BLASTX nr result

ID: Coptis24_contig00003889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00003889
         (1890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241154.1| uncharacterized protein LOC100777895 [Glycin...    61   1e-06
ref|XP_002264722.1| PREDICTED: uncharacterized protein LOC100261...    60   2e-06
emb|CAN62068.1| hypothetical protein VITISV_035260 [Vitis vinifera]    59   6e-06

>ref|NP_001241154.1| uncharacterized protein LOC100777895 [Glycine max]
            gi|255626341|gb|ACU13515.1| unknown [Glycine max]
            gi|255634813|gb|ACU17767.1| unknown [Glycine max]
          Length = 173

 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 13/66 (19%)
 Frame = -3

Query: 1882 KKKKRSGERATIIRRTPLQKP*FLTK-------------TAFLLTWLCLGSLIIIEGLAL 1742
            KKKK   ERA+IIRR+PL+KP F+++             +AFLL WL  G +I++EG+AL
Sbjct: 63   KKKKAQRERASIIRRSPLEKPAFVSEQQVGKAKEENKNESAFLLAWLGFGVVILVEGIAL 122

Query: 1741 AASGYI 1724
            AASG++
Sbjct: 123  AASGFL 128


>ref|XP_002264722.1| PREDICTED: uncharacterized protein LOC100261162 [Vitis vinifera]
            gi|296084154|emb|CBI24542.3| unnamed protein product
            [Vitis vinifera]
          Length = 175

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 13/66 (19%)
 Frame = -3

Query: 1882 KKKKRSGERATIIRRTPLQKP*FL-------------TKTAFLLTWLCLGSLIIIEGLAL 1742
            KK+K   ERA+IIRR+P+QKP FL              ++AFLL WL LG +I++EG+ L
Sbjct: 65   KKEKGRRERASIIRRSPVQKPEFLGVEEQGESKEQGRNESAFLLAWLGLGGIILVEGIVL 124

Query: 1741 AASGYI 1724
            AASG++
Sbjct: 125  AASGFL 130


>emb|CAN62068.1| hypothetical protein VITISV_035260 [Vitis vinifera]
          Length = 132

 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 13/64 (20%)
 Frame = -3

Query: 1882 KKKKRSGERATIIRRTPLQKP*FL-------------TKTAFLLTWLCLGSLIIIEGLAL 1742
            KK+K   ERA+IIRR+P+QKP FL              ++AFLL WL LG +I++EG+ L
Sbjct: 65   KKEKGRRERASIIRRSPVQKPEFLGVEEQGESKEQGRNESAFLLAWLGLGGIILVEGIVL 124

Query: 1741 AASG 1730
            AASG
Sbjct: 125  AASG 128


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