BLASTX nr result

ID: Coptis24_contig00003902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003902
         (1939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29259.3| unnamed protein product [Vitis vinifera]              191   5e-46
ref|XP_004152163.1| PREDICTED: uncharacterized protein LOC101205...   181   5e-43
ref|XP_002326747.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-41
emb|CAN81032.1| hypothetical protein VITISV_011005 [Vitis vinife...   174   6e-41
ref|XP_003522853.1| PREDICTED: uncharacterized protein LOC100804...   166   2e-38

>emb|CBI29259.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score =  191 bits (486), Expect = 5e-46
 Identities = 137/355 (38%), Positives = 176/355 (49%), Gaps = 64/355 (18%)
 Frame = +1

Query: 148  KKIEKRSAEKRS-AKKVPS----DLVASASVAP-----VLMDATRDVAQGKLEKV---GN 288
            KKIEK+S++K+   KK+      D+  S++  P        +AT   A  K EK    GN
Sbjct: 55   KKIEKKSSKKKKKVKKINEASALDIGPSSTSTPNTTIIASSNATPPNASNKGEKKKEKGN 114

Query: 289  SEKLPGFIFMCNGQTKSDCYQYRVFGLSSGKLDVVERIKEGTXXXXXXXXXXXXYGIYKA 468
             E + GFIFMCNG+TK  CYQYRVFGL +G+ + V +IK GT            YGIY+A
Sbjct: 115  EEWVFGFIFMCNGKTKPQCYQYRVFGLPTGRKEEVAKIKVGTKLFLFDFDLKLLYGIYEA 174

Query: 469  TSSGQRDLEPSAFGGRFSAQVRFKISKDCLPLPEKQFKHAIQENYEGYSKFKQELSNRQV 648
            +S GQ +LE  AF G+F AQV+FKI K+CLPL E  FK+AI++NYEG SKF+ EL+ +QV
Sbjct: 175  SSKGQMNLEQDAFNGKFPAQVKFKIWKECLPLSEGAFKNAIRDNYEG-SKFRPELTKKQV 233

Query: 649  RKLIELFRPITLP-PSGQAPRPPPKVDLQHRNPPPDSGDRFQWPVRLPPHESGY------ 807
            + LI LFRPI +P P+  AP       L H  P P   ++F+    LPP E  Y      
Sbjct: 234  KALISLFRPINVPLPTSVAPLGSNVAPL-HSFPAPLVEEQFRPSAGLPPLEDPYLPGVQH 292

Query: 808  -----------------ATESHIVRVPPPL--------------------EARYGHPASL 876
                             +   H     PP                     E R     +L
Sbjct: 293  THGPLVLHPRSAQVVSSSLYDHYGATAPPSSVYDHYEAAPSVARVQASIEEPRVVRQTTL 352

Query: 877  PSQSGTYY-AEPPQPYMPENPASHAQDPYSRYRTVPEVVHR------ERESEIYH 1020
            P  +  YY    PQ Y+ E P S  Q PY RY T PE+V R      ERE  + H
Sbjct: 353  PHHTDPYYCTAAPQTYLTEKPVSSTQYPYRRYVTAPEMVRRDHPVGYEREYRVSH 407


>ref|XP_004152163.1| PREDICTED: uncharacterized protein LOC101205772 [Cucumis sativus]
            gi|449484784|ref|XP_004156978.1| PREDICTED:
            uncharacterized protein LOC101229134 [Cucumis sativus]
          Length = 482

 Score =  181 bits (460), Expect = 5e-43
 Identities = 118/332 (35%), Positives = 158/332 (47%), Gaps = 40/332 (12%)
 Frame = +1

Query: 118  HAENSGQTVKKKIEKRSAEKRSAKKVP----SDLVASASVAPVLMDATRDVAQGKLEKVG 285
            H++     + KK + R   K S   V      DLV   + A +         Q K EKV 
Sbjct: 38   HSKKGANELIKKKKSRKMSKASILNVGYTTIEDLVNGPTCASISTSIPPGNDQKKHEKVE 97

Query: 286  NSEKLPGFIFMCNGQTKSDCYQYRVFGLSSGKLDVVERIKEGTXXXXXXXXXXXXYGIYK 465
             ++   GFIFMCNG+TK +CYQYRVFGL  GK++VV+ I   T            YGIY+
Sbjct: 98   GNKGTSGFIFMCNGKTKPECYQYRVFGLPKGKIEVVKNINSDTKLFLFDIDLKLLYGIYQ 157

Query: 466  ATSSGQRDLEPSAFGGRFSAQVRFKISKDCLPLPEKQFKHAIQENYEGYSKFKQELSNRQ 645
            AT +G  DLEP+AF G+F AQV+F+I KDCLPL E  FKHAI++NY+G+ KFKQELS+ Q
Sbjct: 158  ATGNGALDLEPTAFNGQFQAQVKFEIFKDCLPLHENAFKHAIKDNYDGHRKFKQELSSTQ 217

Query: 646  VRKLIELFRPITLPPSGQAPRPPPKVDLQHRNPPPDSGDRFQ-WPVRLP----------- 789
            V++LI LFRPI      +     P V +Q       + +  + +P+  P           
Sbjct: 218  VKRLISLFRPIPKKSFAKRSDIRPNVGIQSSFKSARTQEAVKSYPLEKPLFGVHCLPILE 277

Query: 790  -------------------PHESGY-ATESHIVRVPPPLE----ARYGHPASLPSQSGTY 897
                               P E G+  ++SH    P  L      R+  P   P     Y
Sbjct: 278  TGPQHDVHHGHDIHQGKYNPFEPGFHVSQSHSQLQPRLLRTDGPTRHFEPYHHPRPFEPY 337

Query: 898  YAEPPQPYMPENPASHAQDPYSRYRTVPEVVH 993
            + E  Q Y PE    H  + Y+  R   E  H
Sbjct: 338  HPEQAQAYFPEGSFRHPPESYASIRNTNETNH 369


>ref|XP_002326747.1| predicted protein [Populus trichocarpa] gi|222834069|gb|EEE72546.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  176 bits (447), Expect = 2e-41
 Identities = 104/238 (43%), Positives = 130/238 (54%), Gaps = 5/238 (2%)
 Frame = +1

Query: 271 LEKVGNSEKLPGFIFMCNGQTKSDCYQYRVFGLSSGKLDVVERIKEGTXXXXXXXXXXXX 450
           +E+  + EK+ GFIF+CNG+TK +CY+YRVFGL  G LD+VE+IK GT            
Sbjct: 15  MERNESDEKITGFIFLCNGETKPECYRYRVFGLPRGNLDIVEKIKPGTKLFLFDFGMKRL 74

Query: 451 YGIYKATSSGQRDLEPSAFGGRFSAQVRFKISKDCLPLPEKQFKHAIQENYEGYSKFKQE 630
           YGIY A S G  +LEP+AF G+F AQVRFKI  DCLPL E   KHAI++NY+G SKF+QE
Sbjct: 75  YGIYTAISRGGMNLEPAAFNGKFPAQVRFKIVSDCLPLAESALKHAIKDNYQG-SKFRQE 133

Query: 631 LSNRQVRKLIELFRPITLPPSGQAPRPPPKVDLQHRNPPPDSGDRFQWPVRLPPHESGYA 810
           LS  QV+ L+ LFRPI LPPS         V   H  P   + +R     R  P+     
Sbjct: 134 LSTEQVKTLVSLFRPIDLPPSISVVPIVANVAPAHAFPSAITVERVLPSAR--PYSLYLP 191

Query: 811 TESHIVRVP-----PPLEARYGHPASLPSQSGTYYAEPPQPYMPENPASHAQDPYSRY 969
             +H   +P     P     Y H  +LP  +  Y AE PQ            DP  RY
Sbjct: 192 GATHPRTLPGGWVQPTKHLHYVHQNTLPQSNQKYSAEAPQ---------STYDPQRRY 240


>emb|CAN81032.1| hypothetical protein VITISV_011005 [Vitis vinifera]
            gi|296082267|emb|CBI21272.3| unnamed protein product
            [Vitis vinifera]
          Length = 468

 Score =  174 bits (442), Expect = 6e-41
 Identities = 127/344 (36%), Positives = 168/344 (48%), Gaps = 57/344 (16%)
 Frame = +1

Query: 154  IEKRSAEKRSAKKVPSDLVASASVAPVLMDATRD-----------VAQGKLEKVGNSE-- 294
            IE+R A+K+  K   S + A++  APV                  +A G L  +   E  
Sbjct: 14   IERRFAKKK--KLEASQINANSMFAPVTTSVYHSHVPTSASCLAPIANGGLSAMQEKETV 71

Query: 295  ---KLPGFIFMCNGQTKSDCYQYRVFGLSSGKLDVVERIKEGTXXXXXXXXXXXXYGIYK 465
               +L G+IFMCNG+TK DC++YRVFGL + ++DVV +IK  T            YG++ 
Sbjct: 72   GGNQLAGYIFMCNGKTKPDCFKYRVFGLPAARIDVVAKIKPSTILFLFDFNLKILYGVFV 131

Query: 466  ATSSGQRDLEPSAFGGRFSAQVRFKISKDCLPLPEKQFKHAIQENYEGYSKFKQELSNRQ 645
            A S+G   LEP AFGG+FSAQVRF+I KDCLPLPE  FKH I++NY+G+ KF+QELSN+Q
Sbjct: 132  AASNGILGLEPRAFGGKFSAQVRFEIFKDCLPLPEIDFKHVIKDNYQGHCKFRQELSNKQ 191

Query: 646  VRKLIELFR--------------PITLPPSGQAP-------RPPPKVD--------LQHR 738
            V  LI LFR              P T+PP+   P         PP  +        L   
Sbjct: 192  VNDLIPLFRTVAARQPAPVAPLIPNTVPPTRTLPPGFYEQRTLPPGFEEHVQLHQILHSS 251

Query: 739  NPPPDSGDRFQWPVRLPPHESG------YATESHIVRVP-----PPLEARYGHPASLPSQ 885
            N    +G +F      P  + G       A E H    P     P +++++   A     
Sbjct: 252  NDQSVAGLQFTPAGLAPAVQHGQQAVTPLAYEPHGSAAPEACFQPSVQSQHFLSADQQPY 311

Query: 886  SGTYYAEP-PQPYMPENPASHAQDPYSRYRTVPEVVHRERESEI 1014
            S  YY E   Q Y PENP+   Q P +RY  V E      ESEI
Sbjct: 312  SNPYYPEEGHQSYFPENPSLPPQAPCNRYAAVQE----NSESEI 351


>ref|XP_003522853.1| PREDICTED: uncharacterized protein LOC100804883 [Glycine max]
          Length = 540

 Score =  166 bits (421), Expect = 2e-38
 Identities = 120/315 (38%), Positives = 151/315 (47%), Gaps = 13/315 (4%)
 Frame = +1

Query: 124  ENSGQTVKKKIEK----RSAEKRSAKKVPSDLVASASVAPVLMDATRDVAQGKLEKVGNS 291
            ENS +  K KI K       +K   K   SD  A + +             G++E   +S
Sbjct: 124  ENSHRAEKNKIIKVDKSEQKQKNKEKHTESDKGAGSRI--------NRTKHGRVENTVSS 175

Query: 292  EKL----PGFIFMCNGQTKSDCYQYRVFGLSSGKLDVVERIKEGTXXXXXXXXXXXXYGI 459
            EK      GFIFMC+ +TK DC++YRV G+S+ K D+V  I  GT            YGI
Sbjct: 176  EKKRGKPSGFIFMCSAKTKPDCFRYRVMGVSATKKDIVLSINPGTKLFLYDFDLRLLYGI 235

Query: 460  YKATSSGQRDLEPSAFGGRFSAQVRFKISKDCLPLPEKQFKHAIQENYEGYSKFKQELSN 639
            YKA+SSG   LEP AFGG F AQVRFKI+ DC PLPE  FK AIQENY    KFK EL+ 
Sbjct: 236  YKASSSGGMKLEPRAFGGNFPAQVRFKIASDCFPLPESIFKKAIQENYNEKHKFKTELTA 295

Query: 640  RQVRKLIELFRPITLPPSGQAPRPPPKVDLQHRNPPPDSGDRFQWPVRLPPHESGYATES 819
            RQVRKL ELFRP+ +    Q  R PP+  +  R+     G R  W              S
Sbjct: 296  RQVRKLTELFRPVDVHSGLQPVRSPPRAIIHDRDAL--DGVRGSW--------------S 339

Query: 820  HIVRV-PPPLEARYGHPASLPSQSGTYYAEPPQ----PYMPENPASHAQDPYSRYRTVPE 984
            H+ R   P +E +   P  L     +Y A   Q      +P +  +   DPY R     E
Sbjct: 340  HLHRERDPQIERQEEIPRDLFLTEKSYRAYGLQGDRRNVIPASQVNPTLDPYERDY---E 396

Query: 985  VVHRERESEIYHRSV 1029
              H      +YH +V
Sbjct: 397  REHLHHVDTLYHTNV 411


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