BLASTX nr result

ID: Coptis24_contig00003941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003941
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC23052.1| putative lipid transfer protein [Solanum tuberosum]    67   1e-09
ref|XP_002279379.2| PREDICTED: non-specific lipid-transfer prote...    65   4e-09
ref|XP_003631218.1| PREDICTED: probable non-specific lipid-trans...    65   4e-09
gb|ACM78621.1| non-specific lipid-transfer protein type 2 [Tamar...    65   6e-09
ref|XP_002301735.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08

>dbj|BAC23052.1| putative lipid transfer protein [Solanum tuberosum]
          Length = 93

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/57 (52%), Positives = 41/57 (71%)
 Frame = +2

Query: 53  SYMTILFALFLIMSFANLSMAATCDATQLSPCLGAITSGSPPSPACCTRLKSQRSCL 223
           S + +L  L L++  A++S+A TC A QLSPCLGAITS S PS  CC+R++ Q+ CL
Sbjct: 5   SKLAVLTVLVLLLVEAHISVAVTCSAIQLSPCLGAITSNSAPSTLCCSRIREQKPCL 61


>ref|XP_002279379.2| PREDICTED: non-specific lipid-transfer protein 2-like [Vitis
           vinifera]
          Length = 92

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 26/57 (45%), Positives = 42/57 (73%)
 Frame = +2

Query: 53  SYMTILFALFLIMSFANLSMAATCDATQLSPCLGAITSGSPPSPACCTRLKSQRSCL 223
           SY+ +   L L+++ A++++A TC  T+LS C+GAITS +PPS  CC+++K Q+ CL
Sbjct: 4   SYIAVCAVLVLLLAEAHITVAVTCSPTELSSCVGAITSSTPPSKLCCSKIKEQKPCL 60


>ref|XP_003631218.1| PREDICTED: probable non-specific lipid-transfer protein AKCS9-like
           [Vitis vinifera]
          Length = 92

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/57 (50%), Positives = 37/57 (64%)
 Frame = +2

Query: 53  SYMTILFALFLIMSFANLSMAATCDATQLSPCLGAITSGSPPSPACCTRLKSQRSCL 223
           SY+ + FAL L+   A +S A TC   +LS C  AI S SPP+  CC++LK QRSCL
Sbjct: 4   SYIAVCFALLLLFGEAQVSTAVTCSPMELSTCANAIISSSPPTATCCSKLKEQRSCL 60


>gb|ACM78621.1| non-specific lipid-transfer protein type 2 [Tamarix hispida]
          Length = 92

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 27/57 (47%), Positives = 38/57 (66%)
 Frame = +2

Query: 53  SYMTILFALFLIMSFANLSMAATCDATQLSPCLGAITSGSPPSPACCTRLKSQRSCL 223
           SY  +   + L++S   +S A TC   QLSPC+GAITS SPPS  CC++++ Q+ CL
Sbjct: 4   SYAAVFAVVMLLLSQTQVSTAVTCSPAQLSPCVGAITSSSPPSGLCCSKVRQQKPCL 60


>ref|XP_002301735.1| predicted protein [Populus trichocarpa] gi|222843461|gb|EEE81008.1|
           predicted protein [Populus trichocarpa]
          Length = 94

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/56 (46%), Positives = 39/56 (69%)
 Frame = +2

Query: 56  YMTILFALFLIMSFANLSMAATCDATQLSPCLGAITSGSPPSPACCTRLKSQRSCL 223
           +M ++    ++++ A +S A TC+  QLSPCLGAI S +PPS  CC++LK Q+ CL
Sbjct: 7   FMIVMVVATMLLAEAQVSQAQTCNPGQLSPCLGAIMSSTPPSTTCCSKLKEQKPCL 62


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