BLASTX nr result
ID: Coptis24_contig00003977
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00003977 (646 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACH87172.1| zinc finger protein LSD2-like protein [Camellia s... 114 2e-23 ref|XP_003529323.1| PREDICTED: protein LOL2-like [Glycine max] 100 2e-19 ref|XP_002519059.1| conserved hypothetical protein [Ricinus comm... 100 2e-19 ref|XP_002273964.1| PREDICTED: protein LOL2 [Vitis vinifera] gi|... 100 3e-19 ref|XP_004146601.1| PREDICTED: protein LOL2-like [Cucumis sativu... 93 4e-17 >gb|ACH87172.1| zinc finger protein LSD2-like protein [Camellia sinensis] Length = 236 Score = 114 bits (285), Expect = 2e-23 Identities = 68/187 (36%), Positives = 92/187 (49%), Gaps = 6/187 (3%) Frame = -2 Query: 636 DSPPPGWES---QKQEANSDSPPPPGFES---NENNTKNNSPSQKQSSTLVVVVDSNKKN 475 D PPPGW +K+E + D PPPG++S ++ T +P+ V N + Sbjct: 50 DGPPPGWTQIAVKKEEEDDDDGPPPGWQSIPPSQPPTITPAPTTPPPPPAVASGSGNAAH 109 Query: 474 YSPSQHSPLPPGSSPCQQHXXXXXXXXXXXXXXXXXSGIPTREVGQMICGVCRSLISYPK 295 Q P GS+ + E+GQM+CG C+ L+SYP+ Sbjct: 110 TQLQQQPPKQEGSAKAARTQLQQELPKQEAV-----------EMGQMVCGSCQELLSYPR 158 Query: 294 GAGRVKCPGCQTVNHVLEAQQVGLVKCGSCSVLLMYKYEXXXXXXXXXXXVTQIGVDNKR 115 GA V+C CQTVN+ LE +VG VKCG C+VLLMY Y VT+IG N+R Sbjct: 159 GARLVRCLCCQTVNYCLEEHEVGQVKCGGCAVLLMYPYGAPFVKCSSCCFVTEIGEHNRR 218 Query: 114 PLISVQQ 94 P +SVQQ Sbjct: 219 PPLSVQQ 225 >ref|XP_003529323.1| PREDICTED: protein LOL2-like [Glycine max] Length = 128 Score = 100 bits (249), Expect = 2e-19 Identities = 54/90 (60%), Positives = 59/90 (65%), Gaps = 2/90 (2%) Frame = -2 Query: 357 PTREVG--QMICGVCRSLISYPKGAGRVKCPGCQTVNHVLEAQQVGLVKCGSCSVLLMYK 184 P R G QM+CG CR L+SYP+GA VKC CQTVN VLEA QVG VKCGSC+VLLMY Sbjct: 29 PPRPSGWAQMVCGSCRRLLSYPRGAKHVKCSCCQTVNIVLEADQVGQVKCGSCAVLLMYP 88 Query: 183 YEXXXXXXXXXXXVTQIGVDNKRPLISVQQ 94 Y VT+IG NKRP SVQQ Sbjct: 89 YGASQVRCSSCRFVTEIGAHNKRPPWSVQQ 118 >ref|XP_002519059.1| conserved hypothetical protein [Ricinus communis] gi|223541722|gb|EEF43270.1| conserved hypothetical protein [Ricinus communis] Length = 142 Score = 100 bits (249), Expect = 2e-19 Identities = 48/93 (51%), Positives = 59/93 (63%) Frame = -2 Query: 357 PTREVGQMICGVCRSLISYPKGAGRVKCPGCQTVNHVLEAQQVGLVKCGSCSVLLMYKYE 178 P+ E+ QM+CG CR+L+SYP+GA V+C CQ VN VLEA +VG V CG C +LLMY Y Sbjct: 47 PSSEMAQMVCGSCRTLLSYPRGARHVQCSSCQMVNFVLEAHEVGQVNCGKCEILLMYPYP 106 Query: 177 XXXXXXXXXXXVTQIGVDNKRPLISVQQVHSPS 79 VT+IG NKRP SV Q H P+ Sbjct: 107 ASSVRCSSCCSVTEIGAHNKRPPWSVIQGHPPN 139 >ref|XP_002273964.1| PREDICTED: protein LOL2 [Vitis vinifera] gi|302144197|emb|CBI23324.3| unnamed protein product [Vitis vinifera] Length = 141 Score = 100 bits (248), Expect = 3e-19 Identities = 50/87 (57%), Positives = 59/87 (67%) Frame = -2 Query: 348 EVGQMICGVCRSLISYPKGAGRVKCPGCQTVNHVLEAQQVGLVKCGSCSVLLMYKYEXXX 169 E+ QM+CG CR L+SYP+G V+C CQTVN VLEA QVG VKCGSC+VLLMY Y Sbjct: 45 EMAQMVCGSCRRLLSYPQGTRHVECSCCQTVNFVLEAHQVGQVKCGSCAVLLMYPYGAPS 104 Query: 168 XXXXXXXXVTQIGVDNKRPLISVQQVH 88 VT+IGV N+R +SVQQ H Sbjct: 105 VRCSSCRFVTEIGVHNRRLPLSVQQGH 131 >ref|XP_004146601.1| PREDICTED: protein LOL2-like [Cucumis sativus] gi|449508900|ref|XP_004163439.1| PREDICTED: protein LOL2-like [Cucumis sativus] Length = 131 Score = 93.2 bits (230), Expect = 4e-17 Identities = 50/96 (52%), Positives = 60/96 (62%), Gaps = 1/96 (1%) Frame = -2 Query: 348 EVGQMICGVCRSLISYPKGAGRVKCPGCQTVNHVLEAQQVGLVKCGSCSVLLMYKYEXXX 169 ++ QM+CG CR L+ Y KGA V+C C TVN VLEA +VG VKCGSC+VLLMY Y Sbjct: 36 DMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASS 95 Query: 168 XXXXXXXXVTQIGVDNKRPLISVQQVH-SPSRNTVQ 64 VT+IGV N+RP SV Q +P N VQ Sbjct: 96 VRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ 131