BLASTX nr result

ID: Coptis24_contig00003988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003988
         (1712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282199.2| PREDICTED: cyclin-dependent kinase inhibitor...   103   1e-19
emb|CBI21439.3| unnamed protein product [Vitis vinifera]              103   1e-19
ref|XP_002518785.1| conserved hypothetical protein [Ricinus comm...    92   4e-16
ref|XP_002523560.1| conserved hypothetical protein [Ricinus comm...    91   7e-16
ref|NP_001238139.1| cyclin-dependent kinase inhibitor 1;2 [Glyci...    89   5e-15

>ref|XP_002282199.2| PREDICTED: cyclin-dependent kinase inhibitor 1-like [Vitis vinifera]
          Length = 227

 Score =  103 bits (258), Expect = 1e-19
 Identities = 51/82 (62%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
 Frame = -1

Query: 1517 RREKTPSSSLRQESDEQESMERPTSVS-RHRSMSEMKTPSEAEIDEFFSTAEKDEQRRFT 1341
            RRE TPSS LR ESD+ ES  RP+  + RHRS  E K PSE+E++EFF+ AEKD Q+RF+
Sbjct: 145  RRETTPSSELRAESDDLESTARPSEANYRHRSTVE-KMPSESELEEFFAAAEKDVQKRFS 203

Query: 1340 DKFNFDIRKDLPLKGRYEWVRL 1275
            +K+N+DI KD+P++GRYEWVRL
Sbjct: 204  EKYNYDIVKDVPMEGRYEWVRL 225


>emb|CBI21439.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score =  103 bits (258), Expect = 1e-19
 Identities = 51/82 (62%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
 Frame = -1

Query: 1517 RREKTPSSSLRQESDEQESMERPTSVS-RHRSMSEMKTPSEAEIDEFFSTAEKDEQRRFT 1341
            RRE TPSS LR ESD+ ES  RP+  + RHRS  E K PSE+E++EFF+ AEKD Q+RF+
Sbjct: 130  RRETTPSSELRAESDDLESTARPSEANYRHRSTVE-KMPSESELEEFFAAAEKDVQKRFS 188

Query: 1340 DKFNFDIRKDLPLKGRYEWVRL 1275
            +K+N+DI KD+P++GRYEWVRL
Sbjct: 189  EKYNYDIVKDVPMEGRYEWVRL 210


>ref|XP_002518785.1| conserved hypothetical protein [Ricinus communis]
            gi|223542166|gb|EEF43710.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 202

 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 45/82 (54%), Positives = 56/82 (68%)
 Frame = -1

Query: 1520 FRREKTPSSSLRQESDEQESMERPTSVSRHRSMSEMKTPSEAEIDEFFSTAEKDEQRRFT 1341
            F RE +PSSS   ++DE ES        R   +   K PS+ EIDEFF+ AEK EQ+RF 
Sbjct: 119  FSRETSPSSSFYGDTDEMESPAPVVKNCRKIRLPAEKVPSQVEIDEFFAEAEKKEQKRFA 178

Query: 1340 DKFNFDIRKDLPLKGRYEWVRL 1275
            DK+N+DI KDLPL+GRY+WVRL
Sbjct: 179  DKYNYDIVKDLPLEGRYQWVRL 200


>ref|XP_002523560.1| conserved hypothetical protein [Ricinus communis]
            gi|223537122|gb|EEF38755.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 219

 Score = 91.3 bits (225), Expect = 7e-16
 Identities = 46/86 (53%), Positives = 63/86 (73%), Gaps = 5/86 (5%)
 Frame = -1

Query: 1517 RREKTPSSSLRQE-SDEQESMERPTSVS----RHRSMSEMKTPSEAEIDEFFSTAEKDEQ 1353
            RRE TPSS + +E SDE +S  RP+++     R  S++  K P+E E+DEFF+ AE++ Q
Sbjct: 132  RRESTPSSEVGEELSDELDSTARPSAMEANSRRKPSLTVEKMPTETELDEFFAEAERNIQ 191

Query: 1352 RRFTDKFNFDIRKDLPLKGRYEWVRL 1275
            +RF DK+N+D+ KD PLKGRYEWVRL
Sbjct: 192  KRFADKYNYDVVKDEPLKGRYEWVRL 217


>ref|NP_001238139.1| cyclin-dependent kinase inhibitor 1;2 [Glycine max]
            gi|46844158|gb|AAS13375.1| cyclin-dependent kinase
            inhibitor 1;2 [Glycine max]
          Length = 198

 Score = 88.6 bits (218), Expect = 5e-15
 Identities = 45/82 (54%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
 Frame = -1

Query: 1517 RREKTPSSSLRQESDEQESMERPTSVSRHRSMSEMKT-PSEAEIDEFFSTAEKDEQRRFT 1341
            RRE   SS LR+ S E E ME    ++ HR++S+ K  P+E E +EFF  AEKD Q+RF 
Sbjct: 119  RREMKSSSELRENSQEPEPME----INSHRALSKAKAMPTELEXEEFFVAAEKDIQKRFQ 174

Query: 1340 DKFNFDIRKDLPLKGRYEWVRL 1275
            DK+N+DI KD+PL+GRYEWV+L
Sbjct: 175  DKYNYDIVKDVPLEGRYEWVQL 196


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