BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003962
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871121.1| predicted protein [Arabidopsis lyrata subsp....   129   2e-28
ref|NP_680142.2| DEA(D/H)-box RNA helicase family protein [Arabi...   129   2e-28
emb|CBI18267.3| unnamed protein product [Vitis vinifera]              125   3e-27
ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica...   125   3e-27
ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...   125   5e-27

>ref|XP_002871121.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316958|gb|EFH47380.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1160

 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/72 (90%), Positives = 67/72 (93%)
 Frame = -1

Query: 216 SQAFARQKLIFQRAPPNIRKIVLATNMAEASITINDVVFVVDFGKAKETTYDALNNTPCL 37
           S A A Q+LIF+RAPPNIRKIVLATNMAEASITINDVVFVVD GKAKETTYDALNNTPCL
Sbjct: 580 SMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCL 639

Query: 36  LPSWISQAFARQ 1
           LPSWISQA ARQ
Sbjct: 640 LPSWISQASARQ 651


>ref|NP_680142.2| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
           gi|10178028|dbj|BAB11511.1| ATP-dependent RNA helicase
           A-like protein [Arabidopsis thaliana]
           gi|332003418|gb|AED90801.1| DEA(D/H)-box RNA helicase
           family protein [Arabidopsis thaliana]
          Length = 1161

 Score =  129 bits (324), Expect = 2e-28
 Identities = 65/72 (90%), Positives = 67/72 (93%)
 Frame = -1

Query: 216 SQAFARQKLIFQRAPPNIRKIVLATNMAEASITINDVVFVVDFGKAKETTYDALNNTPCL 37
           S A A Q+LIF+RAPPNIRKIVLATNMAEASITINDVVFVVD GKAKETTYDALNNTPCL
Sbjct: 579 SMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCL 638

Query: 36  LPSWISQAFARQ 1
           LPSWISQA ARQ
Sbjct: 639 LPSWISQASARQ 650


>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score =  125 bits (315), Expect = 3e-27
 Identities = 62/72 (86%), Positives = 66/72 (91%)
 Frame = -1

Query: 216 SQAFARQKLIFQRAPPNIRKIVLATNMAEASITINDVVFVVDFGKAKETTYDALNNTPCL 37
           S A + QKLIF++ PPN+RKIVLATNMAEASITINDVVFVVD GKAKETTYDALNNTPCL
Sbjct: 557 SMATSEQKLIFEKPPPNVRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCL 616

Query: 36  LPSWISQAFARQ 1
           LPSWISQA ARQ
Sbjct: 617 LPSWISQASARQ 628


>ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis
           vinifera]
          Length = 1136

 Score =  125 bits (315), Expect = 3e-27
 Identities = 62/72 (86%), Positives = 66/72 (91%)
 Frame = -1

Query: 216 SQAFARQKLIFQRAPPNIRKIVLATNMAEASITINDVVFVVDFGKAKETTYDALNNTPCL 37
           S A + QKLIF++ PPN+RKIVLATNMAEASITINDVVFVVD GKAKETTYDALNNTPCL
Sbjct: 557 SMATSEQKLIFEKPPPNVRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCL 616

Query: 36  LPSWISQAFARQ 1
           LPSWISQA ARQ
Sbjct: 617 LPSWISQASARQ 628


>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1161

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/72 (83%), Positives = 66/72 (91%)
 Frame = -1

Query: 216 SQAFARQKLIFQRAPPNIRKIVLATNMAEASITINDVVFVVDFGKAKETTYDALNNTPCL 37
           S A + QKLIF++ PPNIRK++LATNMAEASITIND+VFVVD GKAKETTYDALNNTPCL
Sbjct: 582 SMATSEQKLIFEKPPPNIRKVILATNMAEASITINDIVFVVDCGKAKETTYDALNNTPCL 641

Query: 36  LPSWISQAFARQ 1
           LPSWISQA ARQ
Sbjct: 642 LPSWISQASARQ 653