BLASTX nr result

ID: Coptis24_contig00003977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003977
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACH87172.1| zinc finger protein LSD2-like protein [Camellia s...   114   2e-23
ref|XP_003529323.1| PREDICTED: protein LOL2-like [Glycine max]        100   2e-19
ref|XP_002519059.1| conserved hypothetical protein [Ricinus comm...   100   2e-19
ref|XP_002273964.1| PREDICTED: protein LOL2 [Vitis vinifera] gi|...   100   3e-19
ref|XP_004146601.1| PREDICTED: protein LOL2-like [Cucumis sativu...    93   4e-17

>gb|ACH87172.1| zinc finger protein LSD2-like protein [Camellia sinensis]
          Length = 236

 Score =  114 bits (285), Expect = 2e-23
 Identities = 68/187 (36%), Positives = 92/187 (49%), Gaps = 6/187 (3%)
 Frame = -2

Query: 636 DSPPPGWES---QKQEANSDSPPPPGFES---NENNTKNNSPSQKQSSTLVVVVDSNKKN 475
           D PPPGW     +K+E + D  PPPG++S   ++  T   +P+       V     N  +
Sbjct: 50  DGPPPGWTQIAVKKEEEDDDDGPPPGWQSIPPSQPPTITPAPTTPPPPPAVASGSGNAAH 109

Query: 474 YSPSQHSPLPPGSSPCQQHXXXXXXXXXXXXXXXXXSGIPTREVGQMICGVCRSLISYPK 295
               Q  P   GS+   +                        E+GQM+CG C+ L+SYP+
Sbjct: 110 TQLQQQPPKQEGSAKAARTQLQQELPKQEAV-----------EMGQMVCGSCQELLSYPR 158

Query: 294 GAGRVKCPGCQTVNHVLEAQQVGLVKCGSCSVLLMYKYEXXXXXXXXXXXVTQIGVDNKR 115
           GA  V+C  CQTVN+ LE  +VG VKCG C+VLLMY Y            VT+IG  N+R
Sbjct: 159 GARLVRCLCCQTVNYCLEEHEVGQVKCGGCAVLLMYPYGAPFVKCSSCCFVTEIGEHNRR 218

Query: 114 PLISVQQ 94
           P +SVQQ
Sbjct: 219 PPLSVQQ 225


>ref|XP_003529323.1| PREDICTED: protein LOL2-like [Glycine max]
          Length = 128

 Score =  100 bits (249), Expect = 2e-19
 Identities = 54/90 (60%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
 Frame = -2

Query: 357 PTREVG--QMICGVCRSLISYPKGAGRVKCPGCQTVNHVLEAQQVGLVKCGSCSVLLMYK 184
           P R  G  QM+CG CR L+SYP+GA  VKC  CQTVN VLEA QVG VKCGSC+VLLMY 
Sbjct: 29  PPRPSGWAQMVCGSCRRLLSYPRGAKHVKCSCCQTVNIVLEADQVGQVKCGSCAVLLMYP 88

Query: 183 YEXXXXXXXXXXXVTQIGVDNKRPLISVQQ 94
           Y            VT+IG  NKRP  SVQQ
Sbjct: 89  YGASQVRCSSCRFVTEIGAHNKRPPWSVQQ 118


>ref|XP_002519059.1| conserved hypothetical protein [Ricinus communis]
           gi|223541722|gb|EEF43270.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 142

 Score =  100 bits (249), Expect = 2e-19
 Identities = 48/93 (51%), Positives = 59/93 (63%)
 Frame = -2

Query: 357 PTREVGQMICGVCRSLISYPKGAGRVKCPGCQTVNHVLEAQQVGLVKCGSCSVLLMYKYE 178
           P+ E+ QM+CG CR+L+SYP+GA  V+C  CQ VN VLEA +VG V CG C +LLMY Y 
Sbjct: 47  PSSEMAQMVCGSCRTLLSYPRGARHVQCSSCQMVNFVLEAHEVGQVNCGKCEILLMYPYP 106

Query: 177 XXXXXXXXXXXVTQIGVDNKRPLISVQQVHSPS 79
                      VT+IG  NKRP  SV Q H P+
Sbjct: 107 ASSVRCSSCCSVTEIGAHNKRPPWSVIQGHPPN 139


>ref|XP_002273964.1| PREDICTED: protein LOL2 [Vitis vinifera]
           gi|302144197|emb|CBI23324.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score =  100 bits (248), Expect = 3e-19
 Identities = 50/87 (57%), Positives = 59/87 (67%)
 Frame = -2

Query: 348 EVGQMICGVCRSLISYPKGAGRVKCPGCQTVNHVLEAQQVGLVKCGSCSVLLMYKYEXXX 169
           E+ QM+CG CR L+SYP+G   V+C  CQTVN VLEA QVG VKCGSC+VLLMY Y    
Sbjct: 45  EMAQMVCGSCRRLLSYPQGTRHVECSCCQTVNFVLEAHQVGQVKCGSCAVLLMYPYGAPS 104

Query: 168 XXXXXXXXVTQIGVDNKRPLISVQQVH 88
                   VT+IGV N+R  +SVQQ H
Sbjct: 105 VRCSSCRFVTEIGVHNRRLPLSVQQGH 131


>ref|XP_004146601.1| PREDICTED: protein LOL2-like [Cucumis sativus]
           gi|449508900|ref|XP_004163439.1| PREDICTED: protein
           LOL2-like [Cucumis sativus]
          Length = 131

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 50/96 (52%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
 Frame = -2

Query: 348 EVGQMICGVCRSLISYPKGAGRVKCPGCQTVNHVLEAQQVGLVKCGSCSVLLMYKYEXXX 169
           ++ QM+CG CR L+ Y KGA  V+C  C TVN VLEA +VG VKCGSC+VLLMY Y    
Sbjct: 36  DMAQMVCGTCRRLLKYLKGARYVQCSCCSTVNFVLEAHEVGQVKCGSCAVLLMYPYGASS 95

Query: 168 XXXXXXXXVTQIGVDNKRPLISVQQVH-SPSRNTVQ 64
                   VT+IGV N+RP  SV Q   +P  N VQ
Sbjct: 96  VRCSSCTSVTEIGVHNRRPPWSVHQGQAAPPTNFVQ 131


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