BLASTX nr result
ID: Coptis24_contig00003941
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00003941 (224 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAC23052.1| putative lipid transfer protein [Solanum tuberosum] 67 1e-09 ref|XP_002279379.2| PREDICTED: non-specific lipid-transfer prote... 65 4e-09 ref|XP_003631218.1| PREDICTED: probable non-specific lipid-trans... 65 4e-09 gb|ACM78621.1| non-specific lipid-transfer protein type 2 [Tamar... 65 6e-09 ref|XP_002301735.1| predicted protein [Populus trichocarpa] gi|2... 64 2e-08 >dbj|BAC23052.1| putative lipid transfer protein [Solanum tuberosum] Length = 93 Score = 67.4 bits (163), Expect = 1e-09 Identities = 30/57 (52%), Positives = 41/57 (71%) Frame = +2 Query: 53 SYMTILFALFLIMSFANLSMAATCDATQLSPCLGAITSGSPPSPACCTRLKSQRSCL 223 S + +L L L++ A++S+A TC A QLSPCLGAITS S PS CC+R++ Q+ CL Sbjct: 5 SKLAVLTVLVLLLVEAHISVAVTCSAIQLSPCLGAITSNSAPSTLCCSRIREQKPCL 61 >ref|XP_002279379.2| PREDICTED: non-specific lipid-transfer protein 2-like [Vitis vinifera] Length = 92 Score = 65.5 bits (158), Expect = 4e-09 Identities = 26/57 (45%), Positives = 42/57 (73%) Frame = +2 Query: 53 SYMTILFALFLIMSFANLSMAATCDATQLSPCLGAITSGSPPSPACCTRLKSQRSCL 223 SY+ + L L+++ A++++A TC T+LS C+GAITS +PPS CC+++K Q+ CL Sbjct: 4 SYIAVCAVLVLLLAEAHITVAVTCSPTELSSCVGAITSSTPPSKLCCSKIKEQKPCL 60 >ref|XP_003631218.1| PREDICTED: probable non-specific lipid-transfer protein AKCS9-like [Vitis vinifera] Length = 92 Score = 65.5 bits (158), Expect = 4e-09 Identities = 29/57 (50%), Positives = 37/57 (64%) Frame = +2 Query: 53 SYMTILFALFLIMSFANLSMAATCDATQLSPCLGAITSGSPPSPACCTRLKSQRSCL 223 SY+ + FAL L+ A +S A TC +LS C AI S SPP+ CC++LK QRSCL Sbjct: 4 SYIAVCFALLLLFGEAQVSTAVTCSPMELSTCANAIISSSPPTATCCSKLKEQRSCL 60 >gb|ACM78621.1| non-specific lipid-transfer protein type 2 [Tamarix hispida] Length = 92 Score = 65.1 bits (157), Expect = 6e-09 Identities = 27/57 (47%), Positives = 38/57 (66%) Frame = +2 Query: 53 SYMTILFALFLIMSFANLSMAATCDATQLSPCLGAITSGSPPSPACCTRLKSQRSCL 223 SY + + L++S +S A TC QLSPC+GAITS SPPS CC++++ Q+ CL Sbjct: 4 SYAAVFAVVMLLLSQTQVSTAVTCSPAQLSPCVGAITSSSPPSGLCCSKVRQQKPCL 60 >ref|XP_002301735.1| predicted protein [Populus trichocarpa] gi|222843461|gb|EEE81008.1| predicted protein [Populus trichocarpa] Length = 94 Score = 63.5 bits (153), Expect = 2e-08 Identities = 26/56 (46%), Positives = 39/56 (69%) Frame = +2 Query: 56 YMTILFALFLIMSFANLSMAATCDATQLSPCLGAITSGSPPSPACCTRLKSQRSCL 223 +M ++ ++++ A +S A TC+ QLSPCLGAI S +PPS CC++LK Q+ CL Sbjct: 7 FMIVMVVATMLLAEAQVSQAQTCNPGQLSPCLGAIMSSTPPSTTCCSKLKEQKPCL 62