVAG SAS P KGGIGTMHAPN ANRYFRHVIHCK C VVKAF+
Sbjct: 413 LPKEPAVVEHAPAGLVAGQSASSPTKGGIGTMHAPNFANRYFRHVIHCKGCRTVVKAFEA 472
Query: 386 WKNXXXXXXXXXXXXXXXXXARQWKTLLVVSSALCLAGVHACSSAIALNTTNFIRVHRRL 207
WKN RQWK LL+ S+ALC GV+ACS+AIA+NTTNFIR HRRL
Sbjct: 473 WKNALSAVAIALTALAILLSGRQWKVLLLASAALCSVGVYACSTAIAMNTTNFIRTHRRL 532