BLASTX nr result

ID: Coptis24_contig00003946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003946
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_849593.1| lipid-binding serum glycoprotein-like protein [...   146   2e-33
ref|NP_563724.1| lipid-binding serum glycoprotein-like protein [...   146   2e-33
gb|AAM65272.1| unknown [Arabidopsis thaliana]                         146   2e-33
ref|XP_002889530.1| hypothetical protein ARALYDRAFT_887673 [Arab...   145   3e-33
ref|XP_002272020.1| PREDICTED: putative BPI/LBP family protein A...   143   1e-32

>ref|NP_849593.1| lipid-binding serum glycoprotein-like protein [Arabidopsis
           thaliana] gi|332189651|gb|AEE27772.1| lipid-binding
           serum glycoprotein-like protein [Arabidopsis thaliana]
          Length = 349

 Score =  146 bits (368), Expect = 2e-33
 Identities = 67/114 (58%), Positives = 87/114 (76%)
 Frame = -1

Query: 516 NVLDANEIIPVACISVVISASGSVEISRNMLVGSVGLDDFTLSLKWSNIGKFHMSLIQSV 337
           NVLDAN++IPVACIS++I  SG++ +  N L GSV L+DF++SLKWSNIG  H+ L+Q +
Sbjct: 229 NVLDANQVIPVACISLMIRGSGALRVMGNNLGGSVSLEDFSMSLKWSNIGNLHLHLLQPI 288

Query: 336 VWTFLKTVATPYVNSRLKKGFPLPIVRGFTLQGADIAYDNSLITICSDVVFKDS 175
           VWT ++TV  PY N  L+KGFPLPI+ GFTLQ A+I    S IT+CSDV + DS
Sbjct: 289 VWTVIQTVFVPYANDHLEKGFPLPIMHGFTLQNAEIICSESEITVCSDVAYLDS 342


>ref|NP_563724.1| lipid-binding serum glycoprotein-like protein [Arabidopsis
           thaliana] gi|75264940|sp|Q9MAU5.1|Y1049_ARATH RecName:
           Full=Putative BPI/LBP family protein At1g04970; Flags:
           Precursor gi|7211993|gb|AAF40464.1|AC004809_22 ESTs
           gb|T76367 and gb|AA404955 come from this gene
           [Arabidopsis thaliana] gi|28393732|gb|AAO42277.1|
           unknown protein [Arabidopsis thaliana]
           gi|28973365|gb|AAO64007.1| unknown protein [Arabidopsis
           thaliana] gi|332189650|gb|AEE27771.1| lipid-binding
           serum glycoprotein-like protein [Arabidopsis thaliana]
          Length = 488

 Score =  146 bits (368), Expect = 2e-33
 Identities = 67/114 (58%), Positives = 87/114 (76%)
 Frame = -1

Query: 516 NVLDANEIIPVACISVVISASGSVEISRNMLVGSVGLDDFTLSLKWSNIGKFHMSLIQSV 337
           NVLDAN++IPVACIS++I  SG++ +  N L GSV L+DF++SLKWSNIG  H+ L+Q +
Sbjct: 368 NVLDANQVIPVACISLMIRGSGALRVMGNNLGGSVSLEDFSMSLKWSNIGNLHLHLLQPI 427

Query: 336 VWTFLKTVATPYVNSRLKKGFPLPIVRGFTLQGADIAYDNSLITICSDVVFKDS 175
           VWT ++TV  PY N  L+KGFPLPI+ GFTLQ A+I    S IT+CSDV + DS
Sbjct: 428 VWTVIQTVFVPYANDHLEKGFPLPIMHGFTLQNAEIICSESEITVCSDVAYLDS 481


>gb|AAM65272.1| unknown [Arabidopsis thaliana]
          Length = 488

 Score =  146 bits (368), Expect = 2e-33
 Identities = 67/114 (58%), Positives = 87/114 (76%)
 Frame = -1

Query: 516 NVLDANEIIPVACISVVISASGSVEISRNMLVGSVGLDDFTLSLKWSNIGKFHMSLIQSV 337
           NVLDAN++IPVACIS++I  SG++ +  N L GSV L+DF++SLKWSNIG  H+ L+Q +
Sbjct: 368 NVLDANQVIPVACISLMIRGSGALRVMGNNLGGSVSLEDFSMSLKWSNIGNLHLHLLQPI 427

Query: 336 VWTFLKTVATPYVNSRLKKGFPLPIVRGFTLQGADIAYDNSLITICSDVVFKDS 175
           VWT ++TV  PY N  L+KGFPLPI+ GFTLQ A+I    S IT+CSDV + DS
Sbjct: 428 VWTVIQTVFVPYANDHLEKGFPLPIMHGFTLQNAEIICSESEITVCSDVAYLDS 481


>ref|XP_002889530.1| hypothetical protein ARALYDRAFT_887673 [Arabidopsis lyrata subsp.
           lyrata] gi|297335372|gb|EFH65789.1| hypothetical protein
           ARALYDRAFT_887673 [Arabidopsis lyrata subsp. lyrata]
          Length = 501

 Score =  145 bits (366), Expect = 3e-33
 Identities = 66/114 (57%), Positives = 88/114 (77%)
 Frame = -1

Query: 516 NVLDANEIIPVACISVVISASGSVEISRNMLVGSVGLDDFTLSLKWSNIGKFHMSLIQSV 337
           NVLDA+++IPVACIS++I  SG++ +  N L GSV L+DF++SLKWSNIG  H+ L+Q +
Sbjct: 368 NVLDASQVIPVACISLMIRGSGALRVMGNNLGGSVSLEDFSMSLKWSNIGNLHLHLLQPI 427

Query: 336 VWTFLKTVATPYVNSRLKKGFPLPIVRGFTLQGADIAYDNSLITICSDVVFKDS 175
           VWT ++TV  PY N  L+KGFPLPI+ GFTLQ A+I   +S IT+CSDV + DS
Sbjct: 428 VWTVIQTVFVPYANDHLEKGFPLPIIHGFTLQNAEIICSSSEITVCSDVAYLDS 481


>ref|XP_002272020.1| PREDICTED: putative BPI/LBP family protein At3g20270 [Vitis
           vinifera] gi|297739241|emb|CBI28892.3| unnamed protein
           product [Vitis vinifera]
          Length = 498

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/117 (59%), Positives = 89/117 (76%)
 Frame = -1

Query: 516 NVLDANEIIPVACISVVISASGSVEISRNMLVGSVGLDDFTLSLKWSNIGKFHMSLIQSV 337
           +VL++ E+IPVACIS+VI ASGSV+I+ N L GSV L+DFT+SLKWS IG   M LIQ V
Sbjct: 368 DVLESQEVIPVACISLVIHASGSVKIAGNNLAGSVKLNDFTMSLKWSKIGNLRMFLIQPV 427

Query: 336 VWTFLKTVATPYVNSRLKKGFPLPIVRGFTLQGADIAYDNSLITICSDVVFKDSYSL 166
           +WT ++TV  PYVN  L KGFPLPI+ GFTLQ A+I    S IT+CS+V ++D  +L
Sbjct: 428 IWTLIETVFLPYVNVHLGKGFPLPIIHGFTLQNAEIICSYSKITVCSNVAYEDPQNL 484


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